BLASTX nr result

ID: Chrysanthemum21_contig00005229 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00005229
         (516 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021984371.1| regulator of telomere elongation helicase 1 ...    56   5e-06
ref|XP_021984369.1| regulator of telomere elongation helicase 1 ...    56   5e-06
ref|XP_023730407.1| regulator of telomere elongation helicase 1 ...    56   5e-06
gb|KVI06000.1| hypothetical protein Ccrd_015675 [Cynara carduncu...    56   5e-06
ref|XP_019192957.1| PREDICTED: regulator of telomere elongation ...    56   7e-06

>ref|XP_021984371.1| regulator of telomere elongation helicase 1 isoform X2 [Helianthus
           annuus]
          Length = 988

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 26/36 (72%), Positives = 29/36 (80%)
 Frame = +1

Query: 307 GVKTAIINTSTIWERICQHKLPVV*PRQSSLFPKAI 414
           G  T   N+STIWERIC+HK PVV PRQSSLFP+AI
Sbjct: 539 GASTNTSNSSTIWERICKHKRPVVEPRQSSLFPEAI 574


>ref|XP_021984369.1| regulator of telomere elongation helicase 1 isoform X1 [Helianthus
           annuus]
 ref|XP_021984370.1| regulator of telomere elongation helicase 1 isoform X1 [Helianthus
           annuus]
 gb|OTG16787.1| putative RAD3-like DNA-binding helicase protein [Helianthus annuus]
          Length = 989

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 26/36 (72%), Positives = 29/36 (80%)
 Frame = +1

Query: 307 GVKTAIINTSTIWERICQHKLPVV*PRQSSLFPKAI 414
           G  T   N+STIWERIC+HK PVV PRQSSLFP+AI
Sbjct: 540 GASTNTSNSSTIWERICKHKRPVVEPRQSSLFPEAI 575


>ref|XP_023730407.1| regulator of telomere elongation helicase 1 homolog [Lactuca
           sativa]
 gb|PLY76498.1| hypothetical protein LSAT_4X103661 [Lactuca sativa]
          Length = 1005

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = +1

Query: 328 NTSTIWERICQHKLPVV*PRQSSLFPKAI 414
           N+STIWERIC+HKLPVV PRQSSLFP+AI
Sbjct: 550 NSSTIWERICKHKLPVVEPRQSSLFPQAI 578


>gb|KVI06000.1| hypothetical protein Ccrd_015675 [Cynara cardunculus var. scolymus]
          Length = 1023

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = +1

Query: 328 NTSTIWERICQHKLPVV*PRQSSLFPKAI 414
           N+STIWERIC+HKLPVV PRQSSLFP+AI
Sbjct: 628 NSSTIWERICKHKLPVVEPRQSSLFPQAI 656


>ref|XP_019192957.1| PREDICTED: regulator of telomere elongation helicase 1 [Ipomoea
           nil]
          Length = 1017

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = +1

Query: 328 NTSTIWERICQHKLPVV*PRQSSLFPKAI 414
           N+STIWERIC+HKLPVV PRQSSLFP AI
Sbjct: 554 NSSTIWERICKHKLPVVEPRQSSLFPSAI 582


Top