BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00005223
         (693 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH99257.1| BSD-like protein [Cynara cardunculus var. scolymus]    181   4e-55
ref|XP_022039572.1| probable RNA polymerase II transcription fac...   181   6e-55
ref|XP_022039573.1| probable RNA polymerase II transcription fac...   181   6e-55
ref|XP_022039574.1| probable RNA polymerase II transcription fac...   181   6e-55
ref|XP_023734834.1| probable RNA polymerase II transcription fac...   150   7e-46
ref|XP_023734836.1| probable RNA polymerase II transcription fac...   150   7e-46
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc...   151   1e-45
ref|XP_010644655.1| PREDICTED: probable RNA polymerase II transc...   151   1e-45
gb|AGQ44775.1| general transcription factor [Camellia sinensis]       151   2e-45
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]   149   4e-45
ref|XP_023733246.1| probable RNA polymerase II transcription fac...   147   6e-45
gb|PLY74266.1| hypothetical protein LSAT_1X66020 [Lactuca sativa]     147   6e-45
ref|XP_015881811.1| PREDICTED: probable RNA polymerase II transc...   151   2e-44
ref|XP_011653743.1| PREDICTED: probable RNA polymerase II transc...   147   5e-44
ref|XP_011653745.1| PREDICTED: probable RNA polymerase II transc...   147   5e-44
gb|KGN54487.1| hypothetical protein Csa_4G338420 [Cucumis sativus]    147   5e-44
ref|XP_023901094.1| general transcription and DNA repair factor ...   147   4e-43
ref|XP_023539702.1| probable RNA polymerase II transcription fac...   145   4e-43
ref|XP_022972269.1| probable RNA polymerase II transcription fac...   145   4e-43
ref|XP_022932684.1| probable RNA polymerase II transcription fac...   145   4e-43

>gb|KVH99257.1| BSD-like protein [Cynara cardunculus var. scolymus]
          Length = 580

 Score =  181 bits (458), Expect(2) = 4e-55
 Identities = 92/109 (84%), Positives = 99/109 (90%)
 Frame = +1

Query: 1   REPPVAPLCIKDPRDYFDSQQVNATNQEAGTKQMKSRLSTSEAYGSLRVFISEIRTVGLS 180
           R+PPVAPLCIKDPRDYFDSQQV    Q  GT+Q+KSRLSTSEAYGSLRVFISEIR +GL+
Sbjct: 366 RDPPVAPLCIKDPRDYFDSQQV----QLGGTRQVKSRLSTSEAYGSLRVFISEIRNIGLN 421

Query: 181 DPIVRPEVAVMVFNGLTQNISSSKYQLGKNPHESILDTLPHVTKEELLL 327
           DPIV+PEVA+ VFN LTQNISSSKYQLGKNPHESILDTLP VTKEELLL
Sbjct: 422 DPIVKPEVAIKVFNVLTQNISSSKYQLGKNPHESILDTLPSVTKEELLL 470



 Score = 62.8 bits (151), Expect(2) = 4e-55
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +3

Query: 369 HWTSIQELLKHFWSSYPITTTYLYTKVIS 455
           HWTSIQELLKHFWSSYPITT+YLY KV+S
Sbjct: 471 HWTSIQELLKHFWSSYPITTSYLYAKVVS 499


>ref|XP_022039572.1| probable RNA polymerase II transcription factor B subunit 1-1
           isoform X1 [Helianthus annuus]
 gb|OTG26581.1| hypothetical protein HannXRQ_Chr05g0160211 [Helianthus annuus]
          Length = 593

 Score =  181 bits (459), Expect(2) = 6e-55
 Identities = 91/109 (83%), Positives = 94/109 (86%)
 Frame = +1

Query: 1   REPPVAPLCIKDPRDYFDSQQVNATNQEAGTKQMKSRLSTSEAYGSLRVFISEIRTVGLS 180
           R+PPVAPLCIKDPRDYFDSQQVNA NQ +G +QMKSRLS SEAYGSLR  ISEI T G S
Sbjct: 392 RDPPVAPLCIKDPRDYFDSQQVNAMNQLSGLRQMKSRLSASEAYGSLRAHISEIGTAGFS 451

Query: 181 DPIVRPEVAVMVFNGLTQNISSSKYQLGKNPHESILDTLPHVTKEELLL 327
           DPIVRPEVA  VFN LTQNISSSKYQLGKNPHESI DTLP  TKEELLL
Sbjct: 452 DPIVRPEVAFQVFNSLTQNISSSKYQLGKNPHESIFDTLPSFTKEELLL 500



 Score = 62.0 bits (149), Expect(2) = 6e-55
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +3

Query: 369 HWTSIQELLKHFWSSYPITTTYLYTKV 449
           HWTSIQELLKHFWSSYPITT+YLYTKV
Sbjct: 501 HWTSIQELLKHFWSSYPITTSYLYTKV 527


>ref|XP_022039573.1| probable RNA polymerase II transcription factor B subunit 1-1
           isoform X2 [Helianthus annuus]
          Length = 592

 Score =  181 bits (459), Expect(2) = 6e-55
 Identities = 91/109 (83%), Positives = 94/109 (86%)
 Frame = +1

Query: 1   REPPVAPLCIKDPRDYFDSQQVNATNQEAGTKQMKSRLSTSEAYGSLRVFISEIRTVGLS 180
           R+PPVAPLCIKDPRDYFDSQQVNA NQ +G +QMKSRLS SEAYGSLR  ISEI T G S
Sbjct: 391 RDPPVAPLCIKDPRDYFDSQQVNAMNQLSGLRQMKSRLSASEAYGSLRAHISEIGTAGFS 450

Query: 181 DPIVRPEVAVMVFNGLTQNISSSKYQLGKNPHESILDTLPHVTKEELLL 327
           DPIVRPEVA  VFN LTQNISSSKYQLGKNPHESI DTLP  TKEELLL
Sbjct: 451 DPIVRPEVAFQVFNSLTQNISSSKYQLGKNPHESIFDTLPSFTKEELLL 499



 Score = 62.0 bits (149), Expect(2) = 6e-55
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +3

Query: 369 HWTSIQELLKHFWSSYPITTTYLYTKV 449
           HWTSIQELLKHFWSSYPITT+YLYTKV
Sbjct: 500 HWTSIQELLKHFWSSYPITTSYLYTKV 526


>ref|XP_022039574.1| probable RNA polymerase II transcription factor B subunit 1-1
           isoform X3 [Helianthus annuus]
          Length = 471

 Score =  181 bits (459), Expect(2) = 6e-55
 Identities = 91/109 (83%), Positives = 94/109 (86%)
 Frame = +1

Query: 1   REPPVAPLCIKDPRDYFDSQQVNATNQEAGTKQMKSRLSTSEAYGSLRVFISEIRTVGLS 180
           R+PPVAPLCIKDPRDYFDSQQVNA NQ +G +QMKSRLS SEAYGSLR  ISEI T G S
Sbjct: 270 RDPPVAPLCIKDPRDYFDSQQVNAMNQLSGLRQMKSRLSASEAYGSLRAHISEIGTAGFS 329

Query: 181 DPIVRPEVAVMVFNGLTQNISSSKYQLGKNPHESILDTLPHVTKEELLL 327
           DPIVRPEVA  VFN LTQNISSSKYQLGKNPHESI DTLP  TKEELLL
Sbjct: 330 DPIVRPEVAFQVFNSLTQNISSSKYQLGKNPHESIFDTLPSFTKEELLL 378



 Score = 62.0 bits (149), Expect(2) = 6e-55
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +3

Query: 369 HWTSIQELLKHFWSSYPITTTYLYTKV 449
           HWTSIQELLKHFWSSYPITT+YLYTKV
Sbjct: 379 HWTSIQELLKHFWSSYPITTSYLYTKV 405


>ref|XP_023734834.1| probable RNA polymerase II transcription factor B subunit 1-3
           isoform X1 [Lactuca sativa]
 ref|XP_023734835.1| probable RNA polymerase II transcription factor B subunit 1-3
           isoform X1 [Lactuca sativa]
 gb|PLY73018.1| hypothetical protein LSAT_9X33460 [Lactuca sativa]
          Length = 604

 Score =  150 bits (380), Expect(2) = 7e-46
 Identities = 81/116 (69%), Positives = 89/116 (76%), Gaps = 7/116 (6%)
 Frame = +1

Query: 1   REPPVAPLCIKDPRDYFDSQQV-----NATNQEAGTKQMKSRLSTSEAYGSLRVFISEIR 165
           R+PPVAPL IKDPRDYFDSQQ             G +Q KSR+ TSE Y SLR FISEIR
Sbjct: 399 RDPPVAPLSIKDPRDYFDSQQQVVGMGMGDELGGGGRQFKSRMKTSETYASLRGFISEIR 458

Query: 166 TVGLSDPIVRPEVAVMVFNGLTQNISSSKYQ--LGKNPHESILDTLPHVTKEELLL 327
           T+GL+DP+VRPEVAV V NGLTQ ISSSKYQ   GKNPH+SILDTLP VTK+ELLL
Sbjct: 459 TLGLTDPVVRPEVAVKVLNGLTQTISSSKYQRGFGKNPHDSILDTLPTVTKDELLL 514



 Score = 62.0 bits (149), Expect(2) = 7e-46
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +3

Query: 369 HWTSIQELLKHFWSSYPITTTYLYTKV 449
           HWTSIQELLKHFWSSYPITT+YLYTKV
Sbjct: 515 HWTSIQELLKHFWSSYPITTSYLYTKV 541


>ref|XP_023734836.1| probable RNA polymerase II transcription factor B subunit 1-1
           isoform X2 [Lactuca sativa]
          Length = 570

 Score =  150 bits (380), Expect(2) = 7e-46
 Identities = 81/116 (69%), Positives = 89/116 (76%), Gaps = 7/116 (6%)
 Frame = +1

Query: 1   REPPVAPLCIKDPRDYFDSQQV-----NATNQEAGTKQMKSRLSTSEAYGSLRVFISEIR 165
           R+PPVAPL IKDPRDYFDSQQ             G +Q KSR+ TSE Y SLR FISEIR
Sbjct: 365 RDPPVAPLSIKDPRDYFDSQQQVVGMGMGDELGGGGRQFKSRMKTSETYASLRGFISEIR 424

Query: 166 TVGLSDPIVRPEVAVMVFNGLTQNISSSKYQ--LGKNPHESILDTLPHVTKEELLL 327
           T+GL+DP+VRPEVAV V NGLTQ ISSSKYQ   GKNPH+SILDTLP VTK+ELLL
Sbjct: 425 TLGLTDPVVRPEVAVKVLNGLTQTISSSKYQRGFGKNPHDSILDTLPTVTKDELLL 480



 Score = 62.0 bits (149), Expect(2) = 7e-46
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +3

Query: 369 HWTSIQELLKHFWSSYPITTTYLYTKV 449
           HWTSIQELLKHFWSSYPITT+YLYTKV
Sbjct: 481 HWTSIQELLKHFWSSYPITTSYLYTKV 507


>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X1 [Vitis vinifera]
 emb|CBI39821.3| unnamed protein product, partial [Vitis vinifera]
          Length = 602

 Score =  151 bits (381), Expect(2) = 1e-45
 Identities = 77/112 (68%), Positives = 91/112 (81%), Gaps = 4/112 (3%)
 Frame = +1

Query: 1   REPPVAPLCIKDPRDYFDSQQVNAT----NQEAGTKQMKSRLSTSEAYGSLRVFISEIRT 168
           R+ P A LCIKDPRDYFDSQQ NA     +  AG+KQ+K  LST EAYGSLR FISEI++
Sbjct: 397 RDLPFAALCIKDPRDYFDSQQANALKTLGDTLAGSKQIKCSLSTQEAYGSLRGFISEIKS 456

Query: 169 VGLSDPIVRPEVAVMVFNGLTQNISSSKYQLGKNPHESILDTLPHVTKEELL 324
           VGLSDPIV+P++A+ V NGLTQNISS+K+ LGKNP ES+LD LP +TKEELL
Sbjct: 457 VGLSDPIVKPDIALKVLNGLTQNISSTKFHLGKNPQESVLDRLPIITKEELL 508



 Score = 60.8 bits (146), Expect(2) = 1e-45
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +3

Query: 369 HWTSIQELLKHFWSSYPITTTYLYTK 446
           HWTSIQELL+HFWSSYPITTTYLYTK
Sbjct: 510 HWTSIQELLRHFWSSYPITTTYLYTK 535


>ref|XP_010644655.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X2 [Vitis vinifera]
          Length = 576

 Score =  151 bits (381), Expect(2) = 1e-45
 Identities = 77/112 (68%), Positives = 91/112 (81%), Gaps = 4/112 (3%)
 Frame = +1

Query: 1   REPPVAPLCIKDPRDYFDSQQVNAT----NQEAGTKQMKSRLSTSEAYGSLRVFISEIRT 168
           R+ P A LCIKDPRDYFDSQQ NA     +  AG+KQ+K  LST EAYGSLR FISEI++
Sbjct: 397 RDLPFAALCIKDPRDYFDSQQANALKTLGDTLAGSKQIKCSLSTQEAYGSLRGFISEIKS 456

Query: 169 VGLSDPIVRPEVAVMVFNGLTQNISSSKYQLGKNPHESILDTLPHVTKEELL 324
           VGLSDPIV+P++A+ V NGLTQNISS+K+ LGKNP ES+LD LP +TKEELL
Sbjct: 457 VGLSDPIVKPDIALKVLNGLTQNISSTKFHLGKNPQESVLDRLPIITKEELL 508



 Score = 60.8 bits (146), Expect(2) = 1e-45
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +3

Query: 369 HWTSIQELLKHFWSSYPITTTYLYTK 446
           HWTSIQELL+HFWSSYPITTTYLYTK
Sbjct: 510 HWTSIQELLRHFWSSYPITTTYLYTK 535


>gb|AGQ44775.1| general transcription factor [Camellia sinensis]
          Length = 340

 Score =  151 bits (382), Expect(2) = 2e-45
 Identities = 77/112 (68%), Positives = 88/112 (78%), Gaps = 4/112 (3%)
 Frame = +1

Query: 1   REPPVAPLCIKDPRDYFDSQQVNATNQEAGT----KQMKSRLSTSEAYGSLRVFISEIRT 168
           R+PP+APL IKDPRDYFDS Q NA      T    +QMK  LSTSEAYGSLR  ISEI+ 
Sbjct: 135 RDPPLAPLFIKDPRDYFDSHQANALKTLGDTLVETRQMKCNLSTSEAYGSLRECISEIKI 194

Query: 169 VGLSDPIVRPEVAVMVFNGLTQNISSSKYQLGKNPHESILDTLPHVTKEELL 324
            GLSDPIV+PE+A  VFNGLTQNISS+KY LGKNP ES+LD LP++TK+ELL
Sbjct: 195 AGLSDPIVKPEIAFKVFNGLTQNISSTKYHLGKNPQESVLDRLPNITKDELL 246



 Score = 60.1 bits (144), Expect(2) = 2e-45
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = +3

Query: 369 HWTSIQELLKHFWSSYPITTTYLYTKV 449
           HWTSIQELLKHFWSSYPITT+YLY KV
Sbjct: 248 HWTSIQELLKHFWSSYPITTSYLYVKV 274


>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
          Length = 735

 Score =  149 bits (377), Expect(2) = 4e-45
 Identities = 76/112 (67%), Positives = 91/112 (81%), Gaps = 4/112 (3%)
 Frame = +1

Query: 1   REPPVAPLCIKDPRDYFDSQQVNAT----NQEAGTKQMKSRLSTSEAYGSLRVFISEIRT 168
           R+ P A LCIKDPRDYFDSQQ NA     +  AG+KQ+K  LS+ EAYGSLR FISEI++
Sbjct: 440 RDLPFAALCIKDPRDYFDSQQANALKTLGDTLAGSKQIKCSLSSQEAYGSLRGFISEIKS 499

Query: 169 VGLSDPIVRPEVAVMVFNGLTQNISSSKYQLGKNPHESILDTLPHVTKEELL 324
           VGLSDPIV+P++A+ V NGLTQNISS+K+ LGKNP ES+LD LP +TKEELL
Sbjct: 500 VGLSDPIVKPDIALKVLNGLTQNISSTKFHLGKNPQESVLDRLPIITKEELL 551



 Score = 60.8 bits (146), Expect(2) = 4e-45
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +3

Query: 369 HWTSIQELLKHFWSSYPITTTYLYTK 446
           HWTSIQELL+HFWSSYPITTTYLYTK
Sbjct: 553 HWTSIQELLRHFWSSYPITTTYLYTK 578


>ref|XP_023733246.1| probable RNA polymerase II transcription factor B subunit 1-3
           [Lactuca sativa]
 ref|XP_023733247.1| probable RNA polymerase II transcription factor B subunit 1-3
           [Lactuca sativa]
          Length = 606

 Score =  147 bits (372), Expect(2) = 6e-45
 Identities = 79/118 (66%), Positives = 90/118 (76%), Gaps = 9/118 (7%)
 Frame = +1

Query: 1   REPPVAPLCIKDPRDYFDSQQV-------NATNQEAGTKQMKSRLSTSEAYGSLRVFISE 159
           R+PPVAPL IKDPRDYFDSQQ               G ++ KSR++TSE Y SLR FISE
Sbjct: 399 RDPPVAPLSIKDPRDYFDSQQQVVGMGMGMGDELGGGGRKFKSRMNTSETYASLRGFISE 458

Query: 160 IRTVGLSDPIVRPEVAVMVFNGLTQNISSSKYQ--LGKNPHESILDTLPHVTKEELLL 327
           I+T+GL+DP+VRPEVAV V NGLTQ ISSSKYQ   GKNPH+SILDTLP VTK+ELLL
Sbjct: 459 IKTLGLTDPVVRPEVAVKVLNGLTQTISSSKYQRGFGKNPHDSILDTLPTVTKDELLL 516



 Score = 62.0 bits (149), Expect(2) = 6e-45
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +3

Query: 369 HWTSIQELLKHFWSSYPITTTYLYTKV 449
           HWTSIQELLKHFWSSYPITT+YLYTKV
Sbjct: 517 HWTSIQELLKHFWSSYPITTSYLYTKV 543


>gb|PLY74266.1| hypothetical protein LSAT_1X66020 [Lactuca sativa]
          Length = 602

 Score =  147 bits (372), Expect(2) = 6e-45
 Identities = 79/118 (66%), Positives = 90/118 (76%), Gaps = 9/118 (7%)
 Frame = +1

Query: 1   REPPVAPLCIKDPRDYFDSQQV-------NATNQEAGTKQMKSRLSTSEAYGSLRVFISE 159
           R+PPVAPL IKDPRDYFDSQQ               G ++ KSR++TSE Y SLR FISE
Sbjct: 395 RDPPVAPLSIKDPRDYFDSQQQVVGMGMGMGDELGGGGRKFKSRMNTSETYASLRGFISE 454

Query: 160 IRTVGLSDPIVRPEVAVMVFNGLTQNISSSKYQ--LGKNPHESILDTLPHVTKEELLL 327
           I+T+GL+DP+VRPEVAV V NGLTQ ISSSKYQ   GKNPH+SILDTLP VTK+ELLL
Sbjct: 455 IKTLGLTDPVVRPEVAVKVLNGLTQTISSSKYQRGFGKNPHDSILDTLPTVTKDELLL 512



 Score = 62.0 bits (149), Expect(2) = 6e-45
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +3

Query: 369 HWTSIQELLKHFWSSYPITTTYLYTKV 449
           HWTSIQELLKHFWSSYPITT+YLYTKV
Sbjct: 513 HWTSIQELLKHFWSSYPITTSYLYTKV 539


>ref|XP_015881811.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Ziziphus jujuba]
          Length = 607

 Score =  151 bits (382), Expect(2) = 2e-44
 Identities = 77/109 (70%), Positives = 87/109 (79%), Gaps = 4/109 (3%)
 Frame = +1

Query: 10  PVAPLCIKDPRDYFDSQQVNATNQ----EAGTKQMKSRLSTSEAYGSLRVFISEIRTVGL 177
           P APLCIKDPR+YFD+QQ NA        AGT+QMK  L+  E Y SLR  ISEI+T GL
Sbjct: 405 PFAPLCIKDPREYFDAQQANALRSLDDTRAGTEQMKCNLTNEEVYSSLRKSISEIKTRGL 464

Query: 178 SDPIVRPEVAVMVFNGLTQNISSSKYQLGKNPHESILDTLPHVTKEELL 324
           +DPIV+PEVA+MVFNGLTQNISS+KYQLGKNP ESILD LP+ TKEELL
Sbjct: 465 NDPIVKPEVALMVFNGLTQNISSNKYQLGKNPQESILDRLPNTTKEELL 513



 Score = 56.2 bits (134), Expect(2) = 2e-44
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = +3

Query: 369 HWTSIQELLKHFWSSYPITTTYLYTKV 449
           HW SIQELL+HFWSSYPITTTYL TKV
Sbjct: 515 HWMSIQELLQHFWSSYPITTTYLNTKV 541


>ref|XP_011653743.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X1 [Cucumis sativus]
 ref|XP_011653744.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X1 [Cucumis sativus]
          Length = 595

 Score =  147 bits (370), Expect(2) = 5e-44
 Identities = 74/109 (67%), Positives = 89/109 (81%), Gaps = 4/109 (3%)
 Frame = +1

Query: 10  PVAPLCIKDPRDYFDSQQVNAT----NQEAGTKQMKSRLSTSEAYGSLRVFISEIRTVGL 177
           P APLCIKDPRDYFD+QQ NA     +  AG +Q K  LST+EAYGSLR  ISEI++ G 
Sbjct: 393 PFAPLCIKDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLSTTEAYGSLRESISEIKSSGF 452

Query: 178 SDPIVRPEVAVMVFNGLTQNISSSKYQLGKNPHESILDTLPHVTKEELL 324
           + PI++PEVA+MV+NGLTQNISS+KYQLGKNP ESIL++LP+ TKEELL
Sbjct: 453 NHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELL 501



 Score = 59.7 bits (143), Expect(2) = 5e-44
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = +3

Query: 369 HWTSIQELLKHFWSSYPITTTYLYTKV 449
           HW SIQELLKHFWSSYPITT+YLYTKV
Sbjct: 503 HWISIQELLKHFWSSYPITTSYLYTKV 529


>ref|XP_011653745.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X2 [Cucumis sativus]
          Length = 509

 Score =  147 bits (370), Expect(2) = 5e-44
 Identities = 74/109 (67%), Positives = 89/109 (81%), Gaps = 4/109 (3%)
 Frame = +1

Query: 10  PVAPLCIKDPRDYFDSQQVNAT----NQEAGTKQMKSRLSTSEAYGSLRVFISEIRTVGL 177
           P APLCIKDPRDYFD+QQ NA     +  AG +Q K  LST+EAYGSLR  ISEI++ G 
Sbjct: 307 PFAPLCIKDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLSTTEAYGSLRESISEIKSSGF 366

Query: 178 SDPIVRPEVAVMVFNGLTQNISSSKYQLGKNPHESILDTLPHVTKEELL 324
           + PI++PEVA+MV+NGLTQNISS+KYQLGKNP ESIL++LP+ TKEELL
Sbjct: 367 NHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELL 415



 Score = 59.7 bits (143), Expect(2) = 5e-44
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = +3

Query: 369 HWTSIQELLKHFWSSYPITTTYLYTKV 449
           HW SIQELLKHFWSSYPITT+YLYTKV
Sbjct: 417 HWISIQELLKHFWSSYPITTSYLYTKV 443


>gb|KGN54487.1| hypothetical protein Csa_4G338420 [Cucumis sativus]
          Length = 388

 Score =  147 bits (370), Expect(2) = 5e-44
 Identities = 74/109 (67%), Positives = 89/109 (81%), Gaps = 4/109 (3%)
 Frame = +1

Query: 10  PVAPLCIKDPRDYFDSQQVNAT----NQEAGTKQMKSRLSTSEAYGSLRVFISEIRTVGL 177
           P APLCIKDPRDYFD+QQ NA     +  AG +Q K  LST+EAYGSLR  ISEI++ G 
Sbjct: 186 PFAPLCIKDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLSTTEAYGSLRESISEIKSSGF 245

Query: 178 SDPIVRPEVAVMVFNGLTQNISSSKYQLGKNPHESILDTLPHVTKEELL 324
           + PI++PEVA+MV+NGLTQNISS+KYQLGKNP ESIL++LP+ TKEELL
Sbjct: 246 NHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELL 294



 Score = 59.7 bits (143), Expect(2) = 5e-44
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = +3

Query: 369 HWTSIQELLKHFWSSYPITTTYLYTKV 449
           HW SIQELLKHFWSSYPITT+YLYTKV
Sbjct: 296 HWISIQELLKHFWSSYPITTSYLYTKV 322


>ref|XP_023901094.1| general transcription and DNA repair factor IIH subunit TFB1-1-like
           isoform X3 [Quercus suber]
 gb|POE49961.1| putative rna polymerase ii transcription factor b subunit 1-1
           [Quercus suber]
          Length = 609

 Score =  147 bits (370), Expect(2) = 4e-43
 Identities = 73/106 (68%), Positives = 89/106 (83%), Gaps = 1/106 (0%)
 Frame = +1

Query: 10  PVAPLCIKDPRDYFDSQQVNATNQ-EAGTKQMKSRLSTSEAYGSLRVFISEIRTVGLSDP 186
           P APLCIKDPRDYFDSQQ+  ++   AG++Q++  LS+ EAYGSLR  ISEI+ +GLSDP
Sbjct: 410 PFAPLCIKDPRDYFDSQQLKTSDDTRAGSEQLRCSLSSEEAYGSLRGSISEIKAMGLSDP 469

Query: 187 IVRPEVAVMVFNGLTQNISSSKYQLGKNPHESILDTLPHVTKEELL 324
           +VRPEVAVMV NGLTQNISS+K+QLGKN  E IL++LP+ TKEELL
Sbjct: 470 VVRPEVAVMVLNGLTQNISSTKFQLGKNAQEGILNSLPNTTKEELL 515



 Score = 56.6 bits (135), Expect(2) = 4e-43
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = +3

Query: 369 HWTSIQELLKHFWSSYPITTTYLYTKV 449
           HW SIQELL+HFWSSYPITT+YLY KV
Sbjct: 517 HWISIQELLRHFWSSYPITTSYLYAKV 543


>ref|XP_023539702.1| probable RNA polymerase II transcription factor B subunit 1-1
           isoform X1 [Cucurbita pepo subsp. pepo]
          Length = 595

 Score =  145 bits (365), Expect(2) = 4e-43
 Identities = 74/109 (67%), Positives = 89/109 (81%), Gaps = 4/109 (3%)
 Frame = +1

Query: 10  PVAPLCIKDPRDYFDSQQVNAT----NQEAGTKQMKSRLSTSEAYGSLRVFISEIRTVGL 177
           P APLCIKDPRDYFD+QQ NA     +  AG +Q K  LST+EAY SLR  ISEI++ GL
Sbjct: 393 PFAPLCIKDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLSTTEAYCSLRESISEIKSSGL 452

Query: 178 SDPIVRPEVAVMVFNGLTQNISSSKYQLGKNPHESILDTLPHVTKEELL 324
           + PI++PEVA+MV+NGLTQNISS+KYQLGKNP ESIL++LP+ TKEELL
Sbjct: 453 NHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELL 501



 Score = 58.5 bits (140), Expect(2) = 4e-43
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +3

Query: 369 HWTSIQELLKHFWSSYPITTTYLYTKV 449
           HW SIQELL+HFWSSYPITT+YLYTKV
Sbjct: 503 HWISIQELLRHFWSSYPITTSYLYTKV 529


>ref|XP_022972269.1| probable RNA polymerase II transcription factor B subunit 1-1
           [Cucurbita maxima]
          Length = 595

 Score =  145 bits (365), Expect(2) = 4e-43
 Identities = 74/109 (67%), Positives = 89/109 (81%), Gaps = 4/109 (3%)
 Frame = +1

Query: 10  PVAPLCIKDPRDYFDSQQVNAT----NQEAGTKQMKSRLSTSEAYGSLRVFISEIRTVGL 177
           P APLCIKDPRDYFD+QQ NA     +  AG +Q K  LST+EAY SLR  ISEI++ GL
Sbjct: 393 PFAPLCIKDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLSTTEAYCSLRESISEIKSSGL 452

Query: 178 SDPIVRPEVAVMVFNGLTQNISSSKYQLGKNPHESILDTLPHVTKEELL 324
           + PI++PEVA+MV+NGLTQNISS+KYQLGKNP ESIL++LP+ TKEELL
Sbjct: 453 NHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELL 501



 Score = 58.5 bits (140), Expect(2) = 4e-43
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +3

Query: 369 HWTSIQELLKHFWSSYPITTTYLYTKV 449
           HW SIQELL+HFWSSYPITT+YLYTKV
Sbjct: 503 HWISIQELLRHFWSSYPITTSYLYTKV 529


>ref|XP_022932684.1| probable RNA polymerase II transcription factor B subunit 1-1
           [Cucurbita moschata]
          Length = 595

 Score =  145 bits (365), Expect(2) = 4e-43
 Identities = 74/109 (67%), Positives = 89/109 (81%), Gaps = 4/109 (3%)
 Frame = +1

Query: 10  PVAPLCIKDPRDYFDSQQVNAT----NQEAGTKQMKSRLSTSEAYGSLRVFISEIRTVGL 177
           P APLCIKDPRDYFD+QQ NA     +  AG +Q K  LST+EAY SLR  ISEI++ GL
Sbjct: 393 PFAPLCIKDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLSTTEAYCSLRESISEIKSSGL 452

Query: 178 SDPIVRPEVAVMVFNGLTQNISSSKYQLGKNPHESILDTLPHVTKEELL 324
           + PI++PEVA+MV+NGLTQNISS+KYQLGKNP ESIL++LP+ TKEELL
Sbjct: 453 NHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELL 501



 Score = 58.5 bits (140), Expect(2) = 4e-43
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +3

Query: 369 HWTSIQELLKHFWSSYPITTTYLYTKV 449
           HW SIQELL+HFWSSYPITT+YLYTKV
Sbjct: 503 HWISIQELLRHFWSSYPITTSYLYTKV 529