BLASTX nr result

ID: Chrysanthemum21_contig00005151 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00005151
         (374 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH90404.1| hypothetical protein Ccrd_007577 [Cynara carduncu...    61   2e-08
ref|XP_023765815.1| uncharacterized protein LOC111914272 [Lactuc...    56   2e-06

>gb|KVH90404.1| hypothetical protein Ccrd_007577 [Cynara cardunculus var. scolymus]
          Length = 306

 Score = 60.8 bits (146), Expect = 2e-08
 Identities = 27/46 (58%), Positives = 38/46 (82%)
 Frame = +3

Query: 72  IASMVQKKQELQAQNLELKAKKQKISYTRNMEDMQLWNNPMKVNLD 209
           I +M   +Q+L AQNLELKAK+Q+I+Y++N+ED +LWNN M +NLD
Sbjct: 140 IRAMETLRQKLGAQNLELKAKRQEINYSKNIEDFRLWNNSMNMNLD 185


>ref|XP_023765815.1| uncharacterized protein LOC111914272 [Lactuca sativa]
 gb|PLY84006.1| hypothetical protein LSAT_8X30660 [Lactuca sativa]
          Length = 327

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 27/48 (56%), Positives = 37/48 (77%)
 Frame = +3

Query: 66  RDIASMVQKKQELQAQNLELKAKKQKISYTRNMEDMQLWNNPMKVNLD 209
           R I +M   ++EL AQNLELK K+Q+I+ TRNM+D+ LWNN M++N D
Sbjct: 151 RKIKAMENHREELIAQNLELKRKRQEIN-TRNMDDLHLWNNSMRMNRD 197


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