BLASTX nr result

ID: Chrysanthemum21_contig00005084 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00005084
         (438 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH12515.1| Zinc finger, HIT-type [Cynara cardunculus var. sc...    64   5e-09
ref|XP_021981499.1| uncharacterized protein LOC110877645 isoform...    64   7e-09
ref|XP_021981498.1| uncharacterized protein LOC110877645 isoform...    64   7e-09
ref|XP_023736058.1| putative DNA helicase INO80 [Lactuca sativa]...    57   9e-07

>gb|KVH12515.1| Zinc finger, HIT-type [Cynara cardunculus var. scolymus]
          Length = 520

 Score = 63.9 bits (154), Expect = 5e-09
 Identities = 31/37 (83%), Positives = 35/37 (94%)
 Frame = -2

Query: 134 AELRYLAKMRMKSFRGDDEDEGGSRKQRKISSVLKMD 24
           AELRYLAKMR+KS + DDEDEGGS+KQRKISSVLKM+
Sbjct: 287 AELRYLAKMRLKSAKVDDEDEGGSKKQRKISSVLKME 323


>ref|XP_021981499.1| uncharacterized protein LOC110877645 isoform X2 [Helianthus annuus]
          Length = 476

 Score = 63.5 bits (153), Expect = 7e-09
 Identities = 30/44 (68%), Positives = 38/44 (86%)
 Frame = -2

Query: 134 AELRYLAKMRMKSFRGDDEDEGGSRKQRKISSVLKMDRRKTPRT 3
           AELRYLAKM+ +S + +D DEGGSRKQRKISSV+KM+ +K P+T
Sbjct: 219 AELRYLAKMKTRSAKIEDVDEGGSRKQRKISSVMKMESKKKPKT 262


>ref|XP_021981498.1| uncharacterized protein LOC110877645 isoform X1 [Helianthus annuus]
 gb|OTG14155.1| putative INO80 complex subunit B-like conserved region [Helianthus
           annuus]
          Length = 486

 Score = 63.5 bits (153), Expect = 7e-09
 Identities = 30/44 (68%), Positives = 38/44 (86%)
 Frame = -2

Query: 134 AELRYLAKMRMKSFRGDDEDEGGSRKQRKISSVLKMDRRKTPRT 3
           AELRYLAKM+ +S + +D DEGGSRKQRKISSV+KM+ +K P+T
Sbjct: 229 AELRYLAKMKTRSAKIEDVDEGGSRKQRKISSVMKMESKKKPKT 272


>ref|XP_023736058.1| putative DNA helicase INO80 [Lactuca sativa]
 gb|PLY72073.1| hypothetical protein LSAT_9X121880 [Lactuca sativa]
          Length = 497

 Score = 57.4 bits (137), Expect = 9e-07
 Identities = 27/37 (72%), Positives = 34/37 (91%)
 Frame = -2

Query: 134 AELRYLAKMRMKSFRGDDEDEGGSRKQRKISSVLKMD 24
           AELRYLAKM++KS + ++EDEGGS+K RKISSVLKM+
Sbjct: 239 AELRYLAKMKLKSTKVNEEDEGGSKKHRKISSVLKME 275


Top