BLASTX nr result
ID: Chrysanthemum21_contig00004755
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum21_contig00004755
(803 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_022001683.1| small nuclear ribonucleoprotein SmD3b-like [... 202 9e-63
gb|KVI05173.1| Like-Sm (LSM) domain-containing protein [Cynara c... 202 9e-63
ref|XP_023730717.1| small nuclear ribonucleoprotein SmD3b-like [... 202 1e-62
ref|XP_021997673.1| small nuclear ribonucleoprotein SmD3b-like [... 201 3e-62
gb|OTG04903.1| putative LSM domain, Like-Sm (LSM) domain contain... 201 1e-61
emb|CDP08394.1| unnamed protein product [Coffea canephora] 199 1e-61
ref|XP_017238503.1| PREDICTED: small nuclear ribonucleoprotein S... 199 2e-61
ref|XP_002282385.1| PREDICTED: small nuclear ribonucleoprotein S... 199 2e-61
gb|OVA00601.1| Ribonucleoprotein LSM domain [Macleaya cordata] 199 2e-61
gb|PIN16684.1| Small nuclear ribonucleoprotein Sm D3 [Handroanth... 198 3e-61
gb|KZV54210.1| hypothetical protein F511_36778 [Dorcoceras hygro... 198 3e-61
ref|XP_020700741.1| small nuclear ribonucleoprotein SmD3b [Dendr... 197 4e-61
ref|XP_022847596.1| small nuclear ribonucleoprotein SmD3b-like [... 198 5e-61
ref|XP_020683560.1| small nuclear ribonucleoprotein SmD3b-like [... 197 7e-61
ref|NP_001150683.1| uncharacterized protein LOC100284316 [Zea ma... 197 7e-61
ref|XP_012834349.1| PREDICTED: small nuclear ribonucleoprotein S... 197 7e-61
gb|ACN32165.1| unknown [Zea mays] 197 8e-61
gb|KVI07699.1| Like-Sm (LSM) domain-containing protein [Cynara c... 197 9e-61
gb|EMS50224.1| hypothetical protein TRIUR3_26641 [Triticum urartu] 197 9e-61
gb|AQL08155.1| Small nuclear ribonucleoprotein SmD3b [Zea mays] 197 9e-61
>ref|XP_022001683.1| small nuclear ribonucleoprotein SmD3b-like [Helianthus annuus]
gb|OTG02140.1| putative small nuclear ribonucleoprotein Sm D3 [Helianthus annuus]
Length = 127
Score = 202 bits (514), Expect = 9e-63
Identities = 100/101 (99%), Positives = 100/101 (99%)
Frame = -1
Query: 665 MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKVTQL 486
MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKV QL
Sbjct: 1 MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKVAQL 60
Query: 485 EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSALGV 363
EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSALGV
Sbjct: 61 EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSALGV 101
>gb|KVI05173.1| Like-Sm (LSM) domain-containing protein [Cynara cardunculus var.
scolymus]
Length = 127
Score = 202 bits (514), Expect = 9e-63
Identities = 100/101 (99%), Positives = 100/101 (99%)
Frame = -1
Query: 665 MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKVTQL 486
MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKV QL
Sbjct: 1 MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKVAQL 60
Query: 485 EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSALGV 363
EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSALGV
Sbjct: 61 EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSALGV 101
>ref|XP_023730717.1| small nuclear ribonucleoprotein SmD3b-like [Lactuca sativa]
gb|PLY76283.1| hypothetical protein LSAT_8X26300 [Lactuca sativa]
Length = 129
Score = 202 bits (514), Expect = 1e-62
Identities = 100/101 (99%), Positives = 100/101 (99%)
Frame = -1
Query: 665 MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKVTQL 486
MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKV QL
Sbjct: 1 MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKVAQL 60
Query: 485 EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSALGV 363
EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSALGV
Sbjct: 61 EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSALGV 101
>ref|XP_021997673.1| small nuclear ribonucleoprotein SmD3b-like [Helianthus annuus]
Length = 127
Score = 201 bits (511), Expect = 3e-62
Identities = 99/101 (98%), Positives = 100/101 (99%)
Frame = -1
Query: 665 MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKVTQL 486
MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKV QL
Sbjct: 1 MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKVAQL 60
Query: 485 EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSALGV 363
EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGS+LGV
Sbjct: 61 EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSSLGV 101
>gb|OTG04903.1| putative LSM domain, Like-Sm (LSM) domain containing protein,
LSm4/SmD1/SmD3 [Helianthus annuus]
Length = 169
Score = 201 bits (511), Expect = 1e-61
Identities = 99/101 (98%), Positives = 100/101 (99%)
Frame = -1
Query: 665 MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKVTQL 486
MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKV QL
Sbjct: 43 MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKVAQL 102
Query: 485 EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSALGV 363
EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGS+LGV
Sbjct: 103 EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSSLGV 143
>emb|CDP08394.1| unnamed protein product [Coffea canephora]
Length = 132
Score = 199 bits (507), Expect = 1e-61
Identities = 97/101 (96%), Positives = 100/101 (99%)
Frame = -1
Query: 665 MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKVTQL 486
MSRSLGIPVKLLHEA GHIVTVELKSGE+YRGSMIECEDNWNCQLENITFTAKDGKV+QL
Sbjct: 1 MSRSLGIPVKLLHEATGHIVTVELKSGELYRGSMIECEDNWNCQLENITFTAKDGKVSQL 60
Query: 485 EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSALGV 363
EHVFIRGSKVRFM+IPDMLKNAPMFKRLEARIKGKGSALGV
Sbjct: 61 EHVFIRGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSALGV 101
>ref|XP_017238503.1| PREDICTED: small nuclear ribonucleoprotein SmD3b [Daucus carota
subsp. sativus]
gb|KZN00779.1| hypothetical protein DCAR_009533 [Daucus carota subsp. sativus]
Length = 132
Score = 199 bits (506), Expect = 2e-61
Identities = 96/101 (95%), Positives = 101/101 (100%)
Frame = -1
Query: 665 MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKVTQL 486
MSRSLGIPVKLLHEAAGHIVTVELKSGE+YRGSMIECEDNWNCQLENITFTAKDGKV+QL
Sbjct: 1 MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLENITFTAKDGKVSQL 60
Query: 485 EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSALGV 363
EHVFIRGSKVRFM+IPDMLKNAPMFKRLEARIKGKGS++GV
Sbjct: 61 EHVFIRGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSIGV 101
>ref|XP_002282385.1| PREDICTED: small nuclear ribonucleoprotein SmD3b [Vitis vinifera]
emb|CBI37756.3| unnamed protein product, partial [Vitis vinifera]
Length = 132
Score = 199 bits (506), Expect = 2e-61
Identities = 95/101 (94%), Positives = 101/101 (100%)
Frame = -1
Query: 665 MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKVTQL 486
MSRSLGIPVKLLHEAAGH+VTVELKSGE+YRGSMIECEDNWNCQLENITFTAKDGKV+QL
Sbjct: 1 MSRSLGIPVKLLHEAAGHVVTVELKSGELYRGSMIECEDNWNCQLENITFTAKDGKVSQL 60
Query: 485 EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSALGV 363
EHVFIRGSKVRFM+IPDMLKNAPMFKRL+AR+KGKGSALGV
Sbjct: 61 EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARVKGKGSALGV 101
>gb|OVA00601.1| Ribonucleoprotein LSM domain [Macleaya cordata]
Length = 132
Score = 199 bits (505), Expect = 2e-61
Identities = 96/101 (95%), Positives = 101/101 (100%)
Frame = -1
Query: 665 MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKVTQL 486
MSRSLGIPVKLLHEAAGHIVTVELKSGE+YRGSMIECEDNWNCQLENITFTAKDGKV+QL
Sbjct: 1 MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLENITFTAKDGKVSQL 60
Query: 485 EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSALGV 363
EHVFIRGSKVRFM+IPDMLKNAPMFKRL+ARIKGKGS+LGV
Sbjct: 61 EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGSSLGV 101
>gb|PIN16684.1| Small nuclear ribonucleoprotein Sm D3 [Handroanthus impetiginosus]
Length = 132
Score = 198 bits (504), Expect = 3e-61
Identities = 95/101 (94%), Positives = 101/101 (100%)
Frame = -1
Query: 665 MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKVTQL 486
MSRSLGIPVKLLHEA+GHIVTVELKSGE+YRGSM+ECEDNWNCQLENIT+TAKDGKV+QL
Sbjct: 1 MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMVECEDNWNCQLENITYTAKDGKVSQL 60
Query: 485 EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSALGV 363
EHVFIRGSKVRFM+IPDMLKNAPMFKRLEARIKGKGSALGV
Sbjct: 61 EHVFIRGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSALGV 101
>gb|KZV54210.1| hypothetical protein F511_36778 [Dorcoceras hygrometricum]
Length = 132
Score = 198 bits (504), Expect = 3e-61
Identities = 95/101 (94%), Positives = 101/101 (100%)
Frame = -1
Query: 665 MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKVTQL 486
MSRSLGIPVKLLHEA+GHIVTVELKSGE+YRGSM+ECEDNWNCQLENIT+TAKDGKV+QL
Sbjct: 1 MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMVECEDNWNCQLENITYTAKDGKVSQL 60
Query: 485 EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSALGV 363
EHVFIRGSKVRFM+IPDMLKNAPMFKRLEARIKGKGSALGV
Sbjct: 61 EHVFIRGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSALGV 101
>ref|XP_020700741.1| small nuclear ribonucleoprotein SmD3b [Dendrobium catenatum]
Length = 116
Score = 197 bits (502), Expect = 4e-61
Identities = 95/101 (94%), Positives = 101/101 (100%)
Frame = -1
Query: 665 MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKVTQL 486
MSRSLGIPVKLLHEAAGHIVTVELKSGE+YRGSMIECEDNWNCQLENIT+TAKDGKV+QL
Sbjct: 1 MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQL 60
Query: 485 EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSALGV 363
EHVFIRGSKVRFM+IPDMLKNAPMFKRL+ARI+GKGSALGV
Sbjct: 61 EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIRGKGSALGV 101
>ref|XP_022847596.1| small nuclear ribonucleoprotein SmD3b-like [Olea europaea var.
sylvestris]
Length = 132
Score = 198 bits (503), Expect = 5e-61
Identities = 94/101 (93%), Positives = 101/101 (100%)
Frame = -1
Query: 665 MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKVTQL 486
MSRSLGIPVKLLHEA+GH+VTVELKSGE+YRGSM+ECEDNWNCQLENIT+TAKDGKV+QL
Sbjct: 1 MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMVECEDNWNCQLENITYTAKDGKVSQL 60
Query: 485 EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSALGV 363
EHVFIRGSKVRFM+IPDMLKNAPMFKRLEARIKGKGSALGV
Sbjct: 61 EHVFIRGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSALGV 101
>ref|XP_020683560.1| small nuclear ribonucleoprotein SmD3b-like [Dendrobium catenatum]
Length = 131
Score = 197 bits (502), Expect = 7e-61
Identities = 95/101 (94%), Positives = 101/101 (100%)
Frame = -1
Query: 665 MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKVTQL 486
MSRSLGIPVKLLHEAAGHIVTVELKSGE+YRGSMIECEDNWNCQLENIT+TAKDGKV+QL
Sbjct: 1 MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQL 60
Query: 485 EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSALGV 363
EHVFIRGSKVRFM+IPDMLKNAPMFKRL+ARI+GKGSALGV
Sbjct: 61 EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIRGKGSALGV 101
>ref|NP_001150683.1| uncharacterized protein LOC100284316 [Zea mays]
gb|ACF82548.1| unknown [Zea mays]
gb|ACG31630.1| small nuclear ribonucleoprotein Sm D3 [Zea mays]
gb|ACG39989.1| small nuclear ribonucleoprotein Sm D3 [Zea mays]
gb|AQL08157.1| Small nuclear ribonucleoprotein SmD3b [Zea mays]
Length = 132
Score = 197 bits (502), Expect = 7e-61
Identities = 94/101 (93%), Positives = 101/101 (100%)
Frame = -1
Query: 665 MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKVTQL 486
MSRSLGIPVKLLHEAAGH+VTVELK+GEVYRGSM+ECEDNWNCQLENITFTAKDGKV+QL
Sbjct: 1 MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLENITFTAKDGKVSQL 60
Query: 485 EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSALGV 363
EHVFIRGS+VRFMIIPDMLKNAPMFKRLEARI+GKGSA+GV
Sbjct: 61 EHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSAIGV 101
>ref|XP_012834349.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Erythranthe
guttata]
gb|EYU39880.1| hypothetical protein MIMGU_mgv1a016145mg [Erythranthe guttata]
Length = 133
Score = 197 bits (502), Expect = 7e-61
Identities = 95/101 (94%), Positives = 101/101 (100%)
Frame = -1
Query: 665 MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKVTQL 486
MSRSLGIPVKLLHEA+GHIVTVELKSGEVYRGSMIECEDNWNCQLENIT+TAKDGK++QL
Sbjct: 1 MSRSLGIPVKLLHEASGHIVTVELKSGEVYRGSMIECEDNWNCQLENITYTAKDGKLSQL 60
Query: 485 EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSALGV 363
EHVFIRGSKVRFM+IPDMLKNAPMFKRLEARIKGKGS+LGV
Sbjct: 61 EHVFIRGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSLGV 101
>gb|ACN32165.1| unknown [Zea mays]
Length = 125
Score = 197 bits (501), Expect = 8e-61
Identities = 94/101 (93%), Positives = 101/101 (100%)
Frame = -1
Query: 665 MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKVTQL 486
MSRSLGIPVKLLHEAAGH+VTVELK+GEVYRGSM+ECEDNWNCQLENITFTAKDGKV+QL
Sbjct: 1 MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLENITFTAKDGKVSQL 60
Query: 485 EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSALGV 363
EHVFIRGS+VRFMIIPDMLKNAPMFKRLEARI+GKGSA+GV
Sbjct: 61 EHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSAVGV 101
>gb|KVI07699.1| Like-Sm (LSM) domain-containing protein [Cynara cardunculus var.
scolymus]
Length = 128
Score = 197 bits (501), Expect = 9e-61
Identities = 95/101 (94%), Positives = 100/101 (99%)
Frame = -1
Query: 665 MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKVTQL 486
MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGS++ECEDNWNCQ+EN+TFTAKDGKV+QL
Sbjct: 1 MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSLVECEDNWNCQVENVTFTAKDGKVSQL 60
Query: 485 EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSALGV 363
EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGK SALGV
Sbjct: 61 EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKSSALGV 101
>gb|EMS50224.1| hypothetical protein TRIUR3_26641 [Triticum urartu]
Length = 130
Score = 197 bits (501), Expect = 9e-61
Identities = 94/101 (93%), Positives = 101/101 (100%)
Frame = -1
Query: 665 MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKVTQL 486
MSRSLGIPVKLLHEAAGH+VTVELK+GEVYRGSMIECEDNWNCQ+ENITFTAKDGKV+QL
Sbjct: 1 MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGSMIECEDNWNCQIENITFTAKDGKVSQL 60
Query: 485 EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSALGV 363
EHVFIRGS+VRFMIIPDMLKNAPMFKRLEARI+GKGSA+GV
Sbjct: 61 EHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSAIGV 101
>gb|AQL08155.1| Small nuclear ribonucleoprotein SmD3b [Zea mays]
Length = 141
Score = 197 bits (502), Expect = 9e-61
Identities = 94/101 (93%), Positives = 101/101 (100%)
Frame = -1
Query: 665 MSRSLGIPVKLLHEAAGHIVTVELKSGEVYRGSMIECEDNWNCQLENITFTAKDGKVTQL 486
MSRSLGIPVKLLHEAAGH+VTVELK+GEVYRGSM+ECEDNWNCQLENITFTAKDGKV+QL
Sbjct: 1 MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGSMVECEDNWNCQLENITFTAKDGKVSQL 60
Query: 485 EHVFIRGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSALGV 363
EHVFIRGS+VRFMIIPDMLKNAPMFKRLEARI+GKGSA+GV
Sbjct: 61 EHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSAIGV 101