BLASTX nr result

ID: Chrysanthemum21_contig00004714 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00004714
         (801 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTG10166.1| putative chloroplast protein import component Toc...    85   7e-15
ref|XP_021987645.1| translocase of chloroplast 159, chloroplasti...    85   7e-15
ref|XP_023771882.1| translocase of chloroplast 159, chloroplasti...    84   2e-14
gb|KVH94474.1| AIG1-like protein [Cynara cardunculus var. scolymus]    81   1e-13

>gb|OTG10166.1| putative chloroplast protein import component Toc86/159 [Helianthus
           annuus]
          Length = 1219

 Score = 85.1 bits (209), Expect = 7e-15
 Identities = 65/146 (44%), Positives = 81/146 (55%), Gaps = 11/146 (7%)
 Frame = -3

Query: 796 VVVDTDDENEGFASGQDEPFDTTLDDNTNSFPVAXXXXXXXXXXXETFSEALDVVVDDVE 617
           VVVDTDDE EGFASG++E F+T      N   V            E F E  + VV   +
Sbjct: 55  VVVDTDDETEGFASGEEEAFETA-----NENLVVGTETLANGEEGEMFLEPSEFVVAKAD 109

Query: 616 NQPKNDKLG--EKILDKVESKNSEDKVVENDKVGSENLDKEDE---------VVVENGVK 470
           +  +NDK+G  EK  +   S+N E +VV+ DKV  +  D  DE         VVV NGVK
Sbjct: 110 DD-ENDKVGFVEKKSEPNSSEN-EIEVVKGDKVSEKEDDLVDETESEGVTSEVVVANGVK 167

Query: 469 VTNEGDSVVEDIKVDVPTADPGVAVV 392
            T EGDS+V++IKVD P   PGVAVV
Sbjct: 168 ATVEGDSIVDEIKVDAPA--PGVAVV 191


>ref|XP_021987645.1| translocase of chloroplast 159, chloroplastic-like [Helianthus
           annuus]
          Length = 1294

 Score = 85.1 bits (209), Expect = 7e-15
 Identities = 65/146 (44%), Positives = 81/146 (55%), Gaps = 11/146 (7%)
 Frame = -3

Query: 796 VVVDTDDENEGFASGQDEPFDTTLDDNTNSFPVAXXXXXXXXXXXETFSEALDVVVDDVE 617
           VVVDTDDE EGFASG++E F+T      N   V            E F E  + VV   +
Sbjct: 55  VVVDTDDETEGFASGEEEAFETA-----NENLVVGTETLANGEEGEMFLEPSEFVVAKAD 109

Query: 616 NQPKNDKLG--EKILDKVESKNSEDKVVENDKVGSENLDKEDE---------VVVENGVK 470
           +  +NDK+G  EK  +   S+N E +VV+ DKV  +  D  DE         VVV NGVK
Sbjct: 110 DD-ENDKVGFVEKKSEPNSSEN-EIEVVKGDKVSEKEDDLVDETESEGVTSEVVVANGVK 167

Query: 469 VTNEGDSVVEDIKVDVPTADPGVAVV 392
            T EGDS+V++IKVD P   PGVAVV
Sbjct: 168 ATVEGDSIVDEIKVDAPA--PGVAVV 191


>ref|XP_023771882.1| translocase of chloroplast 159, chloroplastic [Lactuca sativa]
          Length = 1336

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 70/175 (40%), Positives = 86/175 (49%), Gaps = 44/175 (25%)
 Frame = -3

Query: 784 TDDENEGFASGQDEPFDTTLDDNTNSFPVAXXXXXXXXXXXETFSEALDV---------- 635
           +DDENEGFASG++E F+T LD+N+     A           E FSEA +V          
Sbjct: 47  SDDENEGFASGEEEAFETNLDENSK----AILNVDEGGDNGEKFSEAFEVLLPKVDLATV 102

Query: 634 ---VVDDVE--NQPKNDKLGEKILDKVESKNSEDKV-------VENDKV-------GSEN 512
              VVDD E  N    DK  ++ L+  E+ NS + V       +E DKV         E 
Sbjct: 103 SDEVVDDAEKGNLGLVDKRADEKLESDENLNSSEVVKEEVVEGIEGDKVIESKGDVVDET 162

Query: 511 LDK---------------EDEVVVENGVKVTNEGDSVVEDIKVDVPTADPGVAVV 392
           + K               E EVVV NGVK+T EGDSVVE+IKVD P   PGVAVV
Sbjct: 163 VSKVVNRDEVKPDSPKEGEKEVVVANGVKLTTEGDSVVEEIKVDAPV--PGVAVV 215


>gb|KVH94474.1| AIG1-like protein [Cynara cardunculus var. scolymus]
          Length = 1378

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 59/159 (37%), Positives = 81/159 (50%), Gaps = 26/159 (16%)
 Frame = -3

Query: 790 VDTDDENEGFASGQDEPFDTTLDDNTNSFPVAXXXXXXXXXXXETFSEALDVVVDDVENQ 611
           V++DDENEGFASG++E F+T LD+N  +               ++F E  +  +  VE++
Sbjct: 45  VNSDDENEGFASGEEEAFETNLDENLETL--------VNVDEGDSFLETSEFPISKVESE 96

Query: 610 PKNDKL-----GEKILDKVESKNSEDKVV-------ENDKVGSENLDKEDE--------- 494
             +D++      EK    VE  NS++ V        E DKVG    D  DE         
Sbjct: 97  TVSDEVVVDDDAEKGNLVVEGLNSDELVKQEVLEGSEGDKVGEIKEDVVDETVSKVVSSD 156

Query: 493 -----VVVENGVKVTNEGDSVVEDIKVDVPTADPGVAVV 392
                VV ENGVKVT EGDS+VE +++D P   PGV VV
Sbjct: 157 EVKSEVVAENGVKVTTEGDSIVEKVEIDTPA--PGVVVV 193


Top