BLASTX nr result

ID: Chrysanthemum21_contig00004626 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00004626
         (1214 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY90785.1| hypothetical protein LSAT_1X47781 [Lactuca sativa]     110   2e-23

>gb|PLY90785.1| hypothetical protein LSAT_1X47781 [Lactuca sativa]
          Length = 336

 Score =  110 bits (274), Expect = 2e-23
 Identities = 81/178 (45%), Positives = 105/178 (58%), Gaps = 3/178 (1%)
 Frame = -1

Query: 1193 RIV*EIQW-AVVVDIHSKVTKPGPKQTGHPLVDPKCSNRVTTMCNLVPTLVNPLSTPNNH 1017
            RIV E QW AV  DIHSK TK  P+QT  P   PKC+N+    CN V TLV+PL+TPN +
Sbjct: 8    RIVRETQWVAVEEDIHSKATKLDPRQTPGPHPHPKCNNKAMVTCNQVHTLVSPLNTPNPN 67

Query: 1016 MVAILASKPQVDMLLVGTSQQLELLQHSKPLREVVLMIITISNKLHKPNRLVA--LRQMH 843
              A L    Q DM   G+S    + +    L  +V+MI T SNKL K N L A   +Q  
Sbjct: 68   TAATLV---QPDMPPAGSS---PVRKPHWELLLLVVMITTTSNKLPKANHLAAPWRQQTG 121

Query: 842  LLMGTVSKVKLMVKMGMEDMEHLNLVMVDMINKVMLILILQVDIIMLLAKQLMVKLAH 669
            L+ GTV++VK+ VKMGM    +L ++  D INK M  +I Q+DI+    K +MVK+ H
Sbjct: 122  LVTGTVNRVKVTVKMGMVGTHNL-VMRKDTINKGM--VIQQLDIM----KHMMVKMVH 172


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