BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00004560
         (368 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021982106.1| putative pentatricopeptide repeat-containing...    55   3e-06

>ref|XP_021982106.1| putative pentatricopeptide repeat-containing protein At1g12700,
           mitochondrial [Helianthus annuus]
 gb|OTG14747.1| putative rna processing factor 2 [Helianthus annuus]
          Length = 599

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 34/84 (40%), Positives = 47/84 (55%)
 Frame = +3

Query: 54  LNRTKSFVDAFIRYKYKGNFTITRSFLKSPXXXXXXXXXAGSVMVQDDTPTKLNDALNLF 233
           +NRT S + AFI  K++GN     S   SP          G+     D  T LNDALNLF
Sbjct: 2   MNRTNSVLHAFI--KFRGN-----SITNSPFLSFQLGLQYGTHSPVIDKITNLNDALNLF 54

Query: 234 NKMTQQRPLPWADEFTKILKVIRK 305
           ++M+Q+RPLP   +FT++L  + K
Sbjct: 55  DEMSQRRPLPSVVKFTQLLNAVTK 78