BLASTX nr result

ID: Chrysanthemum21_contig00004299 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00004299
         (1056 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI09720.1| Double-stranded RNA-binding [Cynara cardunculus v...    72   3e-10
ref|XP_023734648.1| double-stranded RNA-binding protein 2-like [...    72   4e-10
ref|XP_022028304.1| uncharacterized protein LOC110929452 [Helian...    60   1e-06
ref|XP_022012933.1| uncharacterized protein LOC110912501 [Helian...    59   2e-06
ref|XP_022016119.1| double-stranded RNA-binding protein 2-like [...    60   3e-06
ref|XP_009347131.1| PREDICTED: uncharacterized protein LOC103938...    56   3e-06
gb|KZM96513.1| hypothetical protein DCAR_019755 [Daucus carota s...    59   3e-06
ref|XP_017254097.1| PREDICTED: protein usf [Daucus carota subsp....    59   5e-06

>gb|KVI09720.1| Double-stranded RNA-binding [Cynara cardunculus var. scolymus]
          Length = 424

 Score = 72.4 bits (176), Expect = 3e-10
 Identities = 40/60 (66%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
 Frame = -2

Query: 959 PSPCYSKPHNAQSPTSTT*KILPLICPKTTPR-RPHLTTLFDNDETCNXXXXXKTTEPQK 783
           P+P   KPHNAQS  STT KILPLICPKTTPR RPHLTTL DNDE  N        E QK
Sbjct: 203 PNP---KPHNAQSTPSTTSKILPLICPKTTPRSRPHLTTLLDNDEAHNKTPQNNRNEIQK 259


>ref|XP_023734648.1| double-stranded RNA-binding protein 2-like [Lactuca sativa]
 gb|PLY73135.1| hypothetical protein LSAT_2X112300 [Lactuca sativa]
          Length = 409

 Score = 71.6 bits (174), Expect = 4e-10
 Identities = 45/86 (52%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
 Frame = -2

Query: 959 PSPCYSKPHNAQSPTSTT*KILPLICPKTTPR-RPHLTTLFDNDETCNXXXXXKTTEPQK 783
           PSP   KP+ +QSP STT KILPLICPKTTPR RPHLTTL DNDE  N          +K
Sbjct: 201 PSP-NPKPNTSQSPPSTTSKILPLICPKTTPRSRPHLTTLLDNDEASNKTPPQNNNRNEK 259

Query: 782 MR-QTHIFPHFTGGARTRP*DHARAL 708
              + H FP   G A   P  H R +
Sbjct: 260 QSPRPHKFP-AVGAAPYIPVRHFRGI 284


>ref|XP_022028304.1| uncharacterized protein LOC110929452 [Helianthus annuus]
 gb|OTG31233.1| putative alpha/beta-Hydrolases superfamily protein [Helianthus
           annuus]
          Length = 270

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 26/33 (78%), Positives = 30/33 (90%)
 Frame = -2

Query: 635 ERRKRLGMTDENEGAADLAWSRFQSWMSRYLSA 537
           ERRK +GM D+NE AA+LAWSRFQSWM+RYLSA
Sbjct: 238 ERRKGMGMNDDNEAAAELAWSRFQSWMNRYLSA 270


>ref|XP_022012933.1| uncharacterized protein LOC110912501 [Helianthus annuus]
 ref|XP_022012934.1| uncharacterized protein LOC110912501 [Helianthus annuus]
 ref|XP_022012935.1| uncharacterized protein LOC110912501 [Helianthus annuus]
 gb|OTF96095.1| putative carboxymethylenebutenolidase [Helianthus annuus]
          Length = 238

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = -2

Query: 632 RRKRLGMTDENEGAADLAWSRFQSWMSRYLSA 537
           RRK +GM D+NE AADLAWSRFQSWM+RYLSA
Sbjct: 207 RRKGMGMIDDNEAAADLAWSRFQSWMNRYLSA 238


>ref|XP_022016119.1| double-stranded RNA-binding protein 2-like [Helianthus annuus]
 ref|XP_022016120.1| double-stranded RNA-binding protein 2-like [Helianthus annuus]
 gb|OTF93440.1| putative dsRNA-binding protein 5 [Helianthus annuus]
          Length = 416

 Score = 60.1 bits (144), Expect = 3e-06
 Identities = 43/92 (46%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
 Frame = -2

Query: 959 PSPCYSKPHNAQSPTSTT*KILPLICPKTTPR-RPHLTTLFDNDETCN--------XXXX 807
           PSP   KPH AQS  STT KILPLICPKTTPR R H+ T  DN+ T N            
Sbjct: 201 PSP-NPKPHTAQSTPSTTSKILPLICPKTTPRNRSHVATSLDNEGTSNKTNPPPQKQFKV 259

Query: 806 XKTTEPQKMRQTHIFPHFTGGARTRP*DHARA 711
             T E     + H FP   G A   P  H RA
Sbjct: 260 TSTNETVTTTRPHKFP-AVGAAPYIPVGHFRA 290


>ref|XP_009347131.1| PREDICTED: uncharacterized protein LOC103938813 [Pyrus x
           bretschneideri]
          Length = 126

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/33 (72%), Positives = 29/33 (87%)
 Frame = -2

Query: 635 ERRKRLGMTDENEGAADLAWSRFQSWMSRYLSA 537
           +RRK +G+TDE+E +  LAWSRFQSWMSRYLSA
Sbjct: 94  KRRKDMGLTDEDEASCQLAWSRFQSWMSRYLSA 126


>gb|KZM96513.1| hypothetical protein DCAR_019755 [Daucus carota subsp. sativus]
          Length = 240

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 25/33 (75%), Positives = 30/33 (90%)
 Frame = -2

Query: 635 ERRKRLGMTDENEGAADLAWSRFQSWMSRYLSA 537
           +RRK +GM D+NE AA+LAWSRFQSWMSRYLS+
Sbjct: 208 KRRKDMGMNDDNEAAAELAWSRFQSWMSRYLSS 240


>ref|XP_017254097.1| PREDICTED: protein usf [Daucus carota subsp. sativus]
          Length = 273

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 25/33 (75%), Positives = 30/33 (90%)
 Frame = -2

Query: 635 ERRKRLGMTDENEGAADLAWSRFQSWMSRYLSA 537
           +RRK +GM D+NE AA+LAWSRFQSWMSRYLS+
Sbjct: 241 KRRKDMGMNDDNEAAAELAWSRFQSWMSRYLSS 273


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