BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00004292
         (596 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AJS14101.1| RNA polymerase II second largest subunit, partial...   342   e-116
gb|AJS14100.1| RNA polymerase II second largest subunit, partial...   339   e-114
gb|AJS14106.1| RNA polymerase II second largest subunit, partial...   336   e-114
gb|AJS14121.1| RNA polymerase II second largest subunit, partial...   338   e-114
gb|AJS14098.1| RNA polymerase II second largest subunit, partial...   334   e-113
emb|CAD91515.1| RNA polymerase II second largest subunit, partia...   342   e-113
gb|AAS86833.1| RNA polymerase II second largest subunit, partial...   342   e-113
gb|AAW22927.1| RNA polymerase II second largest subunit, partial...   342   e-113
gb|AAS86830.1| RPB140, partial [Liquidambar acalycina]                342   e-113
emb|CAD89691.1| RNA polymerase II, second largest subunit, parti...   340   e-113
emb|CAD88602.1| RNA polymerase II second largest subunit, partia...   341   e-113
emb|CAD89519.1| RNA polymerase II second largest subunit, partia...   336   e-112
emb|CAD91516.1| RNA polymerase II second largest subunit, partia...   342   e-112
gb|AAS86829.1| RNA polymerase II second largest subunit, partial...   340   e-112
emb|CAD92460.1| RNA polymerase II, partial [Escallonia sp. Oxelm...   340   e-112
emb|CAD92661.1| RNA polymerase II, partial [Lonicera sp. Oxelman...   333   e-112
gb|AFV74910.1| RNA polymerase II second largest subunit, partial...   338   e-112
gb|AJS14117.1| RNA polymerase II second largest subunit, partial...   337   e-112
gb|AAS86834.1| RNA polymerase II second largest subunit, partial...   339   e-112
gb|AJS14111.1| RNA polymerase II second largest subunit, partial...   337   e-111

>gb|AJS14101.1| RNA polymerase II second largest subunit, partial [Comandra
           umbellata]
          Length = 298

 Score =  342 bits (877), Expect = e-116
 Identities = 169/201 (84%), Positives = 175/201 (87%), Gaps = 3/201 (1%)
 Frame = +1

Query: 1   KKKDIQKLQQRENPEDGGWHDLVANGFXXXXXXXXXXXXXXXXXXNDLVSARLNPDESYS 180
           KKKDIQ LQQRE PEDGGWHDLVA GF                  NDLVSAR+NP+E+YS
Sbjct: 54  KKKDIQALQQRETPEDGGWHDLVAKGFIEYIDTEEEETTMISMTINDLVSARVNPEEAYS 113

Query: 181 DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGXX---FQFRMDTLAYV 351
           +TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMG     +QFRMDTLAYV
Sbjct: 114 ETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYV 173

Query: 352 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLF 531
           LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLF
Sbjct: 174 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLF 233

Query: 532 FRSYRDEEKKMGTLVKEDFGR 594
           FRSYRDEEKKMGTLVKEDFGR
Sbjct: 234 FRSYRDEEKKMGTLVKEDFGR 254


>gb|AJS14100.1| RNA polymerase II second largest subunit, partial [Cervantesia
           tomentosa]
          Length = 391

 Score =  339 bits (870), Expect = e-114
 Identities = 169/201 (84%), Positives = 174/201 (86%), Gaps = 3/201 (1%)
 Frame = +1

Query: 1   KKKDIQKLQQRENPEDGGWHDLVANGFXXXXXXXXXXXXXXXXXXNDLVSARLNPDESYS 180
           KKKDIQ LQQRE  EDGGWHDLVA GF                  NDLVSARLNP+E+YS
Sbjct: 54  KKKDIQILQQRETAEDGGWHDLVAKGFIEYIDTEEEETTMISMTINDLVSARLNPEEAYS 113

Query: 181 DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGXX---FQFRMDTLAYV 351
           +TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMG     +QFRMDTLAYV
Sbjct: 114 ETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYV 173

Query: 352 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLF 531
           LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLF
Sbjct: 174 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLF 233

Query: 532 FRSYRDEEKKMGTLVKEDFGR 594
           FRSYRDEEKKMGTLVKEDFGR
Sbjct: 234 FRSYRDEEKKMGTLVKEDFGR 254


>gb|AJS14106.1| RNA polymerase II second largest subunit, partial [Dulacia candida]
          Length = 306

 Score =  336 bits (861), Expect = e-114
 Identities = 165/201 (82%), Positives = 175/201 (87%), Gaps = 3/201 (1%)
 Frame = +1

Query: 1   KKKDIQKLQQRENPEDGGWHDLVANGFXXXXXXXXXXXXXXXXXXNDLVSARLNPDESYS 180
           KKKDIQ LQQRE+ E+GGWHDLVA GF                  NDLV+AR+NP+E+Y+
Sbjct: 34  KKKDIQALQQRESAEEGGWHDLVAKGFIEYIDTEEEETTMISMTINDLVTARINPEEAYT 93

Query: 181 DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGXX---FQFRMDTLAYV 351
           +TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMG     +QFRMDTLAYV
Sbjct: 94  ETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYV 153

Query: 352 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLF 531
           LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLF
Sbjct: 154 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLF 213

Query: 532 FRSYRDEEKKMGTLVKEDFGR 594
           FRSYRDEEKKMGTLVKEDFGR
Sbjct: 214 FRSYRDEEKKMGTLVKEDFGR 234


>gb|AJS14121.1| RNA polymerase II second largest subunit, partial [Octoknema sp.
           Nickrent 4560]
          Length = 389

 Score =  338 bits (868), Expect = e-114
 Identities = 168/201 (83%), Positives = 174/201 (86%), Gaps = 3/201 (1%)
 Frame = +1

Query: 1   KKKDIQKLQQRENPEDGGWHDLVANGFXXXXXXXXXXXXXXXXXXNDLVSARLNPDESYS 180
           KKKDIQ LQQRE  E+GGWHDLVA GF                  NDLVSARLNP+E+YS
Sbjct: 34  KKKDIQALQQRETAEEGGWHDLVAKGFIEYIDTEEEETTMISMTINDLVSARLNPEEAYS 93

Query: 181 DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGXX---FQFRMDTLAYV 351
           +TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMG     +QFRMDTLAYV
Sbjct: 94  ETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYV 153

Query: 352 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLF 531
           LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLF
Sbjct: 154 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLF 213

Query: 532 FRSYRDEEKKMGTLVKEDFGR 594
           FRSYRDEEKKMGTLVKEDFGR
Sbjct: 214 FRSYRDEEKKMGTLVKEDFGR 234


>gb|AJS14098.1| RNA polymerase II second largest subunit, partial [Anacolosa
           frutescens]
          Length = 295

 Score =  334 bits (857), Expect = e-113
 Identities = 165/201 (82%), Positives = 174/201 (86%), Gaps = 3/201 (1%)
 Frame = +1

Query: 1   KKKDIQKLQQRENPEDGGWHDLVANGFXXXXXXXXXXXXXXXXXXNDLVSARLNPDESYS 180
           KKKDIQ LQQRE+ E+GGWHDLVA GF                  NDL+SAR+NP+E+YS
Sbjct: 34  KKKDIQALQQRESTEEGGWHDLVAKGFIEYIDTEEEETTMISMTINDLISARINPEEAYS 93

Query: 181 DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGXX---FQFRMDTLAYV 351
           +TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMG     +QFRMDTLAYV
Sbjct: 94  ETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYV 153

Query: 352 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLF 531
           LYYPQKPLVTTRAMEHL FRQLPAGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLF
Sbjct: 154 LYYPQKPLVTTRAMEHLDFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLF 213

Query: 532 FRSYRDEEKKMGTLVKEDFGR 594
           FRSYRDEEKKMGTLVKEDFGR
Sbjct: 214 FRSYRDEEKKMGTLVKEDFGR 234


>emb|CAD91515.1| RNA polymerase II second largest subunit, partial [Hedera helix]
          Length = 541

 Score =  342 bits (877), Expect = e-113
 Identities = 168/201 (83%), Positives = 176/201 (87%), Gaps = 3/201 (1%)
 Frame = +1

Query: 1   KKKDIQKLQQRENPEDGGWHDLVANGFXXXXXXXXXXXXXXXXXXNDLVSARLNPDESYS 180
           +KKDIQ LQQRE+PEDGGWHDLVA GF                  NDL+SAR+NP+E+YS
Sbjct: 123 RKKDIQALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMISMTINDLLSARVNPEEAYS 182

Query: 181 DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGXX---FQFRMDTLAYV 351
           DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMG     FQFRMDTLAYV
Sbjct: 183 DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYV 242

Query: 352 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLF 531
           LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRS+F
Sbjct: 243 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSIF 302

Query: 532 FRSYRDEEKKMGTLVKEDFGR 594
           FRSYRDEEKKMGTLVKEDFGR
Sbjct: 303 FRSYRDEEKKMGTLVKEDFGR 323


>gb|AAS86833.1| RNA polymerase II second largest subunit, partial [Rhododendron
           macrophyllum]
          Length = 549

 Score =  342 bits (877), Expect = e-113
 Identities = 169/201 (84%), Positives = 175/201 (87%), Gaps = 3/201 (1%)
 Frame = +1

Query: 1   KKKDIQKLQQRENPEDGGWHDLVANGFXXXXXXXXXXXXXXXXXXNDLVSARLNPDESYS 180
           K+KDIQ LQQRE PEDGGWHDLVA GF                  NDLVSARLNP+E+YS
Sbjct: 123 KRKDIQALQQRETPEDGGWHDLVAKGFIEYIDTEEEETTMISMTINDLVSARLNPEEAYS 182

Query: 181 DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGXX---FQFRMDTLAYV 351
           +TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMG     +QFRMDTLAYV
Sbjct: 183 ETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYV 242

Query: 352 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLF 531
           LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLF
Sbjct: 243 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLF 302

Query: 532 FRSYRDEEKKMGTLVKEDFGR 594
           FRSYRDEEKKMGTLVKEDFGR
Sbjct: 303 FRSYRDEEKKMGTLVKEDFGR 323


>gb|AAW22927.1| RNA polymerase II second largest subunit, partial [Dianthus sp.
           UWG]
          Length = 540

 Score =  342 bits (876), Expect = e-113
 Identities = 170/201 (84%), Positives = 174/201 (86%), Gaps = 3/201 (1%)
 Frame = +1

Query: 1   KKKDIQKLQQRENPEDGGWHDLVANGFXXXXXXXXXXXXXXXXXXNDLVSARLNPDESYS 180
           KKKDI+ LQQRE PEDGGWHDLVA GF                  NDLVSARLNP+ESYS
Sbjct: 123 KKKDIRALQQRETPEDGGWHDLVAKGFIEYIDTEEEETTMISMTINDLVSARLNPEESYS 182

Query: 181 DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGXX---FQFRMDTLAYV 351
            TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMG     +QFRMDTLAYV
Sbjct: 183 GTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYV 242

Query: 352 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLF 531
           LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLF
Sbjct: 243 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLF 302

Query: 532 FRSYRDEEKKMGTLVKEDFGR 594
           FRSYRDEEKKMGTLVKEDFGR
Sbjct: 303 FRSYRDEEKKMGTLVKEDFGR 323


>gb|AAS86830.1| RPB140, partial [Liquidambar acalycina]
          Length = 540

 Score =  342 bits (876), Expect = e-113
 Identities = 168/201 (83%), Positives = 175/201 (87%), Gaps = 3/201 (1%)
 Frame = +1

Query: 1   KKKDIQKLQQRENPEDGGWHDLVANGFXXXXXXXXXXXXXXXXXXNDLVSARLNPDESYS 180
           KKKDIQ LQQRE P+DGGWHDLVA GF                  NDLVSARLNP+E+YS
Sbjct: 123 KKKDIQALQQRETPDDGGWHDLVAKGFIEYVDTEEEETTMISMTINDLVSARLNPEEAYS 182

Query: 181 DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGXX---FQFRMDTLAYV 351
           +TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMG     +QFRMDTLAYV
Sbjct: 183 ETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYV 242

Query: 352 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLF 531
           LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSS+DRGFFRSLF
Sbjct: 243 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLF 302

Query: 532 FRSYRDEEKKMGTLVKEDFGR 594
           FRSYRDEEKKMGTLVKEDFGR
Sbjct: 303 FRSYRDEEKKMGTLVKEDFGR 323


>emb|CAD89691.1| RNA polymerase II, second largest subunit, partial [Escallonia sp.
           Oxelman 2340]
          Length = 508

 Score =  340 bits (873), Expect = e-113
 Identities = 168/201 (83%), Positives = 174/201 (86%), Gaps = 3/201 (1%)
 Frame = +1

Query: 1   KKKDIQKLQQRENPEDGGWHDLVANGFXXXXXXXXXXXXXXXXXXNDLVSARLNPDESYS 180
           KK DIQ LQQRE PEDGGWHDLVA G+                  NDLVSARLNP+E+YS
Sbjct: 60  KKADIQALQQRETPEDGGWHDLVAKGYIEYIDTEEEETTMISMTINDLVSARLNPEEAYS 119

Query: 181 DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGXX---FQFRMDTLAYV 351
           +TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMG     FQFRMDTLAYV
Sbjct: 120 ETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYV 179

Query: 352 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLF 531
           LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSS+DRGFFRSLF
Sbjct: 180 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLF 239

Query: 532 FRSYRDEEKKMGTLVKEDFGR 594
           FRSYRDEEKKMGTLVKEDFGR
Sbjct: 240 FRSYRDEEKKMGTLVKEDFGR 260


>emb|CAD88602.1| RNA polymerase II second largest subunit, partial [Alangium
           platanifolium]
          Length = 540

 Score =  341 bits (874), Expect = e-113
 Identities = 168/201 (83%), Positives = 175/201 (87%), Gaps = 3/201 (1%)
 Frame = +1

Query: 1   KKKDIQKLQQRENPEDGGWHDLVANGFXXXXXXXXXXXXXXXXXXNDLVSARLNPDESYS 180
           KKKDIQ LQQRE PE+GGWHDLVA GF                  NDLVSAR+NP+E+YS
Sbjct: 123 KKKDIQMLQQRETPEEGGWHDLVAKGFIEYIDTEEEETTMISMTINDLVSARINPEEAYS 182

Query: 181 DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGXX---FQFRMDTLAYV 351
           +TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMG     +QFRMDTLAYV
Sbjct: 183 ETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYV 242

Query: 352 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLF 531
           LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLF
Sbjct: 243 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLF 302

Query: 532 FRSYRDEEKKMGTLVKEDFGR 594
           FRSYRDEEKKMGTLVKEDFGR
Sbjct: 303 FRSYRDEEKKMGTLVKEDFGR 323


>emb|CAD89519.1| RNA polymerase II second largest subunit, partial [Davidia
           involucrata]
          Length = 396

 Score =  336 bits (861), Expect = e-112
 Identities = 166/201 (82%), Positives = 174/201 (86%), Gaps = 3/201 (1%)
 Frame = +1

Query: 1   KKKDIQKLQQRENPEDGGWHDLVANGFXXXXXXXXXXXXXXXXXXNDLVSARLNPDESYS 180
           KKKDIQ LQQR+ PE+ GWHDLVA GF                  NDLVSARLNP+E+YS
Sbjct: 123 KKKDIQVLQQRKTPEEVGWHDLVAKGFIEYIDTEEEETTMISMTINDLVSARLNPEEAYS 182

Query: 181 DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGXX---FQFRMDTLAYV 351
           +TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMG     +QFRMDTLAYV
Sbjct: 183 ETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYV 242

Query: 352 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLF 531
           LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSS+DRGFFRSLF
Sbjct: 243 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLF 302

Query: 532 FRSYRDEEKKMGTLVKEDFGR 594
           FRSYRDEEKKMGTLVKEDFGR
Sbjct: 303 FRSYRDEEKKMGTLVKEDFGR 323


>emb|CAD91516.1| RNA polymerase II second largest subunit, partial [Garrya
           elliptica]
          Length = 576

 Score =  342 bits (876), Expect = e-112
 Identities = 168/201 (83%), Positives = 176/201 (87%), Gaps = 3/201 (1%)
 Frame = +1

Query: 1   KKKDIQKLQQRENPEDGGWHDLVANGFXXXXXXXXXXXXXXXXXXNDLVSARLNPDESYS 180
           KKKDIQ LQQRE+PEDGGWHDLVA GF                  NDL+SA+LNP+++YS
Sbjct: 118 KKKDIQALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMISMTINDLLSAKLNPEDAYS 177

Query: 181 DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGXX---FQFRMDTLAYV 351
           DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMG     +QFRMDTLAYV
Sbjct: 178 DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYV 237

Query: 352 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLF 531
           LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLF
Sbjct: 238 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLF 297

Query: 532 FRSYRDEEKKMGTLVKEDFGR 594
           FRSYRDEEKKMGTLVKEDFGR
Sbjct: 298 FRSYRDEEKKMGTLVKEDFGR 318


>gb|AAS86829.1| RNA polymerase II second largest subunit, partial [Astilbe
           chinensis]
          Length = 540

 Score =  340 bits (873), Expect = e-112
 Identities = 169/201 (84%), Positives = 174/201 (86%), Gaps = 3/201 (1%)
 Frame = +1

Query: 1   KKKDIQKLQQRENPEDGGWHDLVANGFXXXXXXXXXXXXXXXXXXNDLVSARLNPDESYS 180
           KKKDIQ LQQRE PEDGGWHDLVA GF                  NDLVSARLNP+E+YS
Sbjct: 123 KKKDIQALQQRETPEDGGWHDLVAKGFIEYVDTEEEETTMISMTINDLVSARLNPEEAYS 182

Query: 181 DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGXX---FQFRMDTLAYV 351
           + YTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMG     +QFRMDTLAYV
Sbjct: 183 EYYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYV 242

Query: 352 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLF 531
           LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLF
Sbjct: 243 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLF 302

Query: 532 FRSYRDEEKKMGTLVKEDFGR 594
           FRSYRDEEKKMGTLVKEDFGR
Sbjct: 303 FRSYRDEEKKMGTLVKEDFGR 323


>emb|CAD92460.1| RNA polymerase II, partial [Escallonia sp. Oxelman 2340]
          Length = 543

 Score =  340 bits (873), Expect = e-112
 Identities = 168/201 (83%), Positives = 174/201 (86%), Gaps = 3/201 (1%)
 Frame = +1

Query: 1   KKKDIQKLQQRENPEDGGWHDLVANGFXXXXXXXXXXXXXXXXXXNDLVSARLNPDESYS 180
           KK DIQ LQQRE PEDGGWHDLVA G+                  NDLVSARLNP+E+YS
Sbjct: 117 KKADIQALQQRETPEDGGWHDLVAKGYIEYIDTEEEETTMISMTINDLVSARLNPEEAYS 176

Query: 181 DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGXX---FQFRMDTLAYV 351
           +TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMG     FQFRMDTLAYV
Sbjct: 177 ETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYV 236

Query: 352 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLF 531
           LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSS+DRGFFRSLF
Sbjct: 237 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSVDRGFFRSLF 296

Query: 532 FRSYRDEEKKMGTLVKEDFGR 594
           FRSYRDEEKKMGTLVKEDFGR
Sbjct: 297 FRSYRDEEKKMGTLVKEDFGR 317


>emb|CAD92661.1| RNA polymerase II, partial [Lonicera sp. Oxelman 2331]
          Length = 349

 Score =  333 bits (855), Expect = e-112
 Identities = 167/201 (83%), Positives = 171/201 (85%), Gaps = 3/201 (1%)
 Frame = +1

Query: 1   KKKDIQKLQQRENPEDGGWHDLVANGFXXXXXXXXXXXXXXXXXXNDLVSARLNPDESYS 180
           KKKDIQ LQ RE+PED GW DLV  GF                  NDLVSAR NP+E+YS
Sbjct: 124 KKKDIQALQTRESPEDAGWRDLVEKGFIEYIDTEEEETTMISMTINDLVSARHNPEEAYS 183

Query: 181 DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGXX---FQFRMDTLAYV 351
           +TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMG     FQFRMDTLAYV
Sbjct: 184 ETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYV 243

Query: 352 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLF 531
           LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLF
Sbjct: 244 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLF 303

Query: 532 FRSYRDEEKKMGTLVKEDFGR 594
           FRSYRDEEKKMGTLVKEDFGR
Sbjct: 304 FRSYRDEEKKMGTLVKEDFGR 324


>gb|AFV74910.1| RNA polymerase II second largest subunit, partial [Champereia
           manillana]
          Length = 482

 Score =  338 bits (866), Expect = e-112
 Identities = 167/201 (83%), Positives = 175/201 (87%), Gaps = 3/201 (1%)
 Frame = +1

Query: 1   KKKDIQKLQQRENPEDGGWHDLVANGFXXXXXXXXXXXXXXXXXXNDLVSARLNPDESYS 180
           KKKDIQ LQQRE+ E+GGWHDLVA G+                  NDLVSARLNP+E+YS
Sbjct: 58  KKKDIQALQQRESAEEGGWHDLVAKGYIEYIDTEEEETTMISMTINDLVSARLNPEEAYS 117

Query: 181 DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGXX---FQFRMDTLAYV 351
           +TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMG     +QFRMDTLAYV
Sbjct: 118 ETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYV 177

Query: 352 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLF 531
           LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLF
Sbjct: 178 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLF 237

Query: 532 FRSYRDEEKKMGTLVKEDFGR 594
           FRSYRDEEKKMGTLVKEDFGR
Sbjct: 238 FRSYRDEEKKMGTLVKEDFGR 258


>gb|AJS14117.1| RNA polymerase II second largest subunit, partial [Minquartia
           guianensis]
          Length = 474

 Score =  337 bits (865), Expect = e-112
 Identities = 167/201 (83%), Positives = 174/201 (86%), Gaps = 3/201 (1%)
 Frame = +1

Query: 1   KKKDIQKLQQRENPEDGGWHDLVANGFXXXXXXXXXXXXXXXXXXNDLVSARLNPDESYS 180
           KKKDIQ LQQRE  E+GGWHDLVA GF                  NDLV+ARLNP+E+YS
Sbjct: 23  KKKDIQALQQRETAEEGGWHDLVAKGFIEYIDTEEEETTMISMTINDLVTARLNPEEAYS 82

Query: 181 DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGXX---FQFRMDTLAYV 351
           +TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMG     +QFRMDTLAYV
Sbjct: 83  ETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYV 142

Query: 352 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLF 531
           LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLF
Sbjct: 143 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLF 202

Query: 532 FRSYRDEEKKMGTLVKEDFGR 594
           FRSYRDEEKKMGTLVKEDFGR
Sbjct: 203 FRSYRDEEKKMGTLVKEDFGR 223


>gb|AAS86834.1| RNA polymerase II second largest subunit, partial [Camellia
           japonica]
          Length = 559

 Score =  339 bits (869), Expect = e-112
 Identities = 166/200 (83%), Positives = 174/200 (87%), Gaps = 3/200 (1%)
 Frame = +1

Query: 1   KKKDIQKLQQRENPEDGGWHDLVANGFXXXXXXXXXXXXXXXXXXNDLVSARLNPDESYS 180
           KKKDIQ LQQRE PEDGGWHDLVA G+                  NDL++ARLNP+E+YS
Sbjct: 142 KKKDIQSLQQRETPEDGGWHDLVAKGYIEYIDTEEEETTMISMTINDLITARLNPEEAYS 201

Query: 181 DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGXX---FQFRMDTLAYV 351
           +TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMG     +QFRMDTLAYV
Sbjct: 202 ETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYV 261

Query: 352 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLF 531
           LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLF
Sbjct: 262 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLF 321

Query: 532 FRSYRDEEKKMGTLVKEDFG 591
           FRSYRDEEKKMGTLVKEDFG
Sbjct: 322 FRSYRDEEKKMGTLVKEDFG 341


>gb|AJS14111.1| RNA polymerase II second largest subunit, partial [Lepionurus
           sylvestris]
          Length = 490

 Score =  337 bits (863), Expect = e-111
 Identities = 166/201 (82%), Positives = 175/201 (87%), Gaps = 3/201 (1%)
 Frame = +1

Query: 1   KKKDIQKLQQRENPEDGGWHDLVANGFXXXXXXXXXXXXXXXXXXNDLVSARLNPDESYS 180
           KKKDIQ LQQRE+ E+GGWHDLVA G+                  NDLV+ARLNP+E+YS
Sbjct: 117 KKKDIQALQQRESAEEGGWHDLVAKGYIEYIDTEEEETTMISMTINDLVTARLNPEEAYS 176

Query: 181 DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGXX---FQFRMDTLAYV 351
           +TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMG     +QFRMDTLAYV
Sbjct: 177 ETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYV 236

Query: 352 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLF 531
           LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRSLF
Sbjct: 237 LYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLF 296

Query: 532 FRSYRDEEKKMGTLVKEDFGR 594
           FRSYRDEEKKMGTLVKEDFGR
Sbjct: 297 FRSYRDEEKKMGTLVKEDFGR 317