BLASTX nr result

ID: Chrysanthemum21_contig00004242 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00004242
         (428 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021977955.1| ER membrane protein complex subunit 2-like [...    69   7e-11
gb|KVI00881.1| Tetratricopeptide-like helical [Cynara cardunculu...    65   6e-10
ref|XP_023773152.1| ER membrane protein complex subunit 2 [Lactu...    64   3e-09
gb|OTG08365.1| putative tetratricopeptide-like helical domain-co...    63   5e-09
ref|XP_021991686.1| ER membrane protein complex subunit 2-like [...    63   6e-09

>ref|XP_021977955.1| ER membrane protein complex subunit 2-like [Helianthus annuus]
 gb|OTG19077.1| putative protein prenylyltransferase superfamily protein
           [Helianthus annuus]
          Length = 298

 Score = 68.6 bits (166), Expect = 7e-11
 Identities = 37/51 (72%), Positives = 42/51 (82%), Gaps = 1/51 (1%)
 Frame = -2

Query: 427 CT-AIGQLTKGKNNEDKEIAGLTAAALENYYKQSSSYKVSLLGSAIKS*KL 278
           CT AIGQLTKGKNNEDKEI+GL AAALE  YKQ S  K+SLLGS +K+ K+
Sbjct: 247 CTCAIGQLTKGKNNEDKEISGLAAAALEKDYKQISPDKLSLLGSTLKTLKI 297


>gb|KVI00881.1| Tetratricopeptide-like helical [Cynara cardunculus var. scolymus]
          Length = 260

 Score = 65.5 bits (158), Expect = 6e-10
 Identities = 35/51 (68%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
 Frame = -2

Query: 427 CT-AIGQLTKGKNNEDKEIAGLTAAALENYYKQSSSYKVSLLGSAIKS*KL 278
           CT AI QLTKG+NNEDKEI+GL AAALE  YKQSS  K+SLL S ++S K+
Sbjct: 209 CTSAIAQLTKGRNNEDKEISGLAAAALEKDYKQSSPSKLSLLSSTLRSLKI 259


>ref|XP_023773152.1| ER membrane protein complex subunit 2 [Lactuca sativa]
 gb|PLY78262.1| hypothetical protein LSAT_1X96700 [Lactuca sativa]
          Length = 297

 Score = 63.9 bits (154), Expect = 3e-09
 Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
 Frame = -2

Query: 427 CT-AIGQLTKGKNNEDKEIAGLTAAALENYYKQSSSYKVSLLGSAIKS*KL 278
           CT AIGQLTKG+NNEDKEI+GL A ALE  YKQ+S  K+ LL S +K+ KL
Sbjct: 247 CTSAIGQLTKGRNNEDKEISGLAAKALEKDYKQNSPEKLDLLASTLKTLKL 297


>gb|OTG08365.1| putative tetratricopeptide-like helical domain-containing protein
           [Helianthus annuus]
          Length = 278

 Score = 63.2 bits (152), Expect = 5e-09
 Identities = 36/51 (70%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
 Frame = -2

Query: 427 CT-AIGQLTKGKNNEDKEIAGLTAAALENYYKQSSSYKVSLLGSAIKS*KL 278
           CT AI QLTKGKNNEDKEI+ L AA LE  YKQ S  KVSLLGS +K+ KL
Sbjct: 227 CTSAIAQLTKGKNNEDKEISRLAAAPLEKDYKQISPDKVSLLGSTLKTMKL 277


>ref|XP_021991686.1| ER membrane protein complex subunit 2-like [Helianthus annuus]
          Length = 298

 Score = 63.2 bits (152), Expect = 6e-09
 Identities = 36/51 (70%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
 Frame = -2

Query: 427 CT-AIGQLTKGKNNEDKEIAGLTAAALENYYKQSSSYKVSLLGSAIKS*KL 278
           CT AI QLTKGKNNEDKEI+ L AA LE  YKQ S  KVSLLGS +K+ KL
Sbjct: 247 CTSAIAQLTKGKNNEDKEISRLAAAPLEKDYKQISPDKVSLLGSTLKTMKL 297


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