BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00004209
         (462 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH87043.1| RNA-processing protein, HAT helix [Cynara cardunc...    83   1e-15
ref|XP_022035507.1| pre-mRNA-processing factor 39 isoform X4 [He...    69   1e-10
ref|XP_022035506.1| pre-mRNA-processing factor 39 isoform X3 [He...    69   1e-10
ref|XP_022035505.1| pre-mRNA-processing factor 39 isoform X2 [He...    69   1e-10
ref|XP_022035504.1| pre-mRNA-processing factor 39 isoform X1 [He...    69   1e-10

>gb|KVH87043.1| RNA-processing protein, HAT helix [Cynara cardunculus var. scolymus]
          Length = 897

 Score = 83.2 bits (204), Expect = 1e-15
 Identities = 53/126 (42%), Positives = 68/126 (53%), Gaps = 15/126 (11%)
 Frame = -2

Query: 347  PVSLESLSLCTQEEEPNDLTHKSSTALEDTMNPSTANQNSATDSPKRPDVTDEHGSE--- 177
            PVSLESLSL T+E+ PN L     +   +  + ST N  SAT+S K+ + T+EHGSE   
Sbjct: 654  PVSLESLSLLTREKGPNVLEDTVPSVNNENPSTSTRNPFSATESAKKQNGTEEHGSESLS 713

Query: 176  -----------TDPPQIPSQNVET-CKTNHMLTASEHVSPEPTAHIVTIAQLPNKDYPTV 33
                       TDP Q  SQN ET CKTNHMLTASE  S E         + P++ +P +
Sbjct: 714  FSPGHRNLREQTDPQQYSSQNPETCCKTNHMLTASEDASAESDGQPRQHHRQPHQGFPLI 773

Query: 32   PNAAQN 15
              +  N
Sbjct: 774  HESTAN 779


>ref|XP_022035507.1| pre-mRNA-processing factor 39 isoform X4 [Helianthus annuus]
 ref|XP_022035508.1| pre-mRNA-processing factor 39 isoform X4 [Helianthus annuus]
          Length = 903

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 51/129 (39%), Positives = 62/129 (48%), Gaps = 19/129 (14%)
 Frame = -2

Query: 338 LESLSLCTQEEEPNDLTHKSSTALEDTMNPSTANQN------SATDSPKRPDVTDEHGSE 177
           LE L    +    ND  H S    + T NPS ++QN      SAT   K  ++  E   E
Sbjct: 612 LEGLKHQPRNLSQNDDLHVSQKDDQITTNPSVSDQNTVPVTESATKQHKADELEPEPEPE 671

Query: 176 TDPPQIPSQNVETCKTNHMLTASEHV----SPEPTA-----HIVTIAQLPNKDYPT---- 36
           TDP QIPS+N ETC+TN+MLTASEHV     P+  A     H+ T    P   YP     
Sbjct: 672 TDPHQIPSRNTETCETNNMLTASEHVPNVQQPQNPATAAQSHVFTHNGQPVVQYPVQSNE 731

Query: 35  VPNAAQNGQ 9
            P   QN Q
Sbjct: 732 QPGVVQNPQ 740


>ref|XP_022035506.1| pre-mRNA-processing factor 39 isoform X3 [Helianthus annuus]
          Length = 920

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 51/129 (39%), Positives = 62/129 (48%), Gaps = 19/129 (14%)
 Frame = -2

Query: 338  LESLSLCTQEEEPNDLTHKSSTALEDTMNPSTANQN------SATDSPKRPDVTDEHGSE 177
            LE L    +    ND  H S    + T NPS ++QN      SAT   K  ++  E   E
Sbjct: 629  LEGLKHQPRNLSQNDDLHVSQKDDQITTNPSVSDQNTVPVTESATKQHKADELEPEPEPE 688

Query: 176  TDPPQIPSQNVETCKTNHMLTASEHV----SPEPTA-----HIVTIAQLPNKDYPT---- 36
            TDP QIPS+N ETC+TN+MLTASEHV     P+  A     H+ T    P   YP     
Sbjct: 689  TDPHQIPSRNTETCETNNMLTASEHVPNVQQPQNPATAAQSHVFTHNGQPVVQYPVQSNE 748

Query: 35   VPNAAQNGQ 9
             P   QN Q
Sbjct: 749  QPGVVQNPQ 757


>ref|XP_022035505.1| pre-mRNA-processing factor 39 isoform X2 [Helianthus annuus]
 gb|OTG29091.1| putative tetratricopeptide-like helical domain-containing protein
            [Helianthus annuus]
          Length = 925

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 51/129 (39%), Positives = 62/129 (48%), Gaps = 19/129 (14%)
 Frame = -2

Query: 338  LESLSLCTQEEEPNDLTHKSSTALEDTMNPSTANQN------SATDSPKRPDVTDEHGSE 177
            LE L    +    ND  H S    + T NPS ++QN      SAT   K  ++  E   E
Sbjct: 634  LEGLKHQPRNLSQNDDLHVSQKDDQITTNPSVSDQNTVPVTESATKQHKADELEPEPEPE 693

Query: 176  TDPPQIPSQNVETCKTNHMLTASEHV----SPEPTA-----HIVTIAQLPNKDYPT---- 36
            TDP QIPS+N ETC+TN+MLTASEHV     P+  A     H+ T    P   YP     
Sbjct: 694  TDPHQIPSRNTETCETNNMLTASEHVPNVQQPQNPATAAQSHVFTHNGQPVVQYPVQSNE 753

Query: 35   VPNAAQNGQ 9
             P   QN Q
Sbjct: 754  QPGVVQNPQ 762


>ref|XP_022035504.1| pre-mRNA-processing factor 39 isoform X1 [Helianthus annuus]
          Length = 926

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 51/129 (39%), Positives = 62/129 (48%), Gaps = 19/129 (14%)
 Frame = -2

Query: 338  LESLSLCTQEEEPNDLTHKSSTALEDTMNPSTANQN------SATDSPKRPDVTDEHGSE 177
            LE L    +    ND  H S    + T NPS ++QN      SAT   K  ++  E   E
Sbjct: 635  LEGLKHQPRNLSQNDDLHVSQKDDQITTNPSVSDQNTVPVTESATKQHKADELEPEPEPE 694

Query: 176  TDPPQIPSQNVETCKTNHMLTASEHV----SPEPTA-----HIVTIAQLPNKDYPT---- 36
            TDP QIPS+N ETC+TN+MLTASEHV     P+  A     H+ T    P   YP     
Sbjct: 695  TDPHQIPSRNTETCETNNMLTASEHVPNVQQPQNPATAAQSHVFTHNGQPVVQYPVQSNE 754

Query: 35   VPNAAQNGQ 9
             P   QN Q
Sbjct: 755  QPGVVQNPQ 763