BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00004125
         (2850 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022011455.1| CRM-domain containing factor CFM2, chloropla...  1150   0.0  
ref|XP_022011454.1| CRM-domain containing factor CFM2, chloropla...  1147   0.0  
gb|OTF94648.1| putative CRM family member 2 [Helianthus annuus]      1095   0.0  
ref|XP_023755834.1| CRM-domain containing factor CFM2, chloropla...  1007   0.0  
ref|XP_023755835.1| CRM-domain containing factor CFM2, chloropla...  1003   0.0  
ref|XP_023755836.1| CRM-domain containing factor CFM2, chloropla...  1001   0.0  
ref|XP_022774445.1| CRM-domain containing factor CFM2, chloropla...   867   0.0  
emb|CBI34982.3| unnamed protein product, partial [Vitis vinifera]     863   0.0  
ref|XP_002275511.1| PREDICTED: CRM-domain containing factor CFM2...   863   0.0  
ref|XP_010660973.1| PREDICTED: CRM-domain containing factor CFM2...   863   0.0  
ref|XP_011047274.1| PREDICTED: chloroplastic group IIA intron sp...   858   0.0  
ref|XP_023908423.1| CRM-domain containing factor CFM2, chloropla...   855   0.0  
ref|XP_023908420.1| CRM-domain containing factor CFM2, chloropla...   855   0.0  
ref|XP_023908422.1| CRM-domain containing factor CFM2, chloropla...   855   0.0  
ref|XP_009762860.1| PREDICTED: chloroplastic group IIA intron sp...   854   0.0  
ref|XP_021299250.1| CRM-domain containing factor CFM2, chloropla...   854   0.0  
ref|XP_017611529.1| PREDICTED: CRM-domain containing factor CFM2...   852   0.0  
ref|XP_012483758.1| PREDICTED: chloroplastic group IIA intron sp...   850   0.0  
gb|PHT91786.1| hypothetical protein T459_06899 [Capsicum annuum]      851   0.0  
ref|XP_016668305.1| PREDICTED: CRM-domain containing factor CFM2...   850   0.0  

>ref|XP_022011455.1| CRM-domain containing factor CFM2, chloroplastic isoform X2
            [Helianthus annuus]
          Length = 1013

 Score = 1150 bits (2976), Expect = 0.0
 Identities = 608/828 (73%), Positives = 674/828 (81%), Gaps = 3/828 (0%)
 Frame = -1

Query: 2850 RRLRGVGIGIKTRLKIGKAGITEGIVHGIHERWRRNELVKIVCEDMCRLNMKRTHDLLEI 2671
            RRLR +GI IKTRLKIGKAGITEGIV+GIHERWRR ELVKIVCED+CRLNMKRTHDLLE 
Sbjct: 175  RRLRSLGIAIKTRLKIGKAGITEGIVNGIHERWRRTELVKIVCEDLCRLNMKRTHDLLES 234

Query: 2670 KTGGLVVWRAGSIIILYRGADYKYPYFFVNNNKPNDAXXXXXXXXXXXXXXXDVQESYSI 2491
            KTGGLV+WRAGSIIILYRGADYKYPYFF+N  KPNDA                 +ES SI
Sbjct: 235  KTGGLVIWRAGSIIILYRGADYKYPYFFINKQKPNDASADDPTSPSTDSEEGGGEESESI 294

Query: 2490 GTDDVGSDGQTKMTQTPLIKGVGSRTRVRFQLPGEAQLAEEADQLLHGLGPRFTDWYGYD 2311
            G+         K TQ PLI+GVGSRTRVRFQLPGEAQLAEEADQLL GLGPRFTDWYGY+
Sbjct: 295  GS---------KETQPPLIQGVGSRTRVRFQLPGEAQLAEEADQLLDGLGPRFTDWYGYE 345

Query: 2310 PLPVDADLLPAVVPGYRKPFRLLPFGVQSTLTNDEMTTLRRLGRPLPCHFALGRNRKHQG 2131
            PLPVDADLLPAVVPGYRKPFRLLPFGV+  LTNDEMTTLRRLGRPLPCHFALGRNRK QG
Sbjct: 346  PLPVDADLLPAVVPGYRKPFRLLPFGVKPKLTNDEMTTLRRLGRPLPCHFALGRNRKLQG 405

Query: 2130 LAAAILKLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLLTRDKEYIVLYRGKDFL 1951
            LAAAILKLWEKCEIAKIAVK+GVQNTNS LMAEELKWLTGGTLLTRD+EYIVLYRGKDFL
Sbjct: 406  LAAAILKLWEKCEIAKIAVKKGVQNTNSVLMAEELKWLTGGTLLTRDREYIVLYRGKDFL 465

Query: 1950 PATVSSAIEQRRNRGVDVLERKK-LSRSSDVQENKSKEIGSSSAAEPSGMRDQKLELAIE 1774
            PATVSSAIEQRR+RGVD LERKK  + SSDVQENK KEI + SAA   G+RDQKLE+AIE
Sbjct: 466  PATVSSAIEQRRDRGVDALERKKSAASSSDVQENKDKEIENPSAAVTDGIRDQKLEIAIE 525

Query: 1773 QRKKKSREAAIKKTTSKLSQAXXXXXXXXXXXXXXXXXXXXXXXEVDKEGITEEERYMLR 1594
            QRK++SREAAIKKT+SKLSQA                       E DKEGITEEER+MLR
Sbjct: 526  QRKQRSREAAIKKTSSKLSQALVDKERAEKLLEELEKKETKQQVEADKEGITEEERFMLR 585

Query: 1593 KVGLKMRPFLLLGRRGVFDGTVENMHLHWKYRELVKILSGETNIDELHAAARTLEAESGG 1414
            KVG+KMRPFLLLGRRGVFDGTVENMHLHWKYRELV+IL GET+IDE+HA ARTLE+ESGG
Sbjct: 586  KVGMKMRPFLLLGRRGVFDGTVENMHLHWKYRELVRILCGETSIDEVHAIARTLESESGG 645

Query: 1413 ILVAVERVRRGHAIIVYRGKNYKRPATLRPQTLLNKREALHRSIEAQRRESLKLQVLKLG 1234
            +L+AVER+R+GHAIIVYRGKNYKRPA+LRPQTLLNKREAL RSIEAQRRESLKL VLKLG
Sbjct: 646  VLIAVERMRKGHAIIVYRGKNYKRPASLRPQTLLNKREALKRSIEAQRRESLKLHVLKLG 705

Query: 1233 KNVEELKLKLAKSEDIISNAEKDQNIRLEMKSLSAEYGRPDVDLEGYESNSSDQDDVQER 1054
            KNVEELKLKLA SE+I  + +KDQN +L++ S S+EY  PD DLE Y+SN +DQD+ Q R
Sbjct: 706  KNVEELKLKLATSEEISIHGQKDQNTQLDIISPSSEYTEPDSDLEVYKSNPTDQDNGQAR 765

Query: 1053 EFDGGELVFSNENDSLKASEESLETDNENLPKVSPTEQVEKDEFEFTEDNLKPSIELVKG 874
            E   G + FSN +D + AS+E+                   +E +FTE N  PS   V+G
Sbjct: 766  ELQEGAIDFSNTDDGISASQEN-----------------PANESDFTEANSDPSSLSVEG 808

Query: 873  KNETEEANMLNASTFPDPYKLEVSSSTEPCVSVTRSDVPSSPVHGSGVNESNGKQRRSAL 694
             NE+E     + S  PD +KLE +SS + CVSV RS+VP SP +   VNESNGK RRS L
Sbjct: 809  PNESENHKTQSTSISPDAFKLEETSSADLCVSVMRSEVPFSPANKPQVNESNGKLRRSVL 868

Query: 693  LSNKERLLLRKQALKMKKRPVLAVGRSNIVSGVAKTIKTHFQKHPLAIVNIKGRARGTSV 514
            LSN+ERLLLRKQALKMKKRPVLAVGRSNIVSGVAKTIKTHFQK+PLAIVNIKGRA+GTS 
Sbjct: 869  LSNQERLLLRKQALKMKKRPVLAVGRSNIVSGVAKTIKTHFQKYPLAIVNIKGRAKGTSA 928

Query: 513  QEVVSKLEEATGAILVSQEPSKVILYRGWGAST--TQDSNQSGVKQNP 376
            QE+VSKLEEATGAILVSQEP+K+ILYRGWGA+T  T +SNQ+  K+ P
Sbjct: 929  QELVSKLEEATGAILVSQEPNKIILYRGWGATTTVTHNSNQTSGKREP 976


>ref|XP_022011454.1| CRM-domain containing factor CFM2, chloroplastic isoform X1
            [Helianthus annuus]
          Length = 1015

 Score = 1147 bits (2967), Expect = 0.0
 Identities = 609/830 (73%), Positives = 673/830 (81%), Gaps = 5/830 (0%)
 Frame = -1

Query: 2850 RRLRGVGIGIKTRLKIGKAGITEGIVHGIHERWRRNELVKIVCEDMCRLNMKRTHDLLEI 2671
            RRLR +GI IKTRLKIGKAGITEGIV+GIHERWRR ELVKIVCED+CRLNMKRTHDLLE 
Sbjct: 175  RRLRSLGIAIKTRLKIGKAGITEGIVNGIHERWRRTELVKIVCEDLCRLNMKRTHDLLES 234

Query: 2670 KTGGLVVWRAGSIIILYRGADYKYPYFFVNNNKPNDAXXXXXXXXXXXXXXXDVQESYSI 2491
            KTGGLV+WRAGSIIILYRGADYKYPYFF+N  KPNDA                 +ES SI
Sbjct: 235  KTGGLVIWRAGSIIILYRGADYKYPYFFINKQKPNDASADDPTSPSTDSEEGGGEESESI 294

Query: 2490 GTDDVGSDGQTKMTQTPLIKGVGSRTRVRFQLPGEAQLAEEADQLLHGLGPRFTDWYGYD 2311
            G+         K TQ PLI+GVGSRTRVRFQLPGEAQLAEEADQLL GLGPRFTDWYGY+
Sbjct: 295  GS---------KETQPPLIQGVGSRTRVRFQLPGEAQLAEEADQLLDGLGPRFTDWYGYE 345

Query: 2310 PLPVDADLLPAVVPGYRKPFRLLPFGVQSTLTNDEMTTLRRLGRPLPCHFALGRNRKHQG 2131
            PLPVDADLLPAVVPGYRKPFRLLPFGV+  LTNDEMTTLRRLGRPLPCHFALGRNRK QG
Sbjct: 346  PLPVDADLLPAVVPGYRKPFRLLPFGVKPKLTNDEMTTLRRLGRPLPCHFALGRNRKLQG 405

Query: 2130 LAAAILKLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLLTRDKEYIVLYRGKDFL 1951
            LAAAILKLWEKCEIAKIAVK+GVQNTNS LMAEELKWLTGGTLLTRD+EYIVLYRGKDFL
Sbjct: 406  LAAAILKLWEKCEIAKIAVKKGVQNTNSVLMAEELKWLTGGTLLTRDREYIVLYRGKDFL 465

Query: 1950 PATVSSAIEQRRNRGVDVLERKK-LSRSSDVQENKSKEIGSSSAAEPSGMRDQKLELAIE 1774
            PATVSSAIEQRR+RGVD LERKK  + SSDVQENK KEI + SAA   G+RDQKLE+AIE
Sbjct: 466  PATVSSAIEQRRDRGVDALERKKSAASSSDVQENKDKEIENPSAAVTDGIRDQKLEIAIE 525

Query: 1773 QRKKKSREAAIKKTTSKLSQAXXXXXXXXXXXXXXXXXXXXXXXEVDKEGITEEERYMLR 1594
            QRK++SREAAIKKT+SKLSQA                       E DKEGITEEER+MLR
Sbjct: 526  QRKQRSREAAIKKTSSKLSQALVDKERAEKLLEELEKKETKQQVEADKEGITEEERFMLR 585

Query: 1593 KVGLKMRPFLLLGRRGVFDGTVENMHLHWKYRELVKILSGETNIDELHAAARTLEAESGG 1414
            KVG+KMRPFLLLGRRGVFDGTVENMHLHWKYRELV+IL GET+IDE+HA ARTLE+ESGG
Sbjct: 586  KVGMKMRPFLLLGRRGVFDGTVENMHLHWKYRELVRILCGETSIDEVHAIARTLESESGG 645

Query: 1413 ILVAVERVRRGHAIIVYRGKNYKRPATLRPQTLLNKREALHRSIEAQRRESLKLQVLKLG 1234
            +L+AVER+R+GHAIIVYRGKNYKRPA+LRPQTLLNKREAL RSIEAQRRESLKL VLKLG
Sbjct: 646  VLIAVERMRKGHAIIVYRGKNYKRPASLRPQTLLNKREALKRSIEAQRRESLKLHVLKLG 705

Query: 1233 KNVEELKLKLAKSEDIISNAEKDQNIRLEMK--SLSAEYGRPDVDLEGYESNSSDQDDVQ 1060
            KNVEELKLKLA SE+I  + +KDQN +LE    S S+EY  PD DLE Y+SN +DQD+ Q
Sbjct: 706  KNVEELKLKLATSEEISIHGQKDQNTQLEQDIISPSSEYTEPDSDLEVYKSNPTDQDNGQ 765

Query: 1059 EREFDGGELVFSNENDSLKASEESLETDNENLPKVSPTEQVEKDEFEFTEDNLKPSIELV 880
             RE   G + FSN +D + AS+E+                   +E +FTE N  PS   V
Sbjct: 766  ARELQEGAIDFSNTDDGISASQEN-----------------PANESDFTEANSDPSSLSV 808

Query: 879  KGKNETEEANMLNASTFPDPYKLEVSSSTEPCVSVTRSDVPSSPVHGSGVNESNGKQRRS 700
            +G NE+E     + S  PD +KLE +SS + CVSV RS+VP SP +   VNESNGK RRS
Sbjct: 809  EGPNESENHKTQSTSISPDAFKLEETSSADLCVSVMRSEVPFSPANKPQVNESNGKLRRS 868

Query: 699  ALLSNKERLLLRKQALKMKKRPVLAVGRSNIVSGVAKTIKTHFQKHPLAIVNIKGRARGT 520
             LLSN+ERLLLRKQALKMKKRPVLAVGRSNIVSGVAKTIKTHFQK+PLAIVNIKGRA+GT
Sbjct: 869  VLLSNQERLLLRKQALKMKKRPVLAVGRSNIVSGVAKTIKTHFQKYPLAIVNIKGRAKGT 928

Query: 519  SVQEVVSKLEEATGAILVSQEPSKVILYRGWGAST--TQDSNQSGVKQNP 376
            S QE+VSKLEEATGAILVSQEP+K+ILYRGWGA+T  T +SNQ+  K+ P
Sbjct: 929  SAQELVSKLEEATGAILVSQEPNKIILYRGWGATTTVTHNSNQTSGKREP 978


>gb|OTF94648.1| putative CRM family member 2 [Helianthus annuus]
          Length = 1029

 Score = 1095 bits (2831), Expect = 0.0
 Identities = 581/791 (73%), Positives = 640/791 (80%), Gaps = 3/791 (0%)
 Frame = -1

Query: 2850 RRLRGVGIGIKTRLKIGKAGITEGIVHGIHERWRRNELVKIVCEDMCRLNMKRTHDLLEI 2671
            RRLR +GI IKTRLKIGKAGITEGIV+GIHERWRR ELVKIVCED+CRLNMKRTHDLLE 
Sbjct: 175  RRLRSLGIAIKTRLKIGKAGITEGIVNGIHERWRRTELVKIVCEDLCRLNMKRTHDLLES 234

Query: 2670 KTGGLVVWRAGSIIILYRGADYKYPYFFVNNNKPNDAXXXXXXXXXXXXXXXDVQESYSI 2491
            KTGGLV+WRAGSIIILYRGADYKYPYFF+N  KPNDA                 +ES SI
Sbjct: 235  KTGGLVIWRAGSIIILYRGADYKYPYFFINKQKPNDASADDPTSPSTDSEEGGGEESESI 294

Query: 2490 GTDDVGSDGQTKMTQTPLIKGVGSRTRVRFQLPGEAQLAEEADQLLHGLGPRFTDWYGYD 2311
            G+         K TQ PLI+GVGSRTRVRFQLPGEAQLAEEADQLL GLGPRFTDWYGY+
Sbjct: 295  GS---------KETQPPLIQGVGSRTRVRFQLPGEAQLAEEADQLLDGLGPRFTDWYGYE 345

Query: 2310 PLPVDADLLPAVVPGYRKPFRLLPFGVQSTLTNDEMTTLRRLGRPLPCHFALGRNRKHQG 2131
            PLPVDADLLPAVVPGYRKPFRLLPFGV+  LTNDEMTTLRRLGRPLPCHFALGRNRK QG
Sbjct: 346  PLPVDADLLPAVVPGYRKPFRLLPFGVKPKLTNDEMTTLRRLGRPLPCHFALGRNRKLQG 405

Query: 2130 LAAAILKLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLLTRDKEYIVLYRGKDFL 1951
            LAAAILKLWEKCEIAKIAVK+GVQNTNS LMAEELKWLTGGTLLTRD+EYIVLYRGKDFL
Sbjct: 406  LAAAILKLWEKCEIAKIAVKKGVQNTNSVLMAEELKWLTGGTLLTRDREYIVLYRGKDFL 465

Query: 1950 PATVSSAIEQRRNRGVDVLERKK-LSRSSDVQENKSKEIGSSSAAEPSGMRDQKLELAIE 1774
            PATVSSAIEQRR+RGVD LERKK  + SSDVQENK KEI + SAA   G+RDQKLE+AIE
Sbjct: 466  PATVSSAIEQRRDRGVDALERKKSAASSSDVQENKDKEIENPSAAVTDGIRDQKLEIAIE 525

Query: 1773 QRKKKSREAAIKKTTSKLSQAXXXXXXXXXXXXXXXXXXXXXXXEVDKEGITEEERYMLR 1594
            QRK++SREAAIKKT+SKLSQA                       E DKEGITEEER+MLR
Sbjct: 526  QRKQRSREAAIKKTSSKLSQALVDKERAEKLLEELEKKETKQQVEADKEGITEEERFMLR 585

Query: 1593 KVGLKMRPFLLLGRRGVFDGTVENMHLHWKYRELVKILSGETNIDELHAAARTLEAESGG 1414
            KVG+KMRPFLLLGRRGVFDGTVENMHLHWKYRELV+IL GET+IDE+HA ARTLE+ESGG
Sbjct: 586  KVGMKMRPFLLLGRRGVFDGTVENMHLHWKYRELVRILCGETSIDEVHAIARTLESESGG 645

Query: 1413 ILVAVERVRRGHAIIVYRGKNYKRPATLRPQTLLNKREALHRSIEAQRRESLKLQVLKLG 1234
            +L+AVER+R+GHAIIVYRGKNYKRPA+LRPQTLLNKREAL RSIEAQRRESLKL VLKLG
Sbjct: 646  VLIAVERMRKGHAIIVYRGKNYKRPASLRPQTLLNKREALKRSIEAQRRESLKLHVLKLG 705

Query: 1233 KNVEELKLKLAKSEDIISNAEKDQNIRLEMK--SLSAEYGRPDVDLEGYESNSSDQDDVQ 1060
            KNVEELKLKLA SE+I  + +KDQN +LE    S S+EY  PD DLE Y+SN +DQD+ Q
Sbjct: 706  KNVEELKLKLATSEEISIHGQKDQNTQLEQDIISPSSEYTEPDSDLEVYKSNPTDQDNGQ 765

Query: 1059 EREFDGGELVFSNENDSLKASEESLETDNENLPKVSPTEQVEKDEFEFTEDNLKPSIELV 880
             RE   G + FSN +D + AS+E+                   +E +FTE N  PS   V
Sbjct: 766  ARELQEGAIDFSNTDDGISASQEN-----------------PANESDFTEANSDPSSLSV 808

Query: 879  KGKNETEEANMLNASTFPDPYKLEVSSSTEPCVSVTRSDVPSSPVHGSGVNESNGKQRRS 700
            +G NE+E     + S  PD +KLE +SS + CVSV RS+VP SP +   VNESNGK RRS
Sbjct: 809  EGPNESENHKTQSTSISPDAFKLEETSSADLCVSVMRSEVPFSPANKPQVNESNGKLRRS 868

Query: 699  ALLSNKERLLLRKQALKMKKRPVLAVGRSNIVSGVAKTIKTHFQKHPLAIVNIKGRARGT 520
             LLSN+ERLLLRKQALKMKKRPVLAVGRSNIVSGVAKTIKTHFQK+PLAIVNIKGRA+GT
Sbjct: 869  VLLSNQERLLLRKQALKMKKRPVLAVGRSNIVSGVAKTIKTHFQKYPLAIVNIKGRAKGT 928

Query: 519  SVQEVVSKLEE 487
            S QE+VSKLE+
Sbjct: 929  SAQELVSKLEQ 939


>ref|XP_023755834.1| CRM-domain containing factor CFM2, chloroplastic isoform X1 [Lactuca
            sativa]
 gb|PLY91455.1| hypothetical protein LSAT_0X16540 [Lactuca sativa]
          Length = 1023

 Score = 1007 bits (2603), Expect = 0.0
 Identities = 553/822 (67%), Positives = 620/822 (75%), Gaps = 9/822 (1%)
 Frame = -1

Query: 2850 RRLRGVGIGIKTRLKIGKAGITEGIVHGIHERWRRNELVKIVCEDMCRLNMKRTHDLLEI 2671
            RRLRG+GI +K +LKIGKAGITEGIV+GIHERWRR ELVKIVCED+CRLNM+RTHDLLE 
Sbjct: 178  RRLRGLGIAVKQKLKIGKAGITEGIVNGIHERWRRTELVKIVCEDLCRLNMRRTHDLLER 237

Query: 2670 KTGGLVVWRAGSIIILYRGADYKYPYFFVNNNKPNDAXXXXXXXXXXXXXXXDVQESYSI 2491
            KTGGLVVWR+GSIIILYRG DYKYPYFFV   KPNDA                V E  S 
Sbjct: 238  KTGGLVVWRSGSIIILYRGTDYKYPYFFV---KPNDAS---------------VDEPMSS 279

Query: 2490 GTDDVGSDGQTKMT---QTPLIKGVGSRTRVRFQLPGEAQLAEEADQLLHGLGPRFTDWY 2320
             T+   S  QT+ T   + PLI+GVGSRTRVRFQLPGE QL EE+DQLL GLGPRFTDWY
Sbjct: 280  STNSEDSGVQTRTTTEPEPPLIQGVGSRTRVRFQLPGEKQLMEESDQLLQGLGPRFTDWY 339

Query: 2319 GYDPLPVDADLLPAVVPGYRKPFRLLPFGVQSTLTNDEMTTLRRLGRPLPCHFALGRNRK 2140
            GY+PLPVDADLLPA+VPGYRKPFRLLPFGVQ  LTNDEMT LRRLGRPLPCHFALGRNRK
Sbjct: 340  GYEPLPVDADLLPAIVPGYRKPFRLLPFGVQPKLTNDEMTILRRLGRPLPCHFALGRNRK 399

Query: 2139 HQGLAAAILKLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLLTRDKEYIVLYRGK 1960
            HQGLAAAILKLWEKCEIAKIAVK+GVQNTNSELMA+EL+WLTGGTLLTRDKEYIVLYRGK
Sbjct: 400  HQGLAAAILKLWEKCEIAKIAVKKGVQNTNSELMAKELQWLTGGTLLTRDKEYIVLYRGK 459

Query: 1959 DFLPATVSSAIEQRRNRGVDVLERKKL--SRSSDVQENKSKEIGSSSAAEPSGMRDQKLE 1786
            DFLP++VSSAIEQRRN GVD  +R K   S S+  Q N+     SSS A+   + DQKLE
Sbjct: 460  DFLPSSVSSAIEQRRNHGVDEFQRNKTPNSSSNPPQINQDNGTQSSSVAKIGDINDQKLE 519

Query: 1785 LAIEQRKKKSREAAIKKTTSKLSQAXXXXXXXXXXXXXXXXXXXXXXXEVDKEGITEEER 1606
            +AIEQRK++SREAAIKKT+SKLSQA                       EVDKEGITEEER
Sbjct: 520  IAIEQRKQRSREAAIKKTSSKLSQALENKEKAEKLLEELEKEETKQQFEVDKEGITEEER 579

Query: 1605 YMLRKVGLKMRPFLLLGRRGVFDGTVENMHLHWKYRELVKILSGETNIDELHAAARTLEA 1426
            YMLRKVG+KM+PFLLLGRRGVFDGTVENMHLHWKYRELVKILSGE+ IDELHA ARTLEA
Sbjct: 580  YMLRKVGMKMKPFLLLGRRGVFDGTVENMHLHWKYRELVKILSGESTIDELHAIARTLEA 639

Query: 1425 ESGGILVAVERVRRGHAIIVYRGKNYKRPATLRPQTLLNKREALHRSIEAQRRESLKLQV 1246
            ESGGILVA+ER+R+GHAII+YRGKNYKRP +LRPQTLLNKREAL RSIEAQR +SLKL V
Sbjct: 640  ESGGILVAIERMRKGHAIIIYRGKNYKRPPSLRPQTLLNKREALKRSIEAQRTQSLKLHV 699

Query: 1245 LKLGKNVEELKLKLAKSEDIISNAEKDQNIRLEMKSLSAEYGRPDVDLEGYESNSSDQDD 1066
            LKLGKNVEELKLKLAK+E+I    EKD+    + + +S +    D   E      S QD+
Sbjct: 700  LKLGKNVEELKLKLAKNEEICIQGEKDEVAEAKNEEISIQ-DEKDEMAEAKNEEISIQDE 758

Query: 1065 VQE-REFDGGELVFSNENDSLKASEESLETDNENLPKVSPTEQVEKDEFEFTEDNLKPSI 889
              E  E    E+    E D +        T+   + K S +E +E+        +  P+ 
Sbjct: 759  KDEMAEAKNEEISIHGEKDDV--------TEEHEMEKSSSSECMEESNTNIELHSPNPT- 809

Query: 888  ELVKGKNETEEANMLNASTFPDPYKLEVSSSTEPCVSVTRSDVPSSPVHGS---GVNESN 718
              +K     E+ + L+ S   D +    SS    C      D  +S +       V ESN
Sbjct: 810  -TLKEIEVDEDEDDLHFSNKNDGFLQFASSEETNCQKHADKDESASLLTNKTELRVTESN 868

Query: 717  GKQRRSALLSNKERLLLRKQALKMKKRPVLAVGRSNIVSGVAKTIKTHFQKHPLAIVNIK 538
            G+Q RSALLSNKERLLLRKQALK  KRPVLAVGRSNIVSGVAKTIKTHFQKHPLAIVNIK
Sbjct: 869  GRQHRSALLSNKERLLLRKQALKTTKRPVLAVGRSNIVSGVAKTIKTHFQKHPLAIVNIK 928

Query: 537  GRARGTSVQEVVSKLEEATGAILVSQEPSKVILYRGWGASTT 412
            GRA+GTSVQ++VSKLEEATGAILVSQEP+KVILYRGWGA+TT
Sbjct: 929  GRAKGTSVQQLVSKLEEATGAILVSQEPNKVILYRGWGATTT 970


>ref|XP_023755835.1| CRM-domain containing factor CFM2, chloroplastic isoform X2 [Lactuca
            sativa]
          Length = 1006

 Score = 1003 bits (2593), Expect = 0.0
 Identities = 555/824 (67%), Positives = 620/824 (75%), Gaps = 11/824 (1%)
 Frame = -1

Query: 2850 RRLRGVGIGIKTRLKIGKAGITEGIVHGIHERWRRNELVKIVCEDMCRLNMKRTHDLLEI 2671
            RRLRG+GI +K +LKIGKAGITEGIV+GIHERWRR ELVKIVCED+CRLNM+RTHDLLE 
Sbjct: 178  RRLRGLGIAVKQKLKIGKAGITEGIVNGIHERWRRTELVKIVCEDLCRLNMRRTHDLLER 237

Query: 2670 KTGGLVVWRAGSIIILYRGADYKYPYFFVNNNKPNDAXXXXXXXXXXXXXXXDVQESYSI 2491
            KTGGLVVWR+GSIIILYRG DYKYPYFFV   KPNDA                V E  S 
Sbjct: 238  KTGGLVVWRSGSIIILYRGTDYKYPYFFV---KPNDAS---------------VDEPMSS 279

Query: 2490 GTDDVGSDGQTKMT---QTPLIKGVGSRTRVRFQLPGEAQLAEEADQLLHGLGPRFTDWY 2320
             T+   S  QT+ T   + PLI+GVGSRTRVRFQLPGE QL EE+DQLL GLGPRFTDWY
Sbjct: 280  STNSEDSGVQTRTTTEPEPPLIQGVGSRTRVRFQLPGEKQLMEESDQLLQGLGPRFTDWY 339

Query: 2319 GYDPLPVDADLLPAVVPGYRKPFRLLPFGVQSTLTNDEMTTLRRLGRPLPCHFALGRNRK 2140
            GY+PLPVDADLLPA+VPGYRKPFRLLPFGVQ  LTNDEMT LRRLGRPLPCHFALGRNRK
Sbjct: 340  GYEPLPVDADLLPAIVPGYRKPFRLLPFGVQPKLTNDEMTILRRLGRPLPCHFALGRNRK 399

Query: 2139 HQGLAAAILKLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLLTRDKEYIVLYRGK 1960
            HQGLAAAILKLWEKCEIAKIAVK+GVQNTNSELMA+EL+WLTGGTLLTRDKEYIVLYRGK
Sbjct: 400  HQGLAAAILKLWEKCEIAKIAVKKGVQNTNSELMAKELQWLTGGTLLTRDKEYIVLYRGK 459

Query: 1959 DFLPATVSSAIEQRRNRGVDVLERKKL--SRSSDVQENKSKEIGSSSAAEPSGMRDQKLE 1786
            DFLP++VSSAIEQRRN GVD  +R K   S S+  Q N+     SSS A+   + DQKLE
Sbjct: 460  DFLPSSVSSAIEQRRNHGVDEFQRNKTPNSSSNPPQINQDNGTQSSSVAKIGDINDQKLE 519

Query: 1785 LAIEQRKKKSREAAIKKTTSKLSQAXXXXXXXXXXXXXXXXXXXXXXXEVDKEGITEEER 1606
            +AIEQRK++SREAAIKKT+SKLSQA                       EVDKEGITEEER
Sbjct: 520  IAIEQRKQRSREAAIKKTSSKLSQALENKEKAEKLLEELEKEETKQQFEVDKEGITEEER 579

Query: 1605 YMLRKVGLKMRPFLLLGRRGVFDGTVENMHLHWKYRELVKILSGETNIDELHAAARTLEA 1426
            YMLRKVG+KM+PFLLLGRRGVFDGTVENMHLHWKYRELVKILSGE+ IDELHA ARTLEA
Sbjct: 580  YMLRKVGMKMKPFLLLGRRGVFDGTVENMHLHWKYRELVKILSGESTIDELHAIARTLEA 639

Query: 1425 ESGGILVAVERVRRGHAIIVYRGKNYKRPATLRPQTLLNKREALHRSIEAQRRESLKLQV 1246
            ESGGILVA+ER+R+GHAII+YRGKNYKRP +LRPQTLLNKREAL RSIEAQR +SLKL V
Sbjct: 640  ESGGILVAIERMRKGHAIIIYRGKNYKRPPSLRPQTLLNKREALKRSIEAQRTQSLKLHV 699

Query: 1245 LKLGKNVEELKLKLAKSEDIISNAEKDQNIRLEMKSLSAEYGRPDVDLEGYESNS--SDQ 1072
            LKLGKNVEELKLKLAK+E+I    EKD+    + + +S +  + ++     E  S   ++
Sbjct: 700  LKLGKNVEELKLKLAKNEEICIQGEKDEVAEAKNEEISIQDEKDEMAEAKNEEISIHGEK 759

Query: 1071 DDVQEREFDGGELVFSNENDSLK-ASEESLETDNENLPKVSPTEQVEKDEFEFTEDNLKP 895
            DDV E            E++  K +S E +E  N N+   SP     K E E  ED    
Sbjct: 760  DDVTE------------EHEMEKSSSSECMEESNTNIELHSPNPTTLK-EIEVDEDE--- 803

Query: 894  SIELVKGKNETEEANMLNASTFPDPYKLEVSSSTEPCVSVTRSDVPSSPVHGS---GVNE 724
                          + L+ S   D +    SS    C      D  +S +       V E
Sbjct: 804  --------------DDLHFSNKNDGFLQFASSEETNCQKHADKDESASLLTNKTELRVTE 849

Query: 723  SNGKQRRSALLSNKERLLLRKQALKMKKRPVLAVGRSNIVSGVAKTIKTHFQKHPLAIVN 544
            SNG+Q RSALLSNKERLLLRKQALK  KRPVLAVGRSNIVSGVAKTIKTHFQKHPLAIVN
Sbjct: 850  SNGRQHRSALLSNKERLLLRKQALKTTKRPVLAVGRSNIVSGVAKTIKTHFQKHPLAIVN 909

Query: 543  IKGRARGTSVQEVVSKLEEATGAILVSQEPSKVILYRGWGASTT 412
            IKGRA+GTSVQ++VSKLEEATGAILVSQEP+KVILYRGWGA+TT
Sbjct: 910  IKGRAKGTSVQQLVSKLEEATGAILVSQEPNKVILYRGWGATTT 953


>ref|XP_023755836.1| CRM-domain containing factor CFM2, chloroplastic isoform X3 [Lactuca
            sativa]
          Length = 989

 Score = 1001 bits (2587), Expect = 0.0
 Identities = 549/821 (66%), Positives = 614/821 (74%), Gaps = 8/821 (0%)
 Frame = -1

Query: 2850 RRLRGVGIGIKTRLKIGKAGITEGIVHGIHERWRRNELVKIVCEDMCRLNMKRTHDLLEI 2671
            RRLRG+GI +K +LKIGKAGITEGIV+GIHERWRR ELVKIVCED+CRLNM+RTHDLLE 
Sbjct: 178  RRLRGLGIAVKQKLKIGKAGITEGIVNGIHERWRRTELVKIVCEDLCRLNMRRTHDLLER 237

Query: 2670 KTGGLVVWRAGSIIILYRGADYKYPYFFVNNNKPNDAXXXXXXXXXXXXXXXDVQESYSI 2491
            KTGGLVVWR+GSIIILYRG DYKYPYFFV   KPNDA                V E  S 
Sbjct: 238  KTGGLVVWRSGSIIILYRGTDYKYPYFFV---KPNDAS---------------VDEPMSS 279

Query: 2490 GTDDVGSDGQTKMT---QTPLIKGVGSRTRVRFQLPGEAQLAEEADQLLHGLGPRFTDWY 2320
             T+   S  QT+ T   + PLI+GVGSRTRVRFQLPGE QL EE+DQLL GLGPRFTDWY
Sbjct: 280  STNSEDSGVQTRTTTEPEPPLIQGVGSRTRVRFQLPGEKQLMEESDQLLQGLGPRFTDWY 339

Query: 2319 GYDPLPVDADLLPAVVPGYRKPFRLLPFGVQSTLTNDEMTTLRRLGRPLPCHFALGRNRK 2140
            GY+PLPVDADLLPA+VPGYRKPFRLLPFGVQ  LTNDEMT LRRLGRPLPCHFALGRNRK
Sbjct: 340  GYEPLPVDADLLPAIVPGYRKPFRLLPFGVQPKLTNDEMTILRRLGRPLPCHFALGRNRK 399

Query: 2139 HQGLAAAILKLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLLTRDKEYIVLYRGK 1960
            HQGLAAAILKLWEKCEIAKIAVK+GVQNTNSELMA+EL+WLTGGTLLTRDKEYIVLYRGK
Sbjct: 400  HQGLAAAILKLWEKCEIAKIAVKKGVQNTNSELMAKELQWLTGGTLLTRDKEYIVLYRGK 459

Query: 1959 DFLPATVSSAIEQRRNRGVDVLERKKLSRSSD--VQENKSKEIGSSSAAEPSGMRDQKLE 1786
            DFLP++VSSAIEQRRN GVD  +R K   SS    Q N+     SSS A+   + DQKLE
Sbjct: 460  DFLPSSVSSAIEQRRNHGVDEFQRNKTPNSSSNPPQINQDNGTQSSSVAKIGDINDQKLE 519

Query: 1785 LAIEQRKKKSREAAIKKTTSKLSQAXXXXXXXXXXXXXXXXXXXXXXXEVDKEGITEEER 1606
            +AIEQRK++SREAAIKKT+SKLSQA                       EVDKEGITEEER
Sbjct: 520  IAIEQRKQRSREAAIKKTSSKLSQALENKEKAEKLLEELEKEETKQQFEVDKEGITEEER 579

Query: 1605 YMLRKVGLKMRPFLLLGRRGVFDGTVENMHLHWKYRELVKILSGETNIDELHAAARTLEA 1426
            YMLRKVG+KM+PFLLLGRRGVFDGTVENMHLHWKYRELVKILSGE+ IDELHA ARTLEA
Sbjct: 580  YMLRKVGMKMKPFLLLGRRGVFDGTVENMHLHWKYRELVKILSGESTIDELHAIARTLEA 639

Query: 1425 ESGGILVAVERVRRGHAIIVYRGKNYKRPATLRPQTLLNKREALHRSIEAQRRESLKLQV 1246
            ESGGILVA+ER+R+GHAII+YRGKNYKRP +LRPQTLLNKREAL RSIEAQR +SLKL V
Sbjct: 640  ESGGILVAIERMRKGHAIIIYRGKNYKRPPSLRPQTLLNKREALKRSIEAQRTQSLKLHV 699

Query: 1245 LKLGKNVEELKLKLAKSEDIISNAEKDQNIRLEMKSLSAEYGRPDVDLEGYESNSSDQDD 1066
            LKLGKNVEELKLKLAK+E+I    EKD+          AE    ++ + G + + +++ +
Sbjct: 700  LKLGKNVEELKLKLAKNEEICIQGEKDE---------VAEAKNEEISIHGEKDDVTEEHE 750

Query: 1065 VQEREFDGGELVFSNENDSLKASEESLETDNENLPKVSPTEQVEKDEFEFTEDNLKPSIE 886
            +++                  +S E +E  N N+   SP     K E E  ED       
Sbjct: 751  MEK-----------------SSSSECMEESNTNIELHSPNPTTLK-EIEVDEDE------ 786

Query: 885  LVKGKNETEEANMLNASTFPDPYKLEVSSSTEPCVSVTRSDVPSSPVHGSG---VNESNG 715
                       + L+ S   D +    SS    C      D  +S +       V ESNG
Sbjct: 787  -----------DDLHFSNKNDGFLQFASSEETNCQKHADKDESASLLTNKTELRVTESNG 835

Query: 714  KQRRSALLSNKERLLLRKQALKMKKRPVLAVGRSNIVSGVAKTIKTHFQKHPLAIVNIKG 535
            +Q RSALLSNKERLLLRKQALK  KRPVLAVGRSNIVSGVAKTIKTHFQKHPLAIVNIKG
Sbjct: 836  RQHRSALLSNKERLLLRKQALKTTKRPVLAVGRSNIVSGVAKTIKTHFQKHPLAIVNIKG 895

Query: 534  RARGTSVQEVVSKLEEATGAILVSQEPSKVILYRGWGASTT 412
            RA+GTSVQ++VSKLEEATGAILVSQEP+KVILYRGWGA+TT
Sbjct: 896  RAKGTSVQQLVSKLEEATGAILVSQEPNKVILYRGWGATTT 936


>ref|XP_022774445.1| CRM-domain containing factor CFM2, chloroplastic isoform X3 [Durio
            zibethinus]
          Length = 1047

 Score =  867 bits (2240), Expect = 0.0
 Identities = 488/852 (57%), Positives = 596/852 (69%), Gaps = 28/852 (3%)
 Frame = -1

Query: 2850 RRLRGVGIGIKTRLKIGKAGITEGIVHGIHERWRRNELVKIVCEDMCRLNMKRTHDLLEI 2671
            RRLR VGIG K +LK+GKAGITEGIV+GIHERWRR+E+V+IVCED+C++NMKRTH++LE 
Sbjct: 171  RRLRTVGIGEKRKLKVGKAGITEGIVNGIHERWRRSEVVRIVCEDICKMNMKRTHEVLER 230

Query: 2670 KTGGLVVWRAGSIIILYRGADYKYPYFFVNNNKPNDAXXXXXXXXXXXXXXXDVQESYSI 2491
            KTGGLVVWR+GS IILYRGA+YKYPYF  +  + +D                   ES S 
Sbjct: 231  KTGGLVVWRSGSKIILYRGANYKYPYFLADKIETHDTSSNASPHTNMDNEERHKTESCSP 290

Query: 2490 GTDDVG---SDGQTKMTQTPLIKGVGSRTRVRFQLPGEAQLAEEADQLLHGLGPRFTDWY 2320
              + V     +   KMT+  LI+GVGS  RVRFQLPGEA+L EEAD+LL GLGPRFTDW+
Sbjct: 291  EFNGVKISTPNAPNKMTKPMLIQGVGSPNRVRFQLPGEAELVEEADRLLDGLGPRFTDWW 350

Query: 2319 GYDPLPVDADLLPAVVPGYRKPFRLLPFGVQSTLTNDEMTTLRRLGRPLPCHFALGRNRK 2140
            GY+PLPVD DLLPA++PGYR+PFRLLP+GV+  LTNDEMTTLRRLGRPLPCHFALGRNRK
Sbjct: 351  GYEPLPVDGDLLPAIIPGYRRPFRLLPYGVKPILTNDEMTTLRRLGRPLPCHFALGRNRK 410

Query: 2139 HQGLAAAILKLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLLTRDKEYIVLYRGK 1960
             QGLAA+I+KLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLL RDK++IVLYRGK
Sbjct: 411  LQGLAASIVKLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLLARDKDFIVLYRGK 470

Query: 1959 DFLPATVSSAIEQRRNRGVDVLERK-KLSRS-SDVQENKSKEIGSSSAAEPSGMRDQKLE 1786
            DFLP+ VSSAIE+RR + + V ++  K S+S   VQ   S+   S S +E +  +D +  
Sbjct: 471  DFLPSVVSSAIEERRKQVIHVEKQSAKCSQSWKTVQRVDSECTKSGSESEINSAKDHRSN 530

Query: 1785 LAIEQRKKKSREAAIKKTTSKLSQAXXXXXXXXXXXXXXXXXXXXXXXEVDKEGITEEER 1606
            +  +++  KS EAAI+KT+SKLS A                       E+DKEGIT+EER
Sbjct: 531  IFGDRKNMKSAEAAIRKTSSKLSMALEKKAKAEKLLAGLEQVEIPQQSEIDKEGITQEER 590

Query: 1605 YMLRKVGLKMRPFLLLGRRGVFDGTVENMHLHWKYRELVKILSGETNIDELHAAARTLEA 1426
            YMLRKVGL+M+PFLLLGRRGVFDGTVENMHLHWKYRELVKI+S ETN++E+H  AR LEA
Sbjct: 591  YMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIISKETNVEEVHQVARILEA 650

Query: 1425 ESGGILVAVERVRRGHAIIVYRGKNYKRPATLRPQTLLNKREALHRSIEAQRRESLKLQV 1246
            ESGGILVAVERV +G+AIIVYRGKNYKRP  LRPQTLL KREA+ RS+E QR +SLKL +
Sbjct: 651  ESGGILVAVERVSKGYAIIVYRGKNYKRPTCLRPQTLLTKREAMKRSLEEQRHKSLKLHI 710

Query: 1245 LKLGKNVEELKLKLAKSEDIISNAEKDQN----IRLEMKSLS-AEYGRPDVDLEGYESNS 1081
            LKL +N+ ELK +L   ++  S    +Q+    +  EM+++   E  R D+     E  +
Sbjct: 711  LKLTRNINELKHQLVVDKEASSIQTAEQSRLRLVEEEMEAIQPVECARSDI-----EFPA 765

Query: 1080 SDQDDVQEREFDGGELVFSNENDSLKASEESLETDNENLPKVSPTEQVEKDEFEFTEDNL 901
            S     + R+ DG +   + +ND + A+    +   + L + S      K   +     L
Sbjct: 766  SPGGHAKARDKDGSDSTLT-KNDRMVAAISIRQPSEQELVEPSSIHDGIKTH-KAESGTL 823

Query: 900  KPSIELVKGKNETE----EANMLNASTFPDPYKLE------------VSSSTEPCVSVTR 769
              S+   K K E      +  M+N++++PD  + E            + S+  P  S+  
Sbjct: 824  AESVNRRKHKTELRALHAQVEMVNSTSYPDNIREEEIGCSGTANAEPLVSNNGPMESMLE 883

Query: 768  SDVPSSPVHGSGV--NESNGKQRRSALLSNKERLLLRKQALKMKKRPVLAVGRSNIVSGV 595
            S   +  V  S    N SN        LSNK+RLLLRKQALKMKKRPVLAVGRSNIV+GV
Sbjct: 884  SVNNNLYVSTSSAVENVSNKMASTVKFLSNKDRLLLRKQALKMKKRPVLAVGRSNIVTGV 943

Query: 594  AKTIKTHFQKHPLAIVNIKGRARGTSVQEVVSKLEEATGAILVSQEPSKVILYRGWGAST 415
            AK IK HFQKHPLAIVN+KGRA+GTSVQEVV KL+EATGA+LVSQEPSKVILYRGWGAS 
Sbjct: 944  AKAIKAHFQKHPLAIVNVKGRAKGTSVQEVVLKLQEATGAVLVSQEPSKVILYRGWGAS- 1002

Query: 414  TQDSNQSGVKQN 379
              D    G K+N
Sbjct: 1003 --DELVHGDKRN 1012


>emb|CBI34982.3| unnamed protein product, partial [Vitis vinifera]
          Length = 1028

 Score =  863 bits (2231), Expect = 0.0
 Identities = 482/837 (57%), Positives = 582/837 (69%), Gaps = 27/837 (3%)
 Frame = -1

Query: 2850 RRLRGVGIGIKTRLKIGKAGITEGIVHGIHERWRRNELVKIVCEDMCRLNMKRTHDLLEI 2671
            RRL+G+GI I+ +LK+GKAGITEGIV+GIHERWRR E+VKI CED+C+LNMKRTHD+LE 
Sbjct: 192  RRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNMKRTHDILER 251

Query: 2670 KTGGLVVWRAGSIIILYRGADYKYPYFFVNNNKPNDAXXXXXXXXXXXXXXXDVQESYSI 2491
            KTGGLV+WR+GS IILYRGA+YKYPYF  +NN PND+               D +E  S 
Sbjct: 252  KTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQMNNEEHDGKEVCSS 311

Query: 2490 GTDDVGSDGQ---TKMTQTPLIKGVGSRTRVRFQLPGEAQLAEEADQLLHGLGPRFTDWY 2320
            G  DV S G     K+    LI+GVG  TRVRFQLPGEAQL EEAD+LL GLGPRFTDW+
Sbjct: 312  GKGDVKSAGPMPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADRLLDGLGPRFTDWW 371

Query: 2319 GYDPLPVDADLLPAVVPGYRKPFRLLPFGVQSTLTNDEMTTLRRLGRPLPCHFALGRNRK 2140
            GYDPLP+DADLLPAVVPGYR+PFRLLP+G++  LTNDEMT LRRLGRPLPCHFALGRNRK
Sbjct: 372  GYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGRPLPCHFALGRNRK 431

Query: 2139 HQGLAAAILKLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLLTRDKEYIVLYRGK 1960
             QGLAA+++KLWEKCEIAKIAVKRGVQNTNSE+MAEELK LTGGTLL+RD+E+IV YRGK
Sbjct: 432  LQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKNLTGGTLLSRDREFIVFYRGK 491

Query: 1959 DFLPATVSSAIEQRR----NRGVDVLERKKLSRSSDVQENKSKEIGSSSAAEPSGMRDQK 1792
            DFLP  VSSAIE RR    +RG   ++  +L+ +++  E  + E  S    +  G  DQK
Sbjct: 492  DFLPPAVSSAIEARRKYGIHRGKQKIDHHRLAINAEESELGTSEHASDKDCD--GTDDQK 549

Query: 1791 LELAIEQRKKKSREAAIKKTTSKLSQAXXXXXXXXXXXXXXXXXXXXXXXEVDKEGITEE 1612
                 ++R  +S EA +++T  KLS A                       E+DKEGITEE
Sbjct: 550  TNSLSKRRMLRSAEAVVERTNIKLSMALEKKERAEKLLAELEEAQIPQQPEIDKEGITEE 609

Query: 1611 ERYMLRKVGLKMRPFLLLGRRGVFDGTVENMHLHWKYRELVKILSGETNIDELHAAARTL 1432
            ERYMLRKVGL+M+PFLLLGRRG+FDGTVENMHLHWKYRELVKI+S   +I+++H  ARTL
Sbjct: 610  ERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSIEDIHGVARTL 669

Query: 1431 EAESGGILVAVERVRRGHAIIVYRGKNYKRPATLRPQTLLNKREALHRSIEAQRRESLKL 1252
            EAESGGILVAVERV +G+AII+YRGKNYKRPA+LRPQTLLNKREAL RS+EAQRRESLKL
Sbjct: 670  EAESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLLNKREALKRSLEAQRRESLKL 729

Query: 1251 QVLKLGKNVEELKLKLAKSEDIISNAEKDQNIRLEMKSLSAEYGRPDVDLEGYESNSSDQ 1072
             VL+L +N++ELK +L                                 ++  E+NS   
Sbjct: 730  HVLRLTRNIDELKHQLVSR------------------------------IKDKETNSKQL 759

Query: 1071 DDVQE----REFDGGELVFSNENDSLKASEESLETDNENLPKVSPTEQVEKDEFEFTEDN 904
             D       RE  G +++  + +D + +S +SL+T + N  ++      + D     E N
Sbjct: 760  VDKSRLHLARERYGADVILIHSSDGMDSSRDSLQT-SHNDKRIDFPSMCDSDT---DEAN 815

Query: 903  LKPSIELVKGKNETEEANMLN----ASTFPDPYKLEVSSSTEPCVSVT------RSDVPS 754
             +PS E V  + ET     +N     +T  +     VS     C ++        S V S
Sbjct: 816  PEPSSESVLKEIETNVLTDMNEEGECTTCSEDL---VSQGETSCYAIVNHEETMESSVKS 872

Query: 753  S------PVHGSGVNESNGKQRRSALLSNKERLLLRKQALKMKKRPVLAVGRSNIVSGVA 592
            S      PV       SN    R+A LSN+ERLLLRKQAL+MKKRPV+AVGRSNIV+GVA
Sbjct: 873  SKNEFKPPVQRPVDTRSNEMPFRAAPLSNRERLLLRKQALRMKKRPVIAVGRSNIVTGVA 932

Query: 591  KTIKTHFQKHPLAIVNIKGRARGTSVQEVVSKLEEATGAILVSQEPSKVILYRGWGA 421
            KTIK HFQKHPLAIVN+KGRA+GTSVQEV+ KLE+ATGA+LVSQEPSKVILYRGWGA
Sbjct: 933  KTIKAHFQKHPLAIVNVKGRAKGTSVQEVIFKLEQATGAVLVSQEPSKVILYRGWGA 989


>ref|XP_002275511.1| PREDICTED: CRM-domain containing factor CFM2, chloroplastic isoform
            X1 [Vitis vinifera]
 ref|XP_010660972.1| PREDICTED: CRM-domain containing factor CFM2, chloroplastic isoform
            X1 [Vitis vinifera]
          Length = 1044

 Score =  863 bits (2231), Expect = 0.0
 Identities = 482/837 (57%), Positives = 582/837 (69%), Gaps = 27/837 (3%)
 Frame = -1

Query: 2850 RRLRGVGIGIKTRLKIGKAGITEGIVHGIHERWRRNELVKIVCEDMCRLNMKRTHDLLEI 2671
            RRL+G+GI I+ +LK+GKAGITEGIV+GIHERWRR E+VKI CED+C+LNMKRTHD+LE 
Sbjct: 192  RRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNMKRTHDILER 251

Query: 2670 KTGGLVVWRAGSIIILYRGADYKYPYFFVNNNKPNDAXXXXXXXXXXXXXXXDVQESYSI 2491
            KTGGLV+WR+GS IILYRGA+YKYPYF  +NN PND+               D +E  S 
Sbjct: 252  KTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQMNNEEHDGKEVCSS 311

Query: 2490 GTDDVGSDGQ---TKMTQTPLIKGVGSRTRVRFQLPGEAQLAEEADQLLHGLGPRFTDWY 2320
            G  DV S G     K+    LI+GVG  TRVRFQLPGEAQL EEAD+LL GLGPRFTDW+
Sbjct: 312  GKGDVKSAGPMPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADRLLDGLGPRFTDWW 371

Query: 2319 GYDPLPVDADLLPAVVPGYRKPFRLLPFGVQSTLTNDEMTTLRRLGRPLPCHFALGRNRK 2140
            GYDPLP+DADLLPAVVPGYR+PFRLLP+G++  LTNDEMT LRRLGRPLPCHFALGRNRK
Sbjct: 372  GYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGRPLPCHFALGRNRK 431

Query: 2139 HQGLAAAILKLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLLTRDKEYIVLYRGK 1960
             QGLAA+++KLWEKCEIAKIAVKRGVQNTNSE+MAEELK LTGGTLL+RD+E+IV YRGK
Sbjct: 432  LQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKNLTGGTLLSRDREFIVFYRGK 491

Query: 1959 DFLPATVSSAIEQRR----NRGVDVLERKKLSRSSDVQENKSKEIGSSSAAEPSGMRDQK 1792
            DFLP  VSSAIE RR    +RG   ++  +L+ +++  E  + E  S    +  G  DQK
Sbjct: 492  DFLPPAVSSAIEARRKYGIHRGKQKIDHHRLAINAEESELGTSEHASDKDCD--GTDDQK 549

Query: 1791 LELAIEQRKKKSREAAIKKTTSKLSQAXXXXXXXXXXXXXXXXXXXXXXXEVDKEGITEE 1612
                 ++R  +S EA +++T  KLS A                       E+DKEGITEE
Sbjct: 550  TNSLSKRRMLRSAEAVVERTNIKLSMALEKKERAEKLLAELEEAQIPQQPEIDKEGITEE 609

Query: 1611 ERYMLRKVGLKMRPFLLLGRRGVFDGTVENMHLHWKYRELVKILSGETNIDELHAAARTL 1432
            ERYMLRKVGL+M+PFLLLGRRG+FDGTVENMHLHWKYRELVKI+S   +I+++H  ARTL
Sbjct: 610  ERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSIEDIHGVARTL 669

Query: 1431 EAESGGILVAVERVRRGHAIIVYRGKNYKRPATLRPQTLLNKREALHRSIEAQRRESLKL 1252
            EAESGGILVAVERV +G+AII+YRGKNYKRPA+LRPQTLLNKREAL RS+EAQRRESLKL
Sbjct: 670  EAESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLLNKREALKRSLEAQRRESLKL 729

Query: 1251 QVLKLGKNVEELKLKLAKSEDIISNAEKDQNIRLEMKSLSAEYGRPDVDLEGYESNSSDQ 1072
             VL+L +N++ELK +L                                 ++  E+NS   
Sbjct: 730  HVLRLTRNIDELKHQLVSR------------------------------IKDKETNSKQL 759

Query: 1071 DDVQE----REFDGGELVFSNENDSLKASEESLETDNENLPKVSPTEQVEKDEFEFTEDN 904
             D       RE  G +++  + +D + +S +SL+T + N  ++      + D     E N
Sbjct: 760  VDKSRLHLARERYGADVILIHSSDGMDSSRDSLQT-SHNDKRIDFPSMCDSDT---DEAN 815

Query: 903  LKPSIELVKGKNETEEANMLN----ASTFPDPYKLEVSSSTEPCVSVT------RSDVPS 754
             +PS E V  + ET     +N     +T  +     VS     C ++        S V S
Sbjct: 816  PEPSSESVLKEIETNVLTDMNEEGECTTCSEDL---VSQGETSCYAIVNHEETMESSVKS 872

Query: 753  S------PVHGSGVNESNGKQRRSALLSNKERLLLRKQALKMKKRPVLAVGRSNIVSGVA 592
            S      PV       SN    R+A LSN+ERLLLRKQAL+MKKRPV+AVGRSNIV+GVA
Sbjct: 873  SKNEFKPPVQRPVDTRSNEMPFRAAPLSNRERLLLRKQALRMKKRPVIAVGRSNIVTGVA 932

Query: 591  KTIKTHFQKHPLAIVNIKGRARGTSVQEVVSKLEEATGAILVSQEPSKVILYRGWGA 421
            KTIK HFQKHPLAIVN+KGRA+GTSVQEV+ KLE+ATGA+LVSQEPSKVILYRGWGA
Sbjct: 933  KTIKAHFQKHPLAIVNVKGRAKGTSVQEVIFKLEQATGAVLVSQEPSKVILYRGWGA 989


>ref|XP_010660973.1| PREDICTED: CRM-domain containing factor CFM2, chloroplastic isoform
            X2 [Vitis vinifera]
          Length = 1044

 Score =  863 bits (2229), Expect = 0.0
 Identities = 482/837 (57%), Positives = 582/837 (69%), Gaps = 27/837 (3%)
 Frame = -1

Query: 2850 RRLRGVGIGIKTRLKIGKAGITEGIVHGIHERWRRNELVKIVCEDMCRLNMKRTHDLLEI 2671
            RRL+G+GI I+ +LK+GKAGITEGIV+GIHERWRR E+VKI CED+C+LNMKRTHD+LE 
Sbjct: 192  RRLKGIGIQIRKKLKVGKAGITEGIVNGIHERWRRAEVVKIRCEDICKLNMKRTHDILER 251

Query: 2670 KTGGLVVWRAGSIIILYRGADYKYPYFFVNNNKPNDAXXXXXXXXXXXXXXXDVQESYSI 2491
            KTGGLV+WR+GS IILYRGA+YKYPYF  +NN PND+               D +E  S 
Sbjct: 252  KTGGLVIWRSGSYIILYRGANYKYPYFLSDNNLPNDSSHDASSDSQMNNEEHDGKEVCSS 311

Query: 2490 GTDDVGSDGQ---TKMTQTPLIKGVGSRTRVRFQLPGEAQLAEEADQLLHGLGPRFTDWY 2320
            G  DV S G     K+    LI+GVG  TRVRFQLPGEAQL EEAD+LL GLGPRFTDW+
Sbjct: 312  GKGDVKSAGPMPANKIAPLSLIQGVGYPTRVRFQLPGEAQLEEEADRLLDGLGPRFTDWW 371

Query: 2319 GYDPLPVDADLLPAVVPGYRKPFRLLPFGVQSTLTNDEMTTLRRLGRPLPCHFALGRNRK 2140
            GYDPLP+DADLLPAVVPGYR+PFRLLP+G++  LTNDEMT LRRLGRPLPCHFALGRNRK
Sbjct: 372  GYDPLPIDADLLPAVVPGYRRPFRLLPYGLKPKLTNDEMTVLRRLGRPLPCHFALGRNRK 431

Query: 2139 HQGLAAAILKLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLLTRDKEYIVLYRGK 1960
             QGLAA+++KLWEKCEIAKIAVKRGVQNTNSE+MAEELK LTGGTLL+RD+E+IV YRGK
Sbjct: 432  LQGLAASMIKLWEKCEIAKIAVKRGVQNTNSEMMAEELKNLTGGTLLSRDREFIVFYRGK 491

Query: 1959 DFLPATVSSAIEQRR----NRGVDVLERKKLSRSSDVQENKSKEIGSSSAAEPSGMRDQK 1792
            DFLP  VSSAIE RR    +RG   ++  +L+ +++  E  + E  S    +  G  DQK
Sbjct: 492  DFLPPAVSSAIEARRKYGIHRGKQKIDHHRLAINAEESELGTSEHASDKDCD--GTDDQK 549

Query: 1791 LELAIEQRKKKSREAAIKKTTSKLSQAXXXXXXXXXXXXXXXXXXXXXXXEVDKEGITEE 1612
                 ++R  +S EA +++T  KLS A                       E+DKEGITEE
Sbjct: 550  TNSLSKRRMLRSAEAVVERTNIKLSMALEKKERAEKLLAELEEAQIPQQPEIDKEGITEE 609

Query: 1611 ERYMLRKVGLKMRPFLLLGRRGVFDGTVENMHLHWKYRELVKILSGETNIDELHAAARTL 1432
            ERYMLRKVGL+M+PFLLLGRRG+FDGTVENMHLHWKYRELVKI+S   +I+++H  ARTL
Sbjct: 610  ERYMLRKVGLRMKPFLLLGRRGIFDGTVENMHLHWKYRELVKIISNGRSIEDIHGVARTL 669

Query: 1431 EAESGGILVAVERVRRGHAIIVYRGKNYKRPATLRPQTLLNKREALHRSIEAQRRESLKL 1252
            EAESGGILVAVERV +G+AII+YRGKNYKRPA+LRPQTLLNKREAL RS+EAQRRESLKL
Sbjct: 670  EAESGGILVAVERVSKGYAIIMYRGKNYKRPASLRPQTLLNKREALKRSLEAQRRESLKL 729

Query: 1251 QVLKLGKNVEELKLKLAKSEDIISNAEKDQNIRLEMKSLSAEYGRPDVDLEGYESNSSDQ 1072
             VL+L +N++ELK +L                                 ++  E+NS   
Sbjct: 730  HVLRLTRNIDELKHQLFSR------------------------------IKDKETNSKQL 759

Query: 1071 DDVQE----REFDGGELVFSNENDSLKASEESLETDNENLPKVSPTEQVEKDEFEFTEDN 904
             D       RE  G +++  + +D + +S +SL+T + N  ++      + D     E N
Sbjct: 760  VDKSRLHLARERYGADVILIHSSDGMDSSRDSLQT-SHNDKRIDFPSMCDSDT---DEAN 815

Query: 903  LKPSIELVKGKNETEEANMLN----ASTFPDPYKLEVSSSTEPCVSVT------RSDVPS 754
             +PS E V  + ET     +N     +T  +     VS     C ++        S V S
Sbjct: 816  PEPSSESVLKEIETNVLTDMNEEGECTTCSEDL---VSQGETSCYAIVNHEETMESSVKS 872

Query: 753  S------PVHGSGVNESNGKQRRSALLSNKERLLLRKQALKMKKRPVLAVGRSNIVSGVA 592
            S      PV       SN    R+A LSN+ERLLLRKQAL+MKKRPV+AVGRSNIV+GVA
Sbjct: 873  SKNEFKPPVQRPVDTRSNEMPFRAAPLSNRERLLLRKQALRMKKRPVIAVGRSNIVTGVA 932

Query: 591  KTIKTHFQKHPLAIVNIKGRARGTSVQEVVSKLEEATGAILVSQEPSKVILYRGWGA 421
            KTIK HFQKHPLAIVN+KGRA+GTSVQEV+ KLE+ATGA+LVSQEPSKVILYRGWGA
Sbjct: 933  KTIKAHFQKHPLAIVNVKGRAKGTSVQEVIFKLEQATGAVLVSQEPSKVILYRGWGA 989


>ref|XP_011047274.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Populus euphratica]
          Length = 1026

 Score =  858 bits (2218), Expect = 0.0
 Identities = 472/823 (57%), Positives = 573/823 (69%), Gaps = 13/823 (1%)
 Frame = -1

Query: 2850 RRLRGVGIGIKTRLKIGKAGITEGIVHGIHERWRRNELVKIVCEDMCRLNMKRTHDLLEI 2671
            RRLR +GI  K +LK+GKAGITEGIV+GIHERWRR+E+VKIVCED+CR+NMKRTHDLLE 
Sbjct: 164  RRLRTIGIAEKRKLKVGKAGITEGIVNGIHERWRRSEVVKIVCEDLCRMNMKRTHDLLER 223

Query: 2670 KTGGLVVWRAGSIIILYRGADYKYPYFFVNNNKPNDAXXXXXXXXXXXXXXXDVQESYSI 2491
            KTGGLVVWR GS I+LYRGADYKYPYF    +  N+                D + S   
Sbjct: 224  KTGGLVVWRVGSKIVLYRGADYKYPYFLAETSSVNETSSDAVQNIDVDDKEDDEEGSVLS 283

Query: 2490 GTDDVGSD---GQTKMTQTPLIKGVGSRTRVRFQLPGEAQLAEEADQLLHGLGPRFTDWY 2320
              D           ++ +  L++GVGS  RVRFQLPGEAQL EEAD LL GLGPRF DW+
Sbjct: 284  AVDGAAPPEPRSSDEIVRPSLVQGVGSPNRVRFQLPGEAQLTEEADHLLDGLGPRFNDWW 343

Query: 2319 GYDPLPVDADLLPAVVPGYRKPFRLLPFGVQSTLTNDEMTTLRRLGRPLPCHFALGRNRK 2140
            GYDPLPVDADLLPAVV GYR+PFRLLP+GV  TLTNDEMTTL+RL RPLPCHFALGRN K
Sbjct: 344  GYDPLPVDADLLPAVVSGYRRPFRLLPYGVSPTLTNDEMTTLKRLSRPLPCHFALGRNTK 403

Query: 2139 HQGLAAAILKLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLLTRDKEYIVLYRGK 1960
            HQGLAA+I+KLWEKCEIAKIAVKRGVQNTNSELMA+ELKWLTGGTLL+RD+E+IVLYRGK
Sbjct: 404  HQGLAASIVKLWEKCEIAKIAVKRGVQNTNSELMAQELKWLTGGTLLSRDREFIVLYRGK 463

Query: 1959 DFLPATVSSAIEQRRNRGVDVLER-----KKLSRSSDVQENKSKEIGSSSAAEPSGMRDQ 1795
            DFLP+ VSSAIE RR RG D+ +R          S ++++   +   + S  E  G  D+
Sbjct: 464  DFLPSAVSSAIEDRRKRG-DMDKRWTDCITSNETSEELKDRSWRTTNAKSTDEIDGTNDR 522

Query: 1794 KLELAIEQRKKKSREAAIKKTTSKLSQAXXXXXXXXXXXXXXXXXXXXXXXEVDKEGITE 1615
            K +L+ E +  +S +AAIK+T+ KLS A                       E+DKEGITE
Sbjct: 523  KHDLS-ENKNLRSTDAAIKRTSIKLSMALEKKAKAEKLLSELEKSEMSQQPEIDKEGITE 581

Query: 1614 EERYMLRKVGLKMRPFLLLGRRGVFDGTVENMHLHWKYRELVKILSGETNIDELHAAART 1435
            EERYMLRK+GLKM+PFLL+GRRGVFDGT+ENMHLHWKYRELVKI+  E +   + A ART
Sbjct: 582  EERYMLRKIGLKMKPFLLMGRRGVFDGTIENMHLHWKYRELVKIICKEKSFQAVQAVART 641

Query: 1434 LEAESGGILVAVERVRRGHAIIVYRGKNYKRPATLRPQTLLNKREALHRSIEAQRRESLK 1255
            LEAESGGILVAVE V +G+AII+YRGKNY RPA LRP TLL+KR+A+ RS+EAQRRESLK
Sbjct: 642  LEAESGGILVAVEGVSKGYAIILYRGKNYTRPACLRPPTLLSKRQAMKRSLEAQRRESLK 701

Query: 1254 LQVLKLGKNVEELKLKLAKSEDIISNAEKDQNIRLEMKSLSAEYGRPDVDLE----GYES 1087
            L VL+L  N++ LKL+L K ++   N +     + ++K  S E  R D +L+     Y +
Sbjct: 702  LHVLRLTSNIDHLKLQLVKDKEAY-NVQCFDESKFQVKGESEEPARTDSELKPDCHSYST 760

Query: 1086 NSSDQDDVQE-REFDGGELVFSNENDSLKASEESLETDNENLPKVSPTEQVEKDEFEFTE 910
              +D + + E R+  G +    N+NDSL AS    +   +   + + T++    +   T 
Sbjct: 761  IPADCNVIIETRDEHGADSTTVNQNDSLGASANHKQL--QPAQRSNWTDRYPTFDGNRTG 818

Query: 909  DNLKPSIELVKGKNETEEANMLNASTFPDPYKLEVSSSTEPCVSVTRSDVPSSPVHGSGV 730
            +N   S+     +      N  N  +F +    E+ SS +   + +   VP        V
Sbjct: 819  ENEPNSLPEFSNEKNVSHLNAKNCVSFNE----EMGSSVKSAENQSGESVPIV------V 868

Query: 729  NESNGKQRRSALLSNKERLLLRKQALKMKKRPVLAVGRSNIVSGVAKTIKTHFQKHPLAI 550
             E N K      LSN++RLLLRKQALKMK RPVLAVGRSNIV+GVAKTIK HFQ+HP AI
Sbjct: 869  EEDNRKPSSVVCLSNRDRLLLRKQALKMKNRPVLAVGRSNIVTGVAKTIKAHFQRHPFAI 928

Query: 549  VNIKGRARGTSVQEVVSKLEEATGAILVSQEPSKVILYRGWGA 421
            VN+KGRA+GTSVQEVVSKLEEATGA+LVSQEPSKVILYRGWGA
Sbjct: 929  VNVKGRAKGTSVQEVVSKLEEATGAVLVSQEPSKVILYRGWGA 971


>ref|XP_023908423.1| CRM-domain containing factor CFM2, chloroplastic isoform X3 [Quercus
            suber]
          Length = 1037

 Score =  855 bits (2208), Expect = 0.0
 Identities = 481/832 (57%), Positives = 583/832 (70%), Gaps = 23/832 (2%)
 Frame = -1

Query: 2850 RRLRGVGIGIKTRLKIGKAGITEGIVHGIHERWRRNELVKIVCEDMCRLNMKRTHDLLEI 2671
            RRLR +GI  + +LK+GKAGITEGIV+GIHERWRR E+VKI CED+CR+NMKRTH+LLE 
Sbjct: 169  RRLRRLGIETRKKLKVGKAGITEGIVNGIHERWRRFEVVKIECEDLCRMNMKRTHELLER 228

Query: 2670 KTGGLVVWRAGSIIILYRGADYKYPYFFVNNNKPNDAXXXXXXXXXXXXXXXDVQESYS- 2494
            KTGGLVVWR+GS IILYRGA+YKYPYF  +    +D+               +  ES S 
Sbjct: 229  KTGGLVVWRSGSKIILYRGANYKYPYFLSDKILTSDSMIDDILDPHIDDGEQNKTESCSS 288

Query: 2493 --IGTDDVGSDGQTKMTQTPLIKGVGSRTRVRFQLPGEAQLAEEADQLLHGLGPRFTDWY 2320
              IG     +    +++Q  LI+GVG   RVRFQLPGEA+LAEEAD+LL GLGPRFTDW+
Sbjct: 289  SIIGVKAAATSPSKEISQPKLIQGVGMPNRVRFQLPGEAELAEEADRLLEGLGPRFTDWW 348

Query: 2319 GYDPLPVDADLLPAVVPGYRKPFRLLPFGVQSTLTNDEMTTLRRLGRPLPCHFALGRNRK 2140
            GYDPLPVDADLLPA+VPGYRKPFRLLP+GV+S LTNDEMTTL+RLGRPLPCHFALGRNR 
Sbjct: 349  GYDPLPVDADLLPAIVPGYRKPFRLLPYGVKSVLTNDEMTTLKRLGRPLPCHFALGRNRN 408

Query: 2139 HQGLAAAILKLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLLTRDKEYIVLYRGK 1960
             QGLAA+I+KLWEKCEIAKIAVKRGVQNTNSE+MAEELK LTGG LL+RD E+  LYRGK
Sbjct: 409  LQGLAASIVKLWEKCEIAKIAVKRGVQNTNSEMMAEELKRLTGGILLSRDSEFFALYRGK 468

Query: 1959 DFLPATVSSAIEQRRNRGV-DVLERKKLSRS-SDVQENKSKEIGSSSAAEPSGMRDQKLE 1786
            DFLP   SSAIE+RR  G+    ER + S S + VQE K      SS +EP G    +  
Sbjct: 469  DFLPPAASSAIEERRKYGIHGEEERTRCSTSVTTVQEPKLDTAECSSESEPDGGNSVERG 528

Query: 1785 LAIEQRKKKSREAAIKKTTSKLSQAXXXXXXXXXXXXXXXXXXXXXXXEVDKEGITEEER 1606
            L  EQRK +S EAAIK+T+ KLS A                       E+DKEGITEEER
Sbjct: 529  LLFEQRKLRSTEAAIKRTSIKLSMAIEKKAMAEKLLAELEKEEIPQQSEIDKEGITEEER 588

Query: 1605 YMLRKVGLKMRPFLLLGRRGVFDGTVENMHLHWKYRELVKILSGETNIDELHAAARTLEA 1426
            YMLRKV L+M+PFLL+GRRGVFDGTVENMHLHWKYRELVKI+S   +I+ +H  ARTLEA
Sbjct: 589  YMLRKVALRMKPFLLMGRRGVFDGTVENMHLHWKYRELVKIISKTRSIEAVHKEARTLEA 648

Query: 1425 ESGGILVAVERVRRGHAIIVYRGKNYKRPATLRPQTLLNKREALHRSIEAQRRESLKLQV 1246
            ESGGILVAVERV +G+AIIVYRGKNY RPA+LRPQTLLNKREAL RSIEAQRR+SLKL V
Sbjct: 649  ESGGILVAVERVSKGYAIIVYRGKNYTRPASLRPQTLLNKREALKRSIEAQRRKSLKLHV 708

Query: 1245 LKLGKNVEELKLKLAKSEDIISNAEKDQ-NIRLEMKSLSAEYGRPDVDL-EGYESNSSDQ 1072
            L L KN+++LKL+L K ++  +    D  N +L  + L ++       L         ++
Sbjct: 709  LSLTKNIDDLKLQLDKDKEANNVLPADALNYKLATECLRSQVEHNSSPLSHSVIPACHEE 768

Query: 1071 DDVQEREFDGGELVFSNENDSLKASEESLE-TDNENLPKVSPTEQVEKDEFEFTED--NL 901
            ++++  +  G +L  +N ND + AS  + + T  + +  +S T       F F+ +  + 
Sbjct: 769  NNLEAEDKHGAQLTLTNLNDGMDASIYNTQATQQDKVLGLSST-------FRFSSELVSK 821

Query: 900  KPSIELVKGKNETEEANMLNASTFPDPYKLEVSSST-------------EPCVSVTRSDV 760
            +P  +L K  N   E  +  ++  PD +  E + S+             EP  S  + D+
Sbjct: 822  EPHAKLCKDMNGEVETAV--STPCPDNFMSEETGSSAVVQHCVYDNNAIEPAKS-AKIDL 878

Query: 759  PSSPVHGSGVNESNGKQRRSALLSNKERLLLRKQALKMKKRPVLAVGRSNIVSGVAKTIK 580
               P+    V   +    R+ LLSNK+RLLLRKQALKMK RPVLAVGR+NIVSGVAK I 
Sbjct: 879  KPVPI---AVENGSEMPHRAVLLSNKDRLLLRKQALKMKTRPVLAVGRNNIVSGVAKAIM 935

Query: 579  THFQKHPLAIVNIKGRARGTSVQEVVSKLEEATGAILVSQEPSKVILYRGWG 424
             HF+KHPLAIVN+KGRA+GTSVQEVV KLE+ATGA+LVSQEPSKVILYRGWG
Sbjct: 936  VHFKKHPLAIVNVKGRAKGTSVQEVVFKLEQATGAVLVSQEPSKVILYRGWG 987


>ref|XP_023908420.1| CRM-domain containing factor CFM2, chloroplastic isoform X1 [Quercus
            suber]
 ref|XP_023908421.1| CRM-domain containing factor CFM2, chloroplastic isoform X1 [Quercus
            suber]
          Length = 1046

 Score =  855 bits (2208), Expect = 0.0
 Identities = 483/841 (57%), Positives = 591/841 (70%), Gaps = 32/841 (3%)
 Frame = -1

Query: 2850 RRLRGVGIGIKTRLKIGKAGITEGIVHGIHERWRRNELVKIVCEDMCRLNMKRTHDLLEI 2671
            RRLR +GI  + +LK+GKAGITEGIV+GIHERWRR E+VKI CED+CR+NMKRTH+LLE 
Sbjct: 169  RRLRRLGIETRKKLKVGKAGITEGIVNGIHERWRRFEVVKIECEDLCRMNMKRTHELLER 228

Query: 2670 KTGGLVVWRAGSIIILYRGADYKYPYFFVNNNKPNDAXXXXXXXXXXXXXXXDVQESYS- 2494
            KTGGLVVWR+GS IILYRGA+YKYPYF  +    +D+               +  ES S 
Sbjct: 229  KTGGLVVWRSGSKIILYRGANYKYPYFLSDKILTSDSMIDDILDPHIDDGEQNKTESCSS 288

Query: 2493 --IGTDDVGSDGQTKMTQTPLIKGVGSRTRVRFQLPGEAQLAEEADQLLHGLGPRFTDWY 2320
              IG     +    +++Q  LI+GVG   RVRFQLPGEA+LAEEAD+LL GLGPRFTDW+
Sbjct: 289  SIIGVKAAATSPSKEISQPKLIQGVGMPNRVRFQLPGEAELAEEADRLLEGLGPRFTDWW 348

Query: 2319 GYDPLPVDADLLPAVVPGYRKPFRLLPFGVQSTLTNDEMTTLRRLGRPLPCHFALGRNRK 2140
            GYDPLPVDADLLPA+VPGYRKPFRLLP+GV+S LTNDEMTTL+RLGRPLPCHFALGRNR 
Sbjct: 349  GYDPLPVDADLLPAIVPGYRKPFRLLPYGVKSVLTNDEMTTLKRLGRPLPCHFALGRNRN 408

Query: 2139 HQGLAAAILKLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLLTRDKEYIVLYRGK 1960
             QGLAA+I+KLWEKCEIAKIAVKRGVQNTNSE+MAEELK LTGG LL+RD E+  LYRGK
Sbjct: 409  LQGLAASIVKLWEKCEIAKIAVKRGVQNTNSEMMAEELKRLTGGILLSRDSEFFALYRGK 468

Query: 1959 DFLPATVSSAIEQRRNRGV-DVLERKKLSRS-SDVQENKSKEIGSSSAAEPSGMRDQKLE 1786
            DFLP   SSAIE+RR  G+    ER + S S + VQE K      SS +EP G    +  
Sbjct: 469  DFLPPAASSAIEERRKYGIHGEEERTRCSTSVTTVQEPKLDTAECSSESEPDGGNSVERG 528

Query: 1785 LAIEQRKKKSREAAIKKTTSKLSQAXXXXXXXXXXXXXXXXXXXXXXXEVDKEGITEEER 1606
            L  EQRK +S EAAIK+T+ KLS A                       E+DKEGITEEER
Sbjct: 529  LLFEQRKLRSTEAAIKRTSIKLSMAIEKKAMAEKLLAELEKEEIPQQSEIDKEGITEEER 588

Query: 1605 YMLRKVGLKMRPFLLLGRRGVFDGTVENMHLHWKYRELVKILSGETNIDELHAAARTLEA 1426
            YMLRKV L+M+PFLL+GRRGVFDGTVENMHLHWKYRELVKI+S   +I+ +H  ARTLEA
Sbjct: 589  YMLRKVALRMKPFLLMGRRGVFDGTVENMHLHWKYRELVKIISKTRSIEAVHKEARTLEA 648

Query: 1425 ESGGILVAVERVRRGHAIIVYRGKNYKRPATLRPQTLLNKREALHRSIEAQRRESLKLQV 1246
            ESGGILVAVERV +G+AIIVYRGKNY RPA+LRPQTLLNKREAL RSIEAQRR+SLKL V
Sbjct: 649  ESGGILVAVERVSKGYAIIVYRGKNYTRPASLRPQTLLNKREALKRSIEAQRRKSLKLHV 708

Query: 1245 LKLGKNVEELKLKLAKSED----IISNAEKDQNIRLEMKSLSA-EYGRPDVDLEGYESNS 1081
            L L KN+++LKL+L K ++    + ++A   + ++ +M ++ A E  R  V+      + 
Sbjct: 709  LSLTKNIDDLKLQLDKDKEANNVLPADALNYKLVKEDMNNMQATECLRSQVEHNSSPLSH 768

Query: 1080 S------DQDDVQEREFDGGELVFSNENDSLKASEESLE-TDNENLPKVSPTEQVEKDEF 922
            S      ++++++  +  G +L  +N ND + AS  + + T  + +  +S T       F
Sbjct: 769  SVIPACHEENNLEAEDKHGAQLTLTNLNDGMDASIYNTQATQQDKVLGLSST-------F 821

Query: 921  EFTED--NLKPSIELVKGKNETEEANMLNASTFPDPYKLEVSSST-------------EP 787
             F+ +  + +P  +L K  N   E  +  ++  PD +  E + S+             EP
Sbjct: 822  RFSSELVSKEPHAKLCKDMNGEVETAV--STPCPDNFMSEETGSSAVVQHCVYDNNAIEP 879

Query: 786  CVSVTRSDVPSSPVHGSGVNESNGKQRRSALLSNKERLLLRKQALKMKKRPVLAVGRSNI 607
              S  + D+   P+    V   +    R+ LLSNK+RLLLRKQALKMK RPVLAVGR+NI
Sbjct: 880  AKS-AKIDLKPVPI---AVENGSEMPHRAVLLSNKDRLLLRKQALKMKTRPVLAVGRNNI 935

Query: 606  VSGVAKTIKTHFQKHPLAIVNIKGRARGTSVQEVVSKLEEATGAILVSQEPSKVILYRGW 427
            VSGVAK I  HF+KHPLAIVN+KGRA+GTSVQEVV KLE+ATGA+LVSQEPSKVILYRGW
Sbjct: 936  VSGVAKAIMVHFKKHPLAIVNVKGRAKGTSVQEVVFKLEQATGAVLVSQEPSKVILYRGW 995

Query: 426  G 424
            G
Sbjct: 996  G 996


>ref|XP_023908422.1| CRM-domain containing factor CFM2, chloroplastic isoform X2 [Quercus
            suber]
          Length = 1046

 Score =  855 bits (2208), Expect = 0.0
 Identities = 483/841 (57%), Positives = 591/841 (70%), Gaps = 32/841 (3%)
 Frame = -1

Query: 2850 RRLRGVGIGIKTRLKIGKAGITEGIVHGIHERWRRNELVKIVCEDMCRLNMKRTHDLLEI 2671
            RRLR +GI  + +LK+GKAGITEGIV+GIHERWRR E+VKI CED+CR+NMKRTH+LLE 
Sbjct: 169  RRLRRLGIETRKKLKVGKAGITEGIVNGIHERWRRFEVVKIECEDLCRMNMKRTHELLER 228

Query: 2670 KTGGLVVWRAGSIIILYRGADYKYPYFFVNNNKPNDAXXXXXXXXXXXXXXXDVQESYS- 2494
            KTGGLVVWR+GS IILYRGA+YKYPYF  +    +D+               +  ES S 
Sbjct: 229  KTGGLVVWRSGSKIILYRGANYKYPYFLSDKILTSDSMIDDILDPHIDDGEQNKTESCSS 288

Query: 2493 --IGTDDVGSDGQTKMTQTPLIKGVGSRTRVRFQLPGEAQLAEEADQLLHGLGPRFTDWY 2320
              IG     +    +++Q  LI+GVG   RVRFQLPGEA+LAEEAD+LL GLGPRFTDW+
Sbjct: 289  SIIGVKAAATSPSKEISQPKLIQGVGMPNRVRFQLPGEAELAEEADRLLEGLGPRFTDWW 348

Query: 2319 GYDPLPVDADLLPAVVPGYRKPFRLLPFGVQSTLTNDEMTTLRRLGRPLPCHFALGRNRK 2140
            GYDPLPVDADLLPA+VPGYRKPFRLLP+GV+S LTNDEMTTL+RLGRPLPCHFALGRNR 
Sbjct: 349  GYDPLPVDADLLPAIVPGYRKPFRLLPYGVKSVLTNDEMTTLKRLGRPLPCHFALGRNRN 408

Query: 2139 HQGLAAAILKLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLLTRDKEYIVLYRGK 1960
             QGLAA+I+KLWEKCEIAKIAVKRGVQNTNSE+MAEELK LTGG LL+RD E+  LYRGK
Sbjct: 409  LQGLAASIVKLWEKCEIAKIAVKRGVQNTNSEMMAEELKRLTGGILLSRDSEFFALYRGK 468

Query: 1959 DFLPATVSSAIEQRRNRGV-DVLERKKLSRS-SDVQENKSKEIGSSSAAEPSGMRDQKLE 1786
            DFLP   SSAIE+RR  G+    ER + S S + VQE K      SS +EP G    +  
Sbjct: 469  DFLPPAASSAIEERRKYGIHGEEERTRCSTSVTTVQEPKLDTAECSSESEPDGGNSVERG 528

Query: 1785 LAIEQRKKKSREAAIKKTTSKLSQAXXXXXXXXXXXXXXXXXXXXXXXEVDKEGITEEER 1606
            L  EQRK +S EAAIK+T+ KLS A                       E+DKEGITEEER
Sbjct: 529  LLFEQRKLRSTEAAIKRTSIKLSMAIEKKAMAEKLLAELEKEEIPQQSEIDKEGITEEER 588

Query: 1605 YMLRKVGLKMRPFLLLGRRGVFDGTVENMHLHWKYRELVKILSGETNIDELHAAARTLEA 1426
            YMLRKV L+M+PFLL+GRRGVFDGTVENMHLHWKYRELVKI+S   +I+ +H  ARTLEA
Sbjct: 589  YMLRKVALRMKPFLLMGRRGVFDGTVENMHLHWKYRELVKIISKTRSIEAVHKEARTLEA 648

Query: 1425 ESGGILVAVERVRRGHAIIVYRGKNYKRPATLRPQTLLNKREALHRSIEAQRRESLKLQV 1246
            ESGGILVAVERV +G+AIIVYRGKNY RPA+LRPQTLLNKREAL RSIEAQRR+SLKL V
Sbjct: 649  ESGGILVAVERVSKGYAIIVYRGKNYTRPASLRPQTLLNKREALKRSIEAQRRKSLKLHV 708

Query: 1245 LKLGKNVEELKLKLAKSED----IISNAEKDQNIRLEMKSLSA-EYGRPDVDLEGYESNS 1081
            L L KN+++LKL+L K ++    + ++A   + ++ +M ++ A E  R  V+      + 
Sbjct: 709  LSLTKNIDDLKLQLDKDKEANNVLPADALNYKLVKEDMNNMQATECLRSQVEHNSSPLSH 768

Query: 1080 S------DQDDVQEREFDGGELVFSNENDSLKASEESLE-TDNENLPKVSPTEQVEKDEF 922
            S      ++++++  +  G +L  +N ND + AS  + + T  + +  +S T       F
Sbjct: 769  SVIPACHEENNLEAEDKHGAQLTLTNLNDGMDASIYNTQATQQDKVLGLSST-------F 821

Query: 921  EFTED--NLKPSIELVKGKNETEEANMLNASTFPDPYKLEVSSST-------------EP 787
             F+ +  + +P  +L K  N   E  +  ++  PD +  E + S+             EP
Sbjct: 822  RFSSELVSKEPHAKLCKDMNGEVETAV--STPCPDNFMSEETGSSAVVQHCVYDNNAIEP 879

Query: 786  CVSVTRSDVPSSPVHGSGVNESNGKQRRSALLSNKERLLLRKQALKMKKRPVLAVGRSNI 607
              S  + D+   P+    V   +    R+ LLSNK+RLLLRKQALKMK RPVLAVGR+NI
Sbjct: 880  AKS-AKIDLKPVPI---AVENGSEMPHRAVLLSNKDRLLLRKQALKMKTRPVLAVGRNNI 935

Query: 606  VSGVAKTIKTHFQKHPLAIVNIKGRARGTSVQEVVSKLEEATGAILVSQEPSKVILYRGW 427
            VSGVAK I  HF+KHPLAIVN+KGRA+GTSVQEVV KLE+ATGA+LVSQEPSKVILYRGW
Sbjct: 936  VSGVAKAIMVHFKKHPLAIVNVKGRAKGTSVQEVVFKLEQATGAVLVSQEPSKVILYRGW 995

Query: 426  G 424
            G
Sbjct: 996  G 996


>ref|XP_009762860.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Nicotiana sylvestris]
          Length = 1051

 Score =  854 bits (2207), Expect = 0.0
 Identities = 475/854 (55%), Positives = 593/854 (69%), Gaps = 30/854 (3%)
 Frame = -1

Query: 2850 RRLRGVGIGIKTRLKIGKAGITEGIVHGIHERWRRNELVKIVCEDMCRLNMKRTHDLLEI 2671
            RRLR +GIG++ +LKIGKAGITEGIV+GIHERWRR ELVKI CED+CRLNMKRTH+LLE 
Sbjct: 183  RRLRTLGIGLRKKLKIGKAGITEGIVNGIHERWRRIELVKITCEDLCRLNMKRTHELLER 242

Query: 2670 KTGGLVVWRAGSIIILYRGADYKYPYFFVNNNKPNDAXXXXXXXXXXXXXXXDVQESYSI 2491
            KTGGLV+WR+GS IILYRGADYKYPYF  ++++ + +                   + S 
Sbjct: 243  KTGGLVIWRSGSNIILYRGADYKYPYFSESSSRQDASPDLFTGTEE--------HTTNSS 294

Query: 2490 GTDDVGSDGQTKMTQTPLIKGVGSRTRVRFQLPGEAQLAEEADQLLHGLGPRFTDWYGYD 2311
              D + SD   + + T +I+GVGS  RVRFQLPGEA+L EEAD+LL GLGPRFTDW+G +
Sbjct: 295  DMDAIKSDASDRKSPTRVIQGVGSPDRVRFQLPGEAELTEEADKLLEGLGPRFTDWWGCE 354

Query: 2310 PLPVDADLLPAVVPGYRKPFRLLPFGVQSTLTNDEMTTLRRLGRPLPCHFALGRNRKHQG 2131
            PLP+DADLLPAVVPGY+KPFRLLP+GV+  LTNDEMTTL+RLGRPLPCHFALGRNRK QG
Sbjct: 355  PLPIDADLLPAVVPGYKKPFRLLPYGVKPKLTNDEMTTLKRLGRPLPCHFALGRNRKLQG 414

Query: 2130 LAAAILKLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLLTRDKEYIVLYRGKDFL 1951
            LAAAI+KLWEKCEIAK+AVKRGVQNTNSELMAEELKWLTGGTLL+RDKE+IV YRGKDFL
Sbjct: 415  LAAAIVKLWEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLSRDKEFIVFYRGKDFL 474

Query: 1950 PATVSSAIEQRRNRGVDVLERKKLSRSSDV---QENKSKEIGSSSAAEPSGMRDQKLELA 1780
            P+ VSSAI +RR + V+  E KK S SS V   +E K   + S S  E +   DQK    
Sbjct: 475  PSAVSSAIAERRKQVVE--EEKKSSFSSSVANTKEQKKSTVRSVSDDEHANQNDQK---G 529

Query: 1779 IEQRKK-KSREAAIKKTTSKLSQAXXXXXXXXXXXXXXXXXXXXXXXEVDKEGITEEERY 1603
            ++++KK  S EAAIK+T  KL+ A                       ++DKEGITEEER+
Sbjct: 530  VQEKKKLTSMEAAIKRTADKLATAIEKKAKAEQLLVELEEDEMPQQPDLDKEGITEEERF 589

Query: 1602 MLRKVGLKMRPFLLLGRRGVFDGTVENMHLHWKYRELVKILSGETNIDELHAAARTLEAE 1423
            MLRK+GL+M+PFLLLGRRGVFDGTVENMHLHWKYRELVK+++G  +I+E++  AR LEAE
Sbjct: 590  MLRKIGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVIAGRKSIEEVNQIARMLEAE 649

Query: 1422 SGGILVAVERVRRGHAIIVYRGKNYKRPATLRPQTLLNKREALHRSIEAQRRESLKLQVL 1243
            SGGILVAVERV +G+AIIVYRGKNY+RPA+LRPQTLL+KREA+ RSIEAQRR+SLKL VL
Sbjct: 650  SGGILVAVERVNKGYAIIVYRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVL 709

Query: 1242 KLGKNVEELKLKLAKSEDIISNAEKDQNIRLEMKSLSAEYGRPDVDLEGYESNSSDQDDV 1063
            KL +N+E LK +L KSE++I     D  + L++            +     ++    +D 
Sbjct: 710  KLTQNIEALKSRLTKSEEMIHMQSPDM-VGLQVTETGTSNAARGTNYHSSLASPCTSEDC 768

Query: 1062 QEREFDGGELVFSNENDSLKASEESLETDNENLPKVSPTEQVEKDEFEFTEDNLKPSIEL 883
             +   D      S++ + L  S E+  +  + LP  S  +   +   E   D ++P  + 
Sbjct: 769  GDVAKDADH---SSQKELLSDSSETDHSSQQELPSDSSFKY--ESNAEAMTDTIQPQRQS 823

Query: 882  VKGKNETEEANMLNASTFPDPYKLEVSSSTEPC--------VSVTRS------------- 766
            +    E++  +M N +   + +   VS S             S TRS             
Sbjct: 824  ISSTKESK--SMFNVNVDEEAFGSAVSESVSKSSRGEDKIHFSETRSVNKLREVDNRKEV 881

Query: 765  ----DVPSSPVHGSGVNESNGKQRRSALLSNKERLLLRKQALKMKKRPVLAVGRSNIVSG 598
                 V +     S  + S G   +   LSN+ERLLLRKQALKMK++PVLAVGRSNIV+G
Sbjct: 882  SEVDSVKAQQELRSTRSRSEGMPPKKVHLSNRERLLLRKQALKMKQQPVLAVGRSNIVTG 941

Query: 597  VAKTIKTHFQKHPLAIVNIKGRARGTSVQEVVSKLEEATGAILVSQEPSKVILYRGWGAS 418
            VAK IK HF+K+PLAIVN+KGRA+GTSV+EVV KLE+ATGA+LVSQEPSKVILYRGWG  
Sbjct: 942  VAKAIKAHFKKYPLAIVNVKGRAKGTSVREVVFKLEQATGAVLVSQEPSKVILYRGWGPE 1001

Query: 417  TTQD-SNQSGVKQN 379
              +  SN++G++ +
Sbjct: 1002 GQRGASNRNGIRDS 1015


>ref|XP_021299250.1| CRM-domain containing factor CFM2, chloroplastic [Herrania umbratica]
 ref|XP_021299251.1| CRM-domain containing factor CFM2, chloroplastic [Herrania umbratica]
          Length = 1045

 Score =  854 bits (2206), Expect = 0.0
 Identities = 474/843 (56%), Positives = 587/843 (69%), Gaps = 33/843 (3%)
 Frame = -1

Query: 2850 RRLRGVGIGIKTRLKIGKAGITEGIVHGIHERWRRNELVKIVCEDMCRLNMKRTHDLLEI 2671
            RRLR VGIG K +LK+GKAGITEGIV+GIHERWRR+E+VKIVCED+C++NMKRTH++LE 
Sbjct: 172  RRLRTVGIGEKRKLKLGKAGITEGIVNGIHERWRRSEVVKIVCEDICKMNMKRTHEVLER 231

Query: 2670 KTGGLVVWRAGSIIILYRGADYKYPYFFVNNNKPNDAXXXXXXXXXXXXXXXDVQESYSI 2491
            KTGGLVVWR+GS IILYRGA+Y+YPYF  +    +D                   ES S 
Sbjct: 232  KTGGLVVWRSGSKIILYRGANYRYPYFLADKIATDDTSSNASPDTNMDNVELHETESCSS 291

Query: 2490 GTDDVGS---DGQTKMTQTPLIKGVGSRTRVRFQLPGEAQLAEEADQLLHGLGPRFTDWY 2320
              +   +   +   KMT+  +++GVGS +RVRFQLPGEA+L EEAD+LL GLGPRFTDW+
Sbjct: 292  EINSAKTAIPNATNKMTKPIVVQGVGSPSRVRFQLPGEAELVEEADRLLDGLGPRFTDWW 351

Query: 2319 GYDPLPVDADLLPAVVPGYRKPFRLLPFGVQSTLTNDEMTTLRRLGRPLPCHFALGRNRK 2140
            GY+PLPVD DLLPA++PGYR+PFRLLP+GV+  LTNDEMTTLRRLGRPLPCHF LGRNRK
Sbjct: 352  GYEPLPVDGDLLPAIIPGYRRPFRLLPYGVKPILTNDEMTTLRRLGRPLPCHFVLGRNRK 411

Query: 2139 HQGLAAAILKLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLLTRDKEYIVLYRGK 1960
             QGLAA+I+KLWEKCEI K+A+KRGVQNTNSELMAEELKWLTGGTLL RDK++IVLYRGK
Sbjct: 412  LQGLAASIVKLWEKCEITKVAIKRGVQNTNSELMAEELKWLTGGTLLARDKDFIVLYRGK 471

Query: 1959 DFLPATVSSAIEQRR-------NRGVDVLERKKLSRSSDVQENKSKEIGSSSAAEPSGMR 1801
            DFLP+ VSSAIE+RR        +G +  + KK ++   V++ K     S S ++ +  +
Sbjct: 472  DFLPSAVSSAIEERRRHVIHVEKQGAECSKSKKTAQEVIVEDTK-----SGSESKINSAK 526

Query: 1800 DQKLELAIEQRKKKSREAAIKKTTSKLSQAXXXXXXXXXXXXXXXXXXXXXXXEVDKEGI 1621
            DQ+    ++ +  KS EAAI+KT  KLS A                       E+DKEGI
Sbjct: 527  DQRSNFFVDPKNMKSAEAAIRKTDVKLSMALEKKAKAEKLLAELEQAQIPQQYEIDKEGI 586

Query: 1620 TEEERYMLRKVGLKMRPFLLLGRRGVFDGTVENMHLHWKYRELVKILSGETNIDELHAAA 1441
            T+EERYMLRKVGL+M+PFLLLGRRGVFDGTVENMHLHWKYRELVKI+S ETN++ +H  A
Sbjct: 587  TQEERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIISKETNVEAVHQLA 646

Query: 1440 RTLEAESGGILVAVERVRRGHAIIVYRGKNYKRPATLRPQTLLNKREALHRSIEAQRRES 1261
            R LEAESGGIL+AVERV +G+AIIVYRGKNY+RP  LRPQTLL KR+A+ RS+E QRR+S
Sbjct: 647  RMLEAESGGILMAVERVSKGYAIIVYRGKNYERPTCLRPQTLLTKRQAMKRSLEEQRRKS 706

Query: 1260 LKLQVLKLGKNVEELKLKLAKSEDIISNAEKDQN----IRLEMKSL-SAEYGRPDVDLEG 1096
            LKL +LKL +N++ELK +L   ++  S    +Q+    ++ EM++L S EY    +    
Sbjct: 707  LKLHILKLTRNIDELKHQLVVDKEANSMQTVEQSSLPLVQEEMETLQSVEYTGSVI---- 762

Query: 1095 YESNSSDQDDVQEREFDGGELVFSNENDSLKASEESLETDNENLPKVSPTEQVEKDEFEF 916
             E  +S    V+ R+ DG E   S +ND + A+    +   + L + S       D FE 
Sbjct: 763  -ECPASPGGHVKARDKDGSEST-SMKNDKMVAAIGIRQPSKQELMEPSSIH----DGFEN 816

Query: 915  TEDNLKPSIELVKGKNETEEANMLNA------STFPDPYKLEV-----------SSSTEP 787
             +   + S E V  ++   E   LNA      +++PD    E+           +S   P
Sbjct: 817  HKTESEFSAESVNRQSHATELRALNAQVEMVDTSYPDNLMEEIDYSGAINAKHGASKNGP 876

Query: 786  CVSVTRSDVPSSPVHGSGVNESNGKQRRSA-LLSNKERLLLRKQALKMKKRPVLAVGRSN 610
              S+  S         S V   + K   +A  LSNK+RLLLRKQALKMKKRPVLAVGRSN
Sbjct: 877  MESLVESASMLDVSISSAVENMSNKMGSTANFLSNKDRLLLRKQALKMKKRPVLAVGRSN 936

Query: 609  IVSGVAKTIKTHFQKHPLAIVNIKGRARGTSVQEVVSKLEEATGAILVSQEPSKVILYRG 430
            IV+GVAK IK HF+KHPLAIVN+KGRA+GTSVQEVV KL+EATGA LVSQEPSKVILYRG
Sbjct: 937  IVTGVAKAIKAHFRKHPLAIVNVKGRAKGTSVQEVVLKLQEATGAFLVSQEPSKVILYRG 996

Query: 429  WGA 421
            WGA
Sbjct: 997  WGA 999


>ref|XP_017611529.1| PREDICTED: CRM-domain containing factor CFM2, chloroplastic isoform
            X1 [Gossypium arboreum]
 gb|KHG23499.1| Chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Gossypium arboreum]
          Length = 1027

 Score =  852 bits (2202), Expect = 0.0
 Identities = 471/840 (56%), Positives = 587/840 (69%), Gaps = 16/840 (1%)
 Frame = -1

Query: 2850 RRLRGVGIGIKTRLKIGKAGITEGIVHGIHERWRRNELVKIVCEDMCRLNMKRTHDLLEI 2671
            +RLR VGIG K +LK+GKAGITEGIV+GIHERWR++E+V+IVCED+C++NMKRTH++LE 
Sbjct: 171  KRLRTVGIGEKRKLKVGKAGITEGIVNGIHERWRKSEVVRIVCEDICKMNMKRTHEVLER 230

Query: 2670 KTGGLVVWRAGSIIILYRGADYKYPYFFVNNNKPNDAXXXXXXXXXXXXXXXDVQESYSI 2491
            KTGGLV+WR+GS IILYRGA+YKYPYF  +    +D+               D  ES S 
Sbjct: 231  KTGGLVIWRSGSKIILYRGANYKYPYFSADKIGTHDSSSNASPDTNVANKELDETESCSS 290

Query: 2490 GTDDVGSD---GQTKMTQTPLIKGVGSRTRVRFQLPGEAQLAEEADQLLHGLGPRFTDWY 2320
              + V +       KMT+  LI+GVGS +RVRFQLPGEA+L  EAD+LL GLGPRFTDW+
Sbjct: 291  EFNGVKTSTPKATDKMTKRALIQGVGSPSRVRFQLPGEAELVAEADRLLDGLGPRFTDWW 350

Query: 2319 GYDPLPVDADLLPAVVPGYRKPFRLLPFGVQSTLTNDEMTTLRRLGRPLPCHFALGRNRK 2140
            GY+PLPVD DLLPA++PGYR+PFRLLP+GV+S LTNDEMTTLRRLGRPLPCHFALGRNRK
Sbjct: 351  GYEPLPVDGDLLPAIIPGYRRPFRLLPYGVKSLLTNDEMTTLRRLGRPLPCHFALGRNRK 410

Query: 2139 HQGLAAAILKLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLLTRDKEYIVLYRGK 1960
             QGLAA+I+KLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLL+RDK++IVLYRGK
Sbjct: 411  LQGLAASIIKLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLLSRDKDFIVLYRGK 470

Query: 1959 DFLPATVSSAIEQRRNRGVDVLERKKLSRSSDVQENKSKEIGSSSAAEPSGMRDQKLELA 1780
            DFLP+ VSSAIE+RR   +    +        +QE   +   ++S  + +  +D K ++ 
Sbjct: 471  DFLPSAVSSAIEERRKHVIHAENQS----GKTMQEVNGEGTKTASENDINSAKDHKSDVF 526

Query: 1779 IEQRKKKSREAAIKKTTSKLSQAXXXXXXXXXXXXXXXXXXXXXXXEVDKEGITEEERYM 1600
              ++   S EA IK+T+SKLS A                       E+DKEGIT EERYM
Sbjct: 527  SVRKNLNSTEATIKRTSSKLSMALEKKAKAEKLLAQLEQEVIPQQSEIDKEGITREERYM 586

Query: 1599 LRKVGLKMRPFLLLGRRGVFDGTVENMHLHWKYRELVKILSGETNIDELHAAARTLEAES 1420
            LRKVGL+M+PFLLLGRRGVFDGTVENMHLHWKYRELVKI+S ETN++ +H  A+ LEAES
Sbjct: 587  LRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIISKETNVEAVHQEAQILEAES 646

Query: 1419 GGILVAVERVRRGHAIIVYRGKNYKRPATLRPQTLLNKREALHRSIEAQRRESLKLQVLK 1240
            GGILVAVERV +G+AII YRGKNY+RP  LRPQTLL KREA+ RS+E QR +SLKL +LK
Sbjct: 647  GGILVAVERVSKGYAIIFYRGKNYERPTCLRPQTLLTKREAMKRSLEEQRHKSLKLHILK 706

Query: 1239 LGKNVEELKLKLAKSEDIISNAEKDQ----NIRLEMKSL-SAEYGRPDVDLEGYESNSSD 1075
            L +N++ELK +L   ++  +    DQ    ++  EM++L S ++ R D++         +
Sbjct: 707  LTRNIDELKHQLVVDKEASNKLAADQSRLPSVEEEMETLQSVKFARSDIEYHASPEGHLE 766

Query: 1074 QDDVQEREFDGGELVFSNENDSLKASEESLETDNENLPKVSPTE---QVEKDEFEFTEDN 904
              D  E          S +ND + A+    E   + L + S      +  K E EF+ ++
Sbjct: 767  AKDKPEST--------SMKNDRMIAAVSISEPSEQVLVEPSSIHDGVENHKTESEFSSES 818

Query: 903  LKPSIELVKGKNETEEANMLNASTFPDPYKLEVSSSTEPCVSVTRS-----DVPSSPVHG 739
            +       + +    +  M+++S+  D    E + +  P  S+  S     DV  SP   
Sbjct: 819  VNRRKHNTELRALHSQFEMVDSSSHHDNLMEENAYNNGPMESMVESASKNLDVLISP--- 875

Query: 738  SGVNESNGKQRRSALLSNKERLLLRKQALKMKKRPVLAVGRSNIVSGVAKTIKTHFQKHP 559
            +  N SN     +  LSNKERLLLRKQAL MKKRPVLAVGRSNIV+GVAKTI THF+KHP
Sbjct: 876  AADNVSNKMASTAKFLSNKERLLLRKQALNMKKRPVLAVGRSNIVTGVAKTINTHFKKHP 935

Query: 558  LAIVNIKGRARGTSVQEVVSKLEEATGAILVSQEPSKVILYRGWGASTTQDSNQSGVKQN 379
            LAIVN+KGRA+GTSVQEVV KL+EATGA+LVSQEPSKVILYRGWGA+   D    G K+N
Sbjct: 936  LAIVNVKGRAKGTSVQEVVLKLQEATGAVLVSQEPSKVILYRGWGAN---DEPARGDKRN 992


>ref|XP_012483758.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Gossypium raimondii]
 gb|KJB33712.1| hypothetical protein B456_006G027700 [Gossypium raimondii]
          Length = 1023

 Score =  850 bits (2197), Expect = 0.0
 Identities = 472/840 (56%), Positives = 586/840 (69%), Gaps = 16/840 (1%)
 Frame = -1

Query: 2850 RRLRGVGIGIKTRLKIGKAGITEGIVHGIHERWRRNELVKIVCEDMCRLNMKRTHDLLEI 2671
            +RLR VGIG K +LK+GKAGITEGIV+GIHERWR++E+V+IVCED+C++NMKRTH++LE 
Sbjct: 167  KRLRTVGIGEKRKLKVGKAGITEGIVNGIHERWRKSEVVRIVCEDICKMNMKRTHEVLER 226

Query: 2670 KTGGLVVWRAGSIIILYRGADYKYPYFFVNNNKPNDAXXXXXXXXXXXXXXXDVQESYSI 2491
            KTGGLV+WR+GS IILYRGA+YKYPYF  +    +D+               D  ES S 
Sbjct: 227  KTGGLVIWRSGSKIILYRGANYKYPYFSADKIGTHDSSSNASSDTNVDNKELDETESCSS 286

Query: 2490 GTDDVGSD---GQTKMTQTPLIKGVGSRTRVRFQLPGEAQLAEEADQLLHGLGPRFTDWY 2320
              + V +       KMT+  LI+GVGS +RVRFQLPGEA+L  EAD+LL GLGPRFTDW+
Sbjct: 287  EFNGVKTSTPKATDKMTKRALIQGVGSPSRVRFQLPGEAELVAEADRLLDGLGPRFTDWW 346

Query: 2319 GYDPLPVDADLLPAVVPGYRKPFRLLPFGVQSTLTNDEMTTLRRLGRPLPCHFALGRNRK 2140
            GY+PLPVD DLLPA++PGYR+PFRLLP+GV+S LTNDEMTTLRRLGRPLPCHFALGRNRK
Sbjct: 347  GYEPLPVDGDLLPAIIPGYRRPFRLLPYGVKSLLTNDEMTTLRRLGRPLPCHFALGRNRK 406

Query: 2139 HQGLAAAILKLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLLTRDKEYIVLYRGK 1960
             QGLAA+I+KLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLL+RDK++IVLYRGK
Sbjct: 407  LQGLAASIIKLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLLSRDKDFIVLYRGK 466

Query: 1959 DFLPATVSSAIEQRRNRGVDVLERKKLSRSSDVQENKSKEIGSSSAAEPSGMRDQKLELA 1780
            DFLP+ VSSAIE+RR   +    +        +QE   +    +S  + +  +D+K ++ 
Sbjct: 467  DFLPSAVSSAIEERRKHVIHAENQS----GKTMQEVHGEGAKIASENDINSAKDRKSDVF 522

Query: 1779 IEQRKKKSREAAIKKTTSKLSQAXXXXXXXXXXXXXXXXXXXXXXXEVDKEGITEEERYM 1600
              ++   S EA IK+T+SKLS A                       E+DKEGIT EERYM
Sbjct: 523  SIRKNLNSAEATIKRTSSKLSMALEKKAKAEKLLAELEQEVIPQQSEIDKEGITREERYM 582

Query: 1599 LRKVGLKMRPFLLLGRRGVFDGTVENMHLHWKYRELVKILSGETNIDELHAAARTLEAES 1420
            LRKVGL+M+PFLLLGRRGVFDGTVENMHLHWKYRELVKI+S ETN++ +H  A+ LEAES
Sbjct: 583  LRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIISKETNVEAVHQEAQILEAES 642

Query: 1419 GGILVAVERVRRGHAIIVYRGKNYKRPATLRPQTLLNKREALHRSIEAQRRESLKLQVLK 1240
            GGILVAVERV +G+AII YRGKNY+RP  LRPQTLL KREA+ RS+E QRR+SLKL +LK
Sbjct: 643  GGILVAVERVSKGYAIIFYRGKNYERPTCLRPQTLLTKREAMKRSLEEQRRKSLKLHILK 702

Query: 1239 LGKNVEELKLKLAKSEDIISNAEKDQ----NIRLEMKSL-SAEYGRPDVDLEGYESNSSD 1075
            L +N++ELK +L   ++  +    DQ    ++  EM++L S +  R D++         +
Sbjct: 703  LTRNIDELKHQLVVDKEASNTLAADQSRLPSVEEEMETLQSVKCARSDIEYHASPEGHLE 762

Query: 1074 QDDVQEREFDGGELVFSNENDSLKASEESLETDNENLPKVSPTE---QVEKDEFEFTEDN 904
              D  E          S +ND + A+    E   + L + S      +  K E EF+ ++
Sbjct: 763  AKDKSEST--------SMKNDRMVAAVSISEPSEQVLVEPSSIHDGVENHKTEPEFSSES 814

Query: 903  LKPSIELVKGKNETEEANMLNASTFPDPYKLEVSSSTEPCVSVTRS-----DVPSSPVHG 739
            +       + +    +  M+ +S+  D    E + +  P  S+  S     DV  SP   
Sbjct: 815  VNRRKHNTELRALHSQFEMVESSSHHDNLMEENAYNNGPMESMVESASKNLDVLISP--- 871

Query: 738  SGVNESNGKQRRSALLSNKERLLLRKQALKMKKRPVLAVGRSNIVSGVAKTIKTHFQKHP 559
            +  N SN     +  LSNKERLLLRKQAL MKKRPVLAVGRSNIV+GVAKTI THF+KHP
Sbjct: 872  AADNVSNKMASTAKFLSNKERLLLRKQALNMKKRPVLAVGRSNIVTGVAKTINTHFKKHP 931

Query: 558  LAIVNIKGRARGTSVQEVVSKLEEATGAILVSQEPSKVILYRGWGASTTQDSNQSGVKQN 379
            LAIVN+KGRA+GTSVQEVV KL+EATGA+LVSQEPSKVILYRGWGA+   D    G K+N
Sbjct: 932  LAIVNVKGRAKGTSVQEVVLKLQEATGAVLVSQEPSKVILYRGWGAN---DEPARGDKRN 988


>gb|PHT91786.1| hypothetical protein T459_06899 [Capsicum annuum]
          Length = 1038

 Score =  851 bits (2198), Expect = 0.0
 Identities = 476/846 (56%), Positives = 594/846 (70%), Gaps = 23/846 (2%)
 Frame = -1

Query: 2847 RLRGVGIGIKTRLKIGKAGITEGIVHGIHERWRRNELVKIVCEDMCRLNMKRTHDLLEIK 2668
            RLR +GI I+ +LKIGKAGITEGIV+GIHERWRR ELVKI CED+CRLNMKRTH+LLE K
Sbjct: 167  RLRTIGIAIRKKLKIGKAGITEGIVNGIHERWRRTELVKITCEDICRLNMKRTHELLEKK 226

Query: 2667 TGGLVVWRAGSIIILYRGADYKYPYFF---VNNNKPNDAXXXXXXXXXXXXXXXDVQESY 2497
            TGGLV+WR+GS IILYRGADYKYPYF      NN   DA                   S 
Sbjct: 227  TGGLVIWRSGSNIILYRGADYKYPYFSGSSFENNSAQDATPDLFTGAEEHM-------SN 279

Query: 2496 SIGTDDVGSDGQTKMTQTPLIKGVGSRTRVRFQLPGEAQLAEEADQLLHGLGPRFTDWYG 2317
            S G D V SD   + +   +I+GVGS  RVRF+LPGEA   EEAD+LL GLGPRFTDW+G
Sbjct: 280  SSGMDAVKSDALDRKSSPRVIQGVGSPDRVRFELPGEAAHTEEADKLLEGLGPRFTDWWG 339

Query: 2316 YDPLPVDADLLPAVVPGYRKPFRLLPFGVQSTLTNDEMTTLRRLGRPLPCHFALGRNRKH 2137
             +PLP+DADLLPA+VPGY+KPFRLLP+GV+  LTNDEMTTLRRLGRPLPCHFALG+NRK 
Sbjct: 340  CEPLPIDADLLPAIVPGYKKPFRLLPYGVKPKLTNDEMTTLRRLGRPLPCHFALGKNRKL 399

Query: 2136 QGLAAAILKLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLLTRDKEYIVLYRGKD 1957
            QGLAAAI+KLWEKCEIAK+AVKRGVQNTNSELMAEELKWLTGGTLL+RD+E+IV YRGKD
Sbjct: 400  QGLAAAIVKLWEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLSRDREFIVFYRGKD 459

Query: 1956 FLPATVSSAIEQRRNRGVDVLERKKLSRS-SDVQENKSKEIGSSSAAEPSGMRDQKLELA 1780
            FLP+ VSSAIE+RR + ++  +R  ++ S ++ +E K    GS S    +   +QK +L 
Sbjct: 460  FLPSAVSSAIEERRKQIIEEEKRSGINSSVANAKERKQSATGSVSDDGHANRNNQKADL- 518

Query: 1779 IEQRKKKSREAAIKKTTSKLSQAXXXXXXXXXXXXXXXXXXXXXXXEVDKEGITEEERYM 1600
             E++K  S EAAIK+T  KL+ A                       ++DKEGITEEERYM
Sbjct: 519  -EKKKLTSMEAAIKRTVDKLTTALEKKAEAEKLLLELEEDEVPQQSDMDKEGITEEERYM 577

Query: 1599 LRKVGLKMRPFLLLGRRGVFDGTVENMHLHWKYRELVKILSGETNIDELHAAARTLEAES 1420
            LRK+GL+M+PFLLLGRRGVFDGTVENMHLHWKYRELVK+++G  NI+E+H  AR LEAES
Sbjct: 578  LRKIGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVITGMKNIEEVHQIARMLEAES 637

Query: 1419 GGILVAVERVRRGHAIIVYRGKNYKRPATLRPQTLLNKREALHRSIEAQRRESLKLQVLK 1240
            GGILVA+ERV +G+AIIVYRGKNY+RPA+LRPQTLL+KREA+ RSIEAQRR+SLKL VLK
Sbjct: 638  GGILVAIERVNKGYAIIVYRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLHVLK 697

Query: 1239 LGKNVEELKLKLAKSEDIISNAEKD-QNIRLEMKSLSAEYGRPDVDLE-GYESNSSDQDD 1066
            L +N+E LK +LAK+E++I     D  + ++ +  LS   G  +          S D +D
Sbjct: 698  LTQNIEALKSRLAKNEEMIHIQSPDIVDKQVPVTGLSDAAGGTNYQPSLASPCTSEDSED 757

Query: 1065 V-QEREFDGGELVFSNENDSLKASEESLETDN-----ENLPKVSPTEQVEKDEFEFTEDN 904
            V ++ + +    + S+ +D+  +S++ + +D+          +  T Q +      T+++
Sbjct: 758  VAEDTDPNCPNELPSDSSDTDHSSQQDIPSDSSFQYESKAAAMYDTTQPQHQSISSTKES 817

Query: 903  LKPSIELVKGKNETEEANMLNASTFPDPYKL---EVSSSTEPC-------VSVTRSDVPS 754
                   V  K          +++F +  K+   E  S ++P        VS   S  P 
Sbjct: 818  KSMFNVNVDKKVFGSAVGEFVSTSFKEEVKIHFSETKSFSKPQEVDNKKEVSQVDSVKPQ 877

Query: 753  SPVHGSGVNESNGKQRRSALLSNKERLLLRKQALKMKKRPVLAVGRSNIVSGVAKTIKTH 574
              +  S  + S G   +   LSN+ERLLLRKQALKMKK+PVLAVGRSNIV+GVAK IK H
Sbjct: 878  QELR-STRSRSEGMSPKKIQLSNRERLLLRKQALKMKKQPVLAVGRSNIVTGVAKNIKEH 936

Query: 573  FQKHPLAIVNIKGRARGTSVQEVVSKLEEATGAILVSQEPSKVILYRGWGASTTQ-DSNQ 397
            F+K+PLAIVN+KGRA+GTSV+EVV KLE+ATGA+LVSQEPSKVILYRGWGA   +  SN 
Sbjct: 937  FKKYPLAIVNVKGRAKGTSVREVVFKLEQATGAVLVSQEPSKVILYRGWGAGEERASSNG 996

Query: 396  SGVKQN 379
            +G + +
Sbjct: 997  NGTRDS 1002


>ref|XP_016668305.1| PREDICTED: CRM-domain containing factor CFM2, chloroplastic-like
            isoform X1 [Gossypium hirsutum]
          Length = 1027

 Score =  850 bits (2196), Expect = 0.0
 Identities = 471/840 (56%), Positives = 586/840 (69%), Gaps = 16/840 (1%)
 Frame = -1

Query: 2850 RRLRGVGIGIKTRLKIGKAGITEGIVHGIHERWRRNELVKIVCEDMCRLNMKRTHDLLEI 2671
            +RLR VGIG K +LK+GKAGITEGIV+GIHERWR++E+V+IVCED+C++NMKRTH++LE 
Sbjct: 171  KRLRTVGIGEKRKLKVGKAGITEGIVNGIHERWRKSEVVRIVCEDICKMNMKRTHEVLER 230

Query: 2670 KTGGLVVWRAGSIIILYRGADYKYPYFFVNNNKPNDAXXXXXXXXXXXXXXXDVQESYSI 2491
            KTGGLV+WR+GS IILYRGA+YKYPYF  +    +D+               D  ES S 
Sbjct: 231  KTGGLVIWRSGSKIILYRGANYKYPYFSADKIGTHDSSSNASPDTNVANKELDETESCSS 290

Query: 2490 GTDDVGSD---GQTKMTQTPLIKGVGSRTRVRFQLPGEAQLAEEADQLLHGLGPRFTDWY 2320
              + V +       KMT+  LI+GVGS +RVRFQLPGEA+L  EAD+LL GLGPRFTDW+
Sbjct: 291  EFNGVKTSTPKATDKMTKRALIQGVGSPSRVRFQLPGEAELVAEADRLLDGLGPRFTDWW 350

Query: 2319 GYDPLPVDADLLPAVVPGYRKPFRLLPFGVQSTLTNDEMTTLRRLGRPLPCHFALGRNRK 2140
            GY+PLPVD DLLPA++PGYR+PFRLLP+GV+S LTNDEMTTLRRLGRPLPCHFALGRNRK
Sbjct: 351  GYEPLPVDGDLLPAIIPGYRRPFRLLPYGVKSLLTNDEMTTLRRLGRPLPCHFALGRNRK 410

Query: 2139 HQGLAAAILKLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLLTRDKEYIVLYRGK 1960
             QGLAA+I+KLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLL+RDK++IVLYRGK
Sbjct: 411  LQGLAASIIKLWEKCEIAKIAVKRGVQNTNSELMAEELKWLTGGTLLSRDKDFIVLYRGK 470

Query: 1959 DFLPATVSSAIEQRRNRGVDVLERKKLSRSSDVQENKSKEIGSSSAAEPSGMRDQKLELA 1780
            DFLP+ VSSAIE+RR   +    +        +QE   +   ++S  + +  +D K ++ 
Sbjct: 471  DFLPSAVSSAIEERRKHVIHAENQS----GKTMQEVNGEGTKTASENDINSAKDHKSDVF 526

Query: 1779 IEQRKKKSREAAIKKTTSKLSQAXXXXXXXXXXXXXXXXXXXXXXXEVDKEGITEEERYM 1600
              Q+   S EA IK+T+SKLS A                       E+DKEGIT EERYM
Sbjct: 527  SVQKNLNSTEATIKRTSSKLSMALEKKAKAEKLLAQLEQEVIPQQSEIDKEGITREERYM 586

Query: 1599 LRKVGLKMRPFLLLGRRGVFDGTVENMHLHWKYRELVKILSGETNIDELHAAARTLEAES 1420
            LRKVGL+M+PFLLLGRRGVFDGTVENMHLHWKYRELVKI+S ETN++ +H  A+ LEAES
Sbjct: 587  LRKVGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKIISKETNVEAVHQEAQILEAES 646

Query: 1419 GGILVAVERVRRGHAIIVYRGKNYKRPATLRPQTLLNKREALHRSIEAQRRESLKLQVLK 1240
            GGILVAVERV +G+AII YRGKNY+RP  LRPQTLL KREA+ RS+  QRR+SLKL +LK
Sbjct: 647  GGILVAVERVSKGYAIIFYRGKNYERPTCLRPQTLLTKREAMKRSLVEQRRKSLKLHILK 706

Query: 1239 LGKNVEELKLKLAKSEDIISNAEKDQ----NIRLEMKSL-SAEYGRPDVDLEGYESNSSD 1075
            L +N++ELK +L   ++  +    DQ    ++  EM++L S +  R D++         +
Sbjct: 707  LTRNIDELKHQLVVDKEASNKLAADQSRLPSVEEEMETLQSVKCARSDIEYHASPEGHLE 766

Query: 1074 QDDVQEREFDGGELVFSNENDSLKASEESLETDNENLPKVSPTE---QVEKDEFEFTEDN 904
              D  E          S +ND + A+    +   + L + S      +  K E EF+ ++
Sbjct: 767  AKDKPEST--------SMKNDRMIAAVSISQPSEQVLVEPSSIHDGVENHKTESEFSSES 818

Query: 903  LKPSIELVKGKNETEEANMLNASTFPDPYKLEVSSSTEPCVSVTRS-----DVPSSPVHG 739
            +       + +    +  M+++S+  D    E + +  P  S+  S     DV  SP   
Sbjct: 819  VNRRKHNTELRALHSQFEMVDSSSHHDNLMEENAYNNGPMESMVESASKNLDVLISP--- 875

Query: 738  SGVNESNGKQRRSALLSNKERLLLRKQALKMKKRPVLAVGRSNIVSGVAKTIKTHFQKHP 559
            +  N SN     +  LSNKERLLLRKQAL MKKRPVLAVGRSNIV+GVAKTI THF+KHP
Sbjct: 876  AADNVSNKMASTAKFLSNKERLLLRKQALNMKKRPVLAVGRSNIVTGVAKTINTHFKKHP 935

Query: 558  LAIVNIKGRARGTSVQEVVSKLEEATGAILVSQEPSKVILYRGWGASTTQDSNQSGVKQN 379
            LAIVN+KGRA+GTSVQEVV KL+EATGA+LVSQEPSKVILYRGWGA+   D    G K+N
Sbjct: 936  LAIVNVKGRAKGTSVQEVVLKLQEATGAVLVSQEPSKVILYRGWGAN---DEPARGDKRN 992