BLASTX nr result

ID: Chrysanthemum21_contig00003659 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00003659
         (622 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023766371.1| LOB domain-containing protein 20 [Lactuca sa...    74   3e-12
ref|XP_021990734.1| LOB domain-containing protein 20 [Helianthus...    70   4e-11
gb|KVI00024.1| lateral organ boundaries domain-containing protei...    68   3e-10
gb|KVH90536.1| lateral organ boundaries domain-containing protei...    59   7e-07

>ref|XP_023766371.1| LOB domain-containing protein 20 [Lactuca sativa]
 gb|PLY83551.1| hypothetical protein LSAT_1X55200 [Lactuca sativa]
          Length = 244

 Score = 73.6 bits (179), Expect = 3e-12
 Identities = 43/99 (43%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
 Frame = +2

Query: 164 IYTISQYLQFDIDDIRSGDTSVV------GATWHLELGMVQNQLIHNKLLVADALHSSEQ 325
           + TIS   Q  + D   G  S V       A    EL MVQNQLI+N+L+VA+A+ +S+Q
Sbjct: 100 VVTISYEAQARLSDPVYGCVSTVLALQQQVAALQTELAMVQNQLINNRLIVANAIQNSQQ 159

Query: 326 QMEPMHHLSLLQPVYNGAAS*KWLFANAHAISNKLTPIG 442
           Q+EPMHHLSLLQP Y+ A+S      N ++  + L  +G
Sbjct: 160 QLEPMHHLSLLQPAYSNASSASNNILNMNSFDSSLNNLG 198


>ref|XP_021990734.1| LOB domain-containing protein 20 [Helianthus annuus]
 gb|OTG09011.1| putative LOB domain-containing protein 20 [Helianthus annuus]
          Length = 237

 Score = 70.5 bits (171), Expect = 4e-11
 Identities = 41/80 (51%), Positives = 51/80 (63%), Gaps = 6/80 (7%)
 Frame = +2

Query: 164 IYTISQYLQFDIDDIRSGDTSVV------GATWHLELGMVQNQLIHNKLLVADALHSSEQ 325
           + TIS   Q  + D   G  S V       A+   EL MVQNQLI+N+LLVA+AL  S+Q
Sbjct: 91  VVTISYEAQARLSDPVYGCVSTVLALQQQVASLQTELAMVQNQLINNRLLVANALQGSQQ 150

Query: 326 QMEPMHHLSLLQPVYNGAAS 385
           Q+EP HHLSLLQP Y+ A+S
Sbjct: 151 QLEPAHHLSLLQPAYSNASS 170


>gb|KVI00024.1| lateral organ boundaries domain-containing protein [Cynara
           cardunculus var. scolymus]
          Length = 232

 Score = 67.8 bits (164), Expect = 3e-10
 Identities = 32/50 (64%), Positives = 42/50 (84%)
 Frame = +2

Query: 236 ATWHLELGMVQNQLIHNKLLVADALHSSEQQMEPMHHLSLLQPVYNGAAS 385
           A    EL MVQNQLI+N+LLVA++L SS+QQ+EP+HHLSLL+P Y+ A+S
Sbjct: 116 AALQTELTMVQNQLINNRLLVANSLQSSQQQLEPVHHLSLLRPAYSNASS 165


>gb|KVH90536.1| lateral organ boundaries domain-containing protein [Cynara
           cardunculus var. scolymus]
          Length = 232

 Score = 58.5 bits (140), Expect = 7e-07
 Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
 Frame = +2

Query: 146 IFWRS*-IYTISQYLQFDIDDIRSGDTSVVGATWHLELGMVQNQLIHNKLLVADALHSSE 322
           + WR+  + TIS   Q  + D   G  S V A    EL MVQNQLI+N+++ A+AL  S 
Sbjct: 92  VHWRNHAVVTISYEAQARLSDPVYGCVSTVVAALQAELAMVQNQLINNRVMAANALQGSL 151

Query: 323 QQMEPMHHLSLLQPVYNGAAS 385
           QQ + +HH   LQP Y+ A++
Sbjct: 152 QQPQAVHHPRWLQPEYSNASN 172