BLASTX nr result
ID: Chrysanthemum21_contig00003640
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum21_contig00003640
(456 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_023745069.1| probable mediator of RNA polymerase II trans... 58 7e-07
gb|ESR41111.1| hypothetical protein CICLE_v10025964mg [Citrus cl... 57 1e-06
gb|KDO53373.1| hypothetical protein CISIN_1g018587mg [Citrus sin... 57 2e-06
gb|ESR41112.1| hypothetical protein CICLE_v10025964mg [Citrus cl... 57 2e-06
dbj|GAY59595.1| hypothetical protein CUMW_195650 [Citrus unshiu] 57 2e-06
gb|KDO53372.1| hypothetical protein CISIN_1g018587mg [Citrus sin... 57 2e-06
ref|XP_006427873.1| probable mediator of RNA polymerase II trans... 57 2e-06
ref|XP_020988084.1| probable mediator of RNA polymerase II trans... 53 3e-06
ref|XP_022013497.1| probable mediator of RNA polymerase II trans... 56 3e-06
ref|XP_023544969.1| probable mediator of RNA polymerase II trans... 56 3e-06
ref|XP_022950583.1| probable mediator of RNA polymerase II trans... 56 3e-06
ref|XP_008440997.1| PREDICTED: probable mediator of RNA polymera... 56 3e-06
ref|XP_022977926.1| probable mediator of RNA polymerase II trans... 56 3e-06
gb|ERN12985.1| hypothetical protein AMTR_s00040p00061970 [Ambore... 55 5e-06
ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera... 55 5e-06
ref|XP_020527370.1| probable mediator of RNA polymerase II trans... 55 5e-06
ref|XP_011625935.1| probable mediator of RNA polymerase II trans... 55 5e-06
ref|XP_002279514.1| PREDICTED: probable mediator of RNA polymera... 55 6e-06
ref|XP_002279496.2| PREDICTED: probable mediator of RNA polymera... 55 6e-06
ref|XP_010649433.1| PREDICTED: probable mediator of RNA polymera... 55 6e-06
>ref|XP_023745069.1| probable mediator of RNA polymerase II transcription subunit 26c
[Lactuca sativa]
gb|PLY65262.1| hypothetical protein LSAT_5X40301 [Lactuca sativa]
Length = 348
Score = 57.8 bits (138), Expect = 7e-07
Identities = 26/31 (83%), Positives = 30/31 (96%)
Frame = +1
Query: 301 RHVNQLRKHLSSKVRSLVKHLVRKWKELVDE 393
RHVN+LRKH S++VR+LVKHLVRKWKELVDE
Sbjct: 160 RHVNRLRKHPSNEVRTLVKHLVRKWKELVDE 190
>gb|ESR41111.1| hypothetical protein CICLE_v10025964mg [Citrus clementina]
Length = 218
Score = 56.6 bits (135), Expect = 1e-06
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 301 RHVNQLRKHLSSKVRSLVKHLVRKWKELVDE 393
RHVNQLRKH S+ VR LVKHLVRKWK++VDE
Sbjct: 164 RHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
>gb|KDO53373.1| hypothetical protein CISIN_1g018587mg [Citrus sinensis]
Length = 286
Score = 56.6 bits (135), Expect = 2e-06
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 301 RHVNQLRKHLSSKVRSLVKHLVRKWKELVDE 393
RHVNQLRKH S+ VR LVKHLVRKWK++VDE
Sbjct: 164 RHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
>gb|ESR41112.1| hypothetical protein CICLE_v10025964mg [Citrus clementina]
Length = 286
Score = 56.6 bits (135), Expect = 2e-06
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 301 RHVNQLRKHLSSKVRSLVKHLVRKWKELVDE 393
RHVNQLRKH S+ VR LVKHLVRKWK++VDE
Sbjct: 164 RHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
>dbj|GAY59595.1| hypothetical protein CUMW_195650 [Citrus unshiu]
Length = 353
Score = 56.6 bits (135), Expect = 2e-06
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 301 RHVNQLRKHLSSKVRSLVKHLVRKWKELVDE 393
RHVNQLRKH S+ VR LVKHLVRKWK++VDE
Sbjct: 164 RHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
>gb|KDO53372.1| hypothetical protein CISIN_1g018587mg [Citrus sinensis]
Length = 353
Score = 56.6 bits (135), Expect = 2e-06
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 301 RHVNQLRKHLSSKVRSLVKHLVRKWKELVDE 393
RHVNQLRKH S+ VR LVKHLVRKWK++VDE
Sbjct: 164 RHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
>ref|XP_006427873.1| probable mediator of RNA polymerase II transcription subunit 26c
[Citrus clementina]
ref|XP_006464554.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Citrus sinensis]
gb|ESR41113.1| hypothetical protein CICLE_v10025964mg [Citrus clementina]
Length = 353
Score = 56.6 bits (135), Expect = 2e-06
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 301 RHVNQLRKHLSSKVRSLVKHLVRKWKELVDE 393
RHVNQLRKH S+ VR LVKHLVRKWK++VDE
Sbjct: 164 RHVNQLRKHSSNDVRKLVKHLVRKWKDIVDE 194
>ref|XP_020988084.1| probable mediator of RNA polymerase II transcription subunit 26c
[Arachis duranensis]
Length = 89
Score = 52.8 bits (125), Expect = 3e-06
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 301 RHVNQLRKHLSSKVRSLVKHLVRKWKELVDE 393
RHVNQLRKH S+ VR LVK LVRKWKE+VDE
Sbjct: 14 RHVNQLRKHSSNGVRRLVKLLVRKWKEIVDE 44
>ref|XP_022013497.1| probable mediator of RNA polymerase II transcription subunit 26c
[Helianthus annuus]
gb|OTF96599.1| putative transcription elongation factor (TFIIS) family protein
[Helianthus annuus]
Length = 342
Score = 55.8 bits (133), Expect = 3e-06
Identities = 26/31 (83%), Positives = 29/31 (93%)
Frame = +1
Query: 301 RHVNQLRKHLSSKVRSLVKHLVRKWKELVDE 393
RHVN+LRKH S++VRSLVK LVRKWKELVDE
Sbjct: 151 RHVNRLRKHPSNEVRSLVKQLVRKWKELVDE 181
>ref|XP_023544969.1| probable mediator of RNA polymerase II transcription subunit 26c
[Cucurbita pepo subsp. pepo]
Length = 345
Score = 55.8 bits (133), Expect = 3e-06
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 301 RHVNQLRKHLSSKVRSLVKHLVRKWKELVDE 393
RHVN+LRKH S+ VR LVKHLVRKWKE+VDE
Sbjct: 160 RHVNRLRKHSSNDVRRLVKHLVRKWKEIVDE 190
>ref|XP_022950583.1| probable mediator of RNA polymerase II transcription subunit 26c
[Cucurbita moschata]
Length = 345
Score = 55.8 bits (133), Expect = 3e-06
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 301 RHVNQLRKHLSSKVRSLVKHLVRKWKELVDE 393
RHVN+LRKH S+ VR LVKHLVRKWKE+VDE
Sbjct: 160 RHVNRLRKHSSNDVRRLVKHLVRKWKEIVDE 190
>ref|XP_008440997.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Cucumis melo]
Length = 345
Score = 55.8 bits (133), Expect = 3e-06
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 301 RHVNQLRKHLSSKVRSLVKHLVRKWKELVDE 393
RHVN+LRKH S+ VR LVKHLVRKWKE+VDE
Sbjct: 160 RHVNRLRKHSSNDVRRLVKHLVRKWKEIVDE 190
>ref|XP_022977926.1| probable mediator of RNA polymerase II transcription subunit 26c
[Cucurbita maxima]
Length = 346
Score = 55.8 bits (133), Expect = 3e-06
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 301 RHVNQLRKHLSSKVRSLVKHLVRKWKELVDE 393
RHVN+LRKH S+ VR LVKHLVRKWKE+VDE
Sbjct: 160 RHVNRLRKHSSNDVRRLVKHLVRKWKEIVDE 190
>gb|ERN12985.1| hypothetical protein AMTR_s00040p00061970 [Amborella trichopoda]
Length = 330
Score = 55.5 bits (132), Expect = 5e-06
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 301 RHVNQLRKHLSSKVRSLVKHLVRKWKELVDE 393
RHVN LRKH S++VR LVKHL+RKWKELVDE
Sbjct: 179 RHVNGLRKHPSTEVRRLVKHLIRKWKELVDE 209
>ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c [Cucumis sativus]
gb|KGN48394.1| hypothetical protein Csa_6G486670 [Cucumis sativus]
Length = 345
Score = 55.5 bits (132), Expect = 5e-06
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 301 RHVNQLRKHLSSKVRSLVKHLVRKWKELVDE 393
RHVN+LRKH S+ VR LVKHLVRKWKE+VDE
Sbjct: 160 RHVNRLRKHPSNDVRRLVKHLVRKWKEIVDE 190
>ref|XP_020527370.1| probable mediator of RNA polymerase II transcription subunit 26c
isoform X2 [Amborella trichopoda]
Length = 357
Score = 55.5 bits (132), Expect = 5e-06
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 301 RHVNQLRKHLSSKVRSLVKHLVRKWKELVDE 393
RHVN LRKH S++VR LVKHL+RKWKELVDE
Sbjct: 179 RHVNGLRKHPSTEVRRLVKHLIRKWKELVDE 209
>ref|XP_011625935.1| probable mediator of RNA polymerase II transcription subunit 26c
isoform X1 [Amborella trichopoda]
Length = 358
Score = 55.5 bits (132), Expect = 5e-06
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 301 RHVNQLRKHLSSKVRSLVKHLVRKWKELVDE 393
RHVN LRKH S++VR LVKHL+RKWKELVDE
Sbjct: 179 RHVNGLRKHPSTEVRRLVKHLIRKWKELVDE 209
>ref|XP_002279514.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X6 [Vitis vinifera]
Length = 305
Score = 55.1 bits (131), Expect = 6e-06
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 301 RHVNQLRKHLSSKVRSLVKHLVRKWKELVDE 393
RHVN+LRKH S+ VR LVKHLVRKWK+LVDE
Sbjct: 152 RHVNRLRKHPSNDVRRLVKHLVRKWKDLVDE 182
>ref|XP_002279496.2| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X5 [Vitis vinifera]
Length = 331
Score = 55.1 bits (131), Expect = 6e-06
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 301 RHVNQLRKHLSSKVRSLVKHLVRKWKELVDE 393
RHVN+LRKH S+ VR LVKHLVRKWK+LVDE
Sbjct: 152 RHVNRLRKHPSNDVRRLVKHLVRKWKDLVDE 182
>ref|XP_010649433.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c isoform X4 [Vitis vinifera]
emb|CBI37628.3| unnamed protein product, partial [Vitis vinifera]
Length = 332
Score = 55.1 bits (131), Expect = 6e-06
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 301 RHVNQLRKHLSSKVRSLVKHLVRKWKELVDE 393
RHVN+LRKH S+ VR LVKHLVRKWK+LVDE
Sbjct: 152 RHVNRLRKHPSNDVRRLVKHLVRKWKDLVDE 182