BLASTX nr result

ID: Chrysanthemum21_contig00003435 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00003435
         (890 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTG33564.1| putative CALMODULIN-BINDING PROTEIN, Reverse tran...   131   1e-30
ref|XP_023764989.1| calmodulin-binding protein 60 A-like [Lactuc...    92   6e-17
gb|PLY84498.1| hypothetical protein LSAT_1X26300 [Lactuca sativa]      82   1e-13
ref|XP_023764988.1| calmodulin-binding protein 60 A-like [Lactuc...    82   1e-13

>gb|OTG33564.1| putative CALMODULIN-BINDING PROTEIN, Reverse transcriptase,
            RNA-dependent DNA polymerase [Helianthus annuus]
          Length = 780

 Score =  131 bits (330), Expect = 1e-30
 Identities = 88/199 (44%), Positives = 109/199 (54%), Gaps = 2/199 (1%)
 Frame = +2

Query: 2    GLTAESQFIPSNKLPYDKKADAQELIXXXXXXXXXXXXFNSEASLINHLQSRTTLNSL-R 178
            G+ AES+F+ S+KLP DK+ADAQ+LI            FN +  LINHLQ R  LN L  
Sbjct: 609  GIVAESKFVSSDKLPDDKRADAQKLIASSSEHWKEVVSFNDQDLLINHLQQRAILNPLSH 668

Query: 179  KNLNVVIPDTSDTYDHTCLASPHDSTPIAQIGVAGQSQSPKRPAVEQATSYSPKKPRDDH 358
             NLNVVIP T D  +HT L SP             +SQSPKRPA E A+S SPK+PR DH
Sbjct: 669  NNLNVVIPQTFDPSNHTNLTSP-------------KSQSPKRPASEHASSNSPKQPRYDH 715

Query: 359  PRMSPST-PSVGSLTSKVIVSETFNKCQEQNSLLTPAVXXXXXXXXXXXXSHYDINPTQR 535
            P+ SPS+  SVG  TS           +E N+L  P               + D+   +R
Sbjct: 716  PKSSPSSMTSVGMDTS---------IRREANNLQLP-----LDDGDISMYLNLDLR-DRR 760

Query: 536  WKMVWRVVGWISIFSKVRK 592
            WK+VW  VGWIS+  K+RK
Sbjct: 761  WKIVWCAVGWISVMIKLRK 779


>ref|XP_023764989.1| calmodulin-binding protein 60 A-like [Lactuca sativa]
 gb|PLY84535.1| hypothetical protein LSAT_1X26320 [Lactuca sativa]
          Length = 621

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 72/204 (35%), Positives = 97/204 (47%), Gaps = 8/204 (3%)
 Frame = +2

Query: 2   GLTAESQFIPSNKLPYDKKADAQELIXXXXXXXXXXXXFNSEASLINHLQ--SRTTLNSL 175
           GL ++S F+P  KL  +KKAD ++L+            F  EA+LINHLQ  + TTLNSL
Sbjct: 441 GLVSDSLFLPFYKLSNEKKADGEKLVASASEQWREVVFFEDEAALINHLQPPTSTTLNSL 500

Query: 176 RKNL--NVVIPDTSDTYDHTCLASPHDSTPIAQIGVAGQ-SQSPKRPAVE---QATSYSP 337
              L   V++   + T   T + + +       +G+ GQ SQSPKRPA E     ++YSP
Sbjct: 501 PNGLLNLVILQKNNHTGLITTIENHNHWKNNTIVGLTGQSSQSPKRPASEFEHVISNYSP 560

Query: 338 KKPRDDHPRMSPSTPSVGSLTSKVIVSETFNKCQEQNSLLTPAVXXXXXXXXXXXXSHYD 517
           KKPRDD                     +T N+   Q                     + +
Sbjct: 561 KKPRDD--------------------MDTENEDYMQ---------------------YLN 579

Query: 518 INPTQRWKMVWRVVGWISIFSKVR 589
            +  Q+WK VW VVGWISIFSKVR
Sbjct: 580 FSHAQKWKTVWCVVGWISIFSKVR 603


>gb|PLY84498.1| hypothetical protein LSAT_1X26300 [Lactuca sativa]
          Length = 573

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 72/203 (35%), Positives = 93/203 (45%), Gaps = 7/203 (3%)
 Frame = +2

Query: 2   GLTAESQFIPSNKLPYDKKADAQELIXXXXXXXXXXXXFNSEASLINHLQ--SRTTLNSL 175
           GL ++S F+P ++L  +KKAD ++++            F  EASLINHLQ  + TTLNS 
Sbjct: 394 GLVSDSLFLPLDELSNEKKADGEKIVVSASEQWREVVFFEDEASLINHLQPPTITTLNSF 453

Query: 176 -RKNLNVVIPDTSD-TYDHTCLASPHDSTPIAQIGVAG--QSQSPKRPAVEQATSYSPKK 343
              +LN+VIP  ++ T   T + S   S  I  +   G   SQ+ KR A E A S SPKK
Sbjct: 454 PYGDLNLVIPQKNNPTRLITTIESHRKSNFIVGVTPMGGQSSQNRKRLASEHAISNSPKK 513

Query: 344 PRDDHPRMSPSTPSVGSLTSKVIVSETFNKCQEQNSLLTPAVXXXXXXXXXXXXSHYDIN 523
           PRD+              T      +  N  Q Q                          
Sbjct: 514 PRDE--------------TDDEDFMQYLNFSQSQ-------------------------- 533

Query: 524 PTQRWK-MVWRVVGWISIFSKVR 589
             Q+WK  VW VVGWISIFSKVR
Sbjct: 534 -AQKWKTSVWCVVGWISIFSKVR 555


>ref|XP_023764988.1| calmodulin-binding protein 60 A-like [Lactuca sativa]
          Length = 577

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 72/203 (35%), Positives = 93/203 (45%), Gaps = 7/203 (3%)
 Frame = +2

Query: 2   GLTAESQFIPSNKLPYDKKADAQELIXXXXXXXXXXXXFNSEASLINHLQ--SRTTLNSL 175
           GL ++S F+P ++L  +KKAD ++++            F  EASLINHLQ  + TTLNS 
Sbjct: 398 GLVSDSLFLPLDELSNEKKADGEKIVVSASEQWREVVFFEDEASLINHLQPPTITTLNSF 457

Query: 176 -RKNLNVVIPDTSD-TYDHTCLASPHDSTPIAQIGVAG--QSQSPKRPAVEQATSYSPKK 343
              +LN+VIP  ++ T   T + S   S  I  +   G   SQ+ KR A E A S SPKK
Sbjct: 458 PYGDLNLVIPQKNNPTRLITTIESHRKSNFIVGVTPMGGQSSQNRKRLASEHAISNSPKK 517

Query: 344 PRDDHPRMSPSTPSVGSLTSKVIVSETFNKCQEQNSLLTPAVXXXXXXXXXXXXSHYDIN 523
           PRD+              T      +  N  Q Q                          
Sbjct: 518 PRDE--------------TDDEDFMQYLNFSQSQ-------------------------- 537

Query: 524 PTQRWK-MVWRVVGWISIFSKVR 589
             Q+WK  VW VVGWISIFSKVR
Sbjct: 538 -AQKWKTSVWCVVGWISIFSKVR 559


Top