BLASTX nr result

ID: Chrysanthemum21_contig00002456 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00002456
         (874 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022530748.1| LOW QUALITY PROTEIN: titin-like [Astyanax me...    61   1e-06

>ref|XP_022530748.1| LOW QUALITY PROTEIN: titin-like [Astyanax mexicanus]
          Length = 2874

 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 56/182 (30%), Positives = 68/182 (37%), Gaps = 11/182 (6%)
 Frame = -1

Query: 523  PISVPFQHRNFSP*THLLQGLFQHSNPSISAPTSGPRCTHFSIKTHPIQPLFQHSNPLIS 344
            P S   +     P THL+     H  P+   PTS PR T      HP   L     P   
Sbjct: 2049 PTSFHLKTHLVHPKTHLISPRKAHLVPT-QKPTSPPRSTQKPTSFHPKTHLVPPQRPTSK 2107

Query: 343  APISAPKRPISAPKLSPI*ARKTTHLSP*THSF--KTP---------FQPPNAAVSAPKP 197
                 PK  +  PK  P   +K T   P TH    K P           P N   S  KP
Sbjct: 2108 PTSFHPKTHLVPPKNPPRSTQKPTSFHPKTHLVPPKNPPHFTPKAHLVPPKNPPRSTSKP 2167

Query: 196  TPFQPLNVHLNARFQPQNFHPFEPAKRLI*APKPTRLGPHFSPQTQQFQLPFQHPNPPHF 17
            T F P   HL +  +P +FHP    K  +  PK         P++ Q    F   NPPHF
Sbjct: 2168 TLFHP-KTHLISPRKPTSFHP----KTHLVPPKNPPRSTKNPPRSTQKPTSFHLENPPHF 2222

Query: 16   SP 11
            +P
Sbjct: 2223 TP 2224



 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 58/182 (31%), Positives = 72/182 (39%), Gaps = 20/182 (10%)
 Frame = -1

Query: 496  NFSP*THLLQGLFQHSNPSISAPTSGPRCTHFSIKTHPIQPLFQHSNPLISAPISA-PKR 320
            +F P THL+        P  + P S  + T F  KTH I P           P S  PK 
Sbjct: 1246 SFHPKTHLV--------PPKNPPRSTQKPTSFHPKTHLISP---------RKPTSFHPKT 1288

Query: 319  PISAPKLSPI*ARKTTHLSP*THSFK----TPFQPPNAAVSAPKPTPFQPLNVHL----- 167
             +  PK  P   +K T   P TH       T F P    +S  KPT F P   HL     
Sbjct: 1289 HLVPPKNPPRSTQKPTSFHPKTHLISPRKPTSFHPKTHLISPRKPTSFHP-KTHLVPPKN 1347

Query: 166  --NARFQPQNFHPFEPAKRLI*APKPTRLGPHFSPQTQQFQLPFQHP--------NPPHF 17
               +  +P +FHP  P +      KPT   P   P++ Q    F HP        NPPHF
Sbjct: 1348 PPRSTQKPTSFHPESPPRS---TQKPTSFHPESPPRSTQKPTSF-HPKTHLVPPENPPHF 1403

Query: 16   SP 11
            +P
Sbjct: 1404 TP 1405


Top