BLASTX nr result

ID: Chrysanthemum21_contig00002222 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00002222
         (729 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023744745.1| protein transport protein SEC16B homolog [La...    77   3e-12
gb|KVH89803.1| hypothetical protein Ccrd_008213 [Cynara carduncu...    75   8e-12
ref|XP_022015736.1| protein transport protein SEC16B homolog [He...    67   4e-09
ref|XP_021977759.1| protein transport protein SEC16B homolog iso...    64   5e-08
ref|XP_021977758.1| protein transport protein SEC16B homolog iso...    64   5e-08
gb|KVH91941.1| COPII coat assembly protein, Sec16 [Cynara cardun...    59   4e-06

>ref|XP_023744745.1| protein transport protein SEC16B homolog [Lactuca sativa]
 gb|PLY65510.1| hypothetical protein LSAT_3X100 [Lactuca sativa]
          Length = 1453

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 59/163 (36%), Positives = 76/163 (46%), Gaps = 17/163 (10%)
 Frame = +1

Query: 280 NDNSKVTALVSDNSKLLVNNDEIXXXXXXVKAFANLSISXXXXXXXXXXXXXXXXXXXXX 459
           +D+ KVT L S+ +KL   ND         KAFANL IS                     
Sbjct: 25  DDDYKVTPLSSETTKLADGNDS-----DDAKAFANLGISDVGTGLEDLGKVGEACSSIDG 79

Query: 460 PSR-------------LVSSNSFAFDCVNHQV-VENGNVAKVGEEDLNYGSTGGIKEVQW 597
            ++             LVSSNSFAFD V+ +   E   +      D   G   G+KEVQW
Sbjct: 80  DTKHASTDTFLDHGRPLVSSNSFAFDSVSEEPNTEVAGLDSTASWDHGSGGGPGVKEVQW 139

Query: 598 SAFGTDGAQDSFN--ADEPDFFNGFGD-GVDQMGKGGNLLATE 717
           +AF T+ A++  N      DFF  FGD  VDQ+GKGGNL++ E
Sbjct: 140 AAFATEPAENDGNGFGSYNDFFTEFGDSSVDQIGKGGNLVSRE 182


>gb|KVH89803.1| hypothetical protein Ccrd_008213 [Cynara cardunculus var. scolymus]
          Length = 1457

 Score = 75.5 bits (184), Expect = 8e-12
 Identities = 43/94 (45%), Positives = 55/94 (58%), Gaps = 8/94 (8%)
 Frame = +1

Query: 469 LVSSNSFAFDCVNHQVVENGNVAK-----VGEEDLNYGSTGGIKEVQWSAFGTDGAQDSF 633
           LV+SNSFAFD VN +        K        E+   G T G+KEVQWSAF +D  ++  
Sbjct: 104 LVNSNSFAFDSVNEEADNEATGLKEPLDSTASENHGSGGTAGVKEVQWSAFASDSVENGQ 163

Query: 634 NA--DEPDFFNGFGDG-VDQMGKGGNLLATESAN 726
           NA    PDFFN FGD  VDQ+GK  NL++++  N
Sbjct: 164 NAFGSYPDFFNAFGDSPVDQIGKEDNLISSKPNN 197


>ref|XP_022015736.1| protein transport protein SEC16B homolog [Helianthus annuus]
 gb|OTF91520.1| putative RGPR-related protein [Helianthus annuus]
          Length = 1363

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 55/163 (33%), Positives = 75/163 (46%), Gaps = 20/163 (12%)
 Frame = +1

Query: 286 NSKVTALVSDNSKLLVNNDEIXXXXXXVKAFANLSISXXXXXXXXXXXXXXXXXXXXXP- 462
           N    AL  + + ++ +ND         KAFANLSIS                       
Sbjct: 29  NPPALALKEEINNIVDDNDS-----DDAKAFANLSISDVGAGVEDLGEVGLEEDSLLITK 83

Query: 463 --------SRLVSSNSFAFDCVNHQVVENGN------VAKVGEEDLNYGS--TGGIKEVQ 594
                   SR+VSSNS   D   +   +NG       V   G ED N GS  T G+KEVQ
Sbjct: 84  EEFSNVDSSRIVSSNSLTVDNNVNDEPDNGTIQLDKPVGSTGSEDQNQGSGGTAGVKEVQ 143

Query: 595 WSAFGTDGAQDSFN--ADEPDFFNGFGDG-VDQMGKGGNLLAT 714
           WS+FG+D  ++S N    +P FFN F +G VDQ+GK  + +++
Sbjct: 144 WSSFGSDSVENSDNVFGADPGFFNEFDNGSVDQIGKEDSFISS 186


>ref|XP_021977759.1| protein transport protein SEC16B homolog isoform X2 [Helianthus
           annuus]
          Length = 1389

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 7/97 (7%)
 Frame = +1

Query: 460 PSRLVSSNSFAFDCVNHQVVENGNVAKVGEEDLNYGSTG----GIKEVQWSAFGTDGAQD 627
           P+RLVSSNS     V+ +  +NG +    EE +N+  +     G+KEVQWS FG+   ++
Sbjct: 122 PNRLVSSNSVTLSSVSEEP-DNGGIRL--EEPMNFAESESQNHGVKEVQWSNFGSGSLEN 178

Query: 628 SFNA--DEPDFFNGFGDG-VDQMGKGGNLLATESANV 729
           +F+A   +PDFFN  GDG  DQ+GK    +  ES +V
Sbjct: 179 NFDAFGSDPDFFNELGDGSFDQIGKEDGFINGESNSV 215


>ref|XP_021977758.1| protein transport protein SEC16B homolog isoform X1 [Helianthus
           annuus]
 gb|OTG18857.1| putative ancestral coatomer element 1, Sec16/Sec31 [Helianthus
           annuus]
          Length = 1391

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 7/97 (7%)
 Frame = +1

Query: 460 PSRLVSSNSFAFDCVNHQVVENGNVAKVGEEDLNYGSTG----GIKEVQWSAFGTDGAQD 627
           P+RLVSSNS     V+ +  +NG +    EE +N+  +     G+KEVQWS FG+   ++
Sbjct: 122 PNRLVSSNSVTLSSVSEEP-DNGGIRL--EEPMNFAESESQNHGVKEVQWSNFGSGSLEN 178

Query: 628 SFNA--DEPDFFNGFGDG-VDQMGKGGNLLATESANV 729
           +F+A   +PDFFN  GDG  DQ+GK    +  ES +V
Sbjct: 179 NFDAFGSDPDFFNELGDGSFDQIGKEDGFINGESNSV 215


>gb|KVH91941.1| COPII coat assembly protein, Sec16 [Cynara cardunculus var.
           scolymus]
          Length = 1458

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 39/96 (40%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
 Frame = +1

Query: 469 LVSSNSFAFDCVNHQVVENGNVAKVGEEDLN------YGSTGGIKEVQWSAFGTDGAQDS 630
           LVSSNSFAFD VN++   N  +    + D         G   G+KEVQWSAF  +   DS
Sbjct: 150 LVSSNSFAFDNVNNE--PNNGIGMAEQLDSTASGYHGIGGASGVKEVQWSAFTAEPLDDS 207

Query: 631 FN--ADEPDFFNGFGDG-VDQMGKGGNLLATESANV 729
            N      DFF  FGD  VDQ  KG + + +E  ++
Sbjct: 208 NNGFGSYSDFFTDFGDNFVDQTRKGDSFVNSEPNSI 243


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