BLASTX nr result

ID: Chrysanthemum21_contig00002130 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00002130
         (527 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY66752.1| hypothetical protein LSAT_8X52220 [Lactuca sativa]      91   1e-19
gb|PLY63052.1| hypothetical protein LSAT_8X51601 [Lactuca sativa]      89   7e-19
gb|PLY66761.1| hypothetical protein LSAT_8X52240 [Lactuca sativa]      82   1e-15
ref|XP_023747884.1| DNA-directed RNA polymerase II subunit RPB1-...    65   3e-09
gb|PLY63076.1| hypothetical protein LSAT_8X51661 [Lactuca sativa]      65   3e-09
ref|XP_021974386.1| DNA-directed RNA polymerase II subunit RPB1-...    65   4e-09
gb|PLY66766.1| hypothetical protein LSAT_8X52260 [Lactuca sativa]      60   2e-08

>gb|PLY66752.1| hypothetical protein LSAT_8X52220 [Lactuca sativa]
          Length = 203

 Score = 91.3 bits (225), Expect = 1e-19
 Identities = 44/65 (67%), Positives = 53/65 (81%)
 Frame = +2

Query: 2   PLSNPTNNINEALGLLEESVYYSPRADPRRRGVLDDLSTRAQPTEPQRRYARPAFVSKHN 181
           P++  TNNINEALG LE S+ +SPR+DPR+RGVLD+LS RAQP EPQ+RYARP FV+K N
Sbjct: 138 PITTSTNNINEALGFLE-SMTHSPRSDPRQRGVLDELSIRAQPVEPQKRYARPTFVAKPN 196

Query: 182 DARHN 196
           D   N
Sbjct: 197 DVYRN 201


>gb|PLY63052.1| hypothetical protein LSAT_8X51601 [Lactuca sativa]
          Length = 204

 Score = 89.4 bits (220), Expect = 7e-19
 Identities = 44/65 (67%), Positives = 55/65 (84%)
 Frame = +2

Query: 5   LSNPTNNINEALGLLEESVYYSPRADPRRRGVLDDLSTRAQPTEPQRRYARPAFVSKHND 184
           LS   +NINEALGLLE S+ +SPR+DPR++GVLD+LSTRAQPTEPQ+RYARPAFV+K +D
Sbjct: 140 LSTKIDNINEALGLLE-SMKHSPRSDPRQKGVLDELSTRAQPTEPQKRYARPAFVAKTSD 198

Query: 185 ARHNF 199
               +
Sbjct: 199 VYRKY 203


>gb|PLY66761.1| hypothetical protein LSAT_8X52240 [Lactuca sativa]
          Length = 234

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 41/61 (67%), Positives = 48/61 (78%)
 Frame = +2

Query: 2   PLSNPTNNINEALGLLEESVYYSPRADPRRRGVLDDLSTRAQPTEPQRRYARPAFVSKHN 181
           PLS  TNNINEALG LE  V +S R++PR+RGVLD+LS R QP EPQ+RY RPAFV+K  
Sbjct: 169 PLSTSTNNINEALGFLEH-VNHSSRSEPRQRGVLDELSLRPQPLEPQKRYPRPAFVAKRY 227

Query: 182 D 184
           D
Sbjct: 228 D 228


>ref|XP_023747884.1| DNA-directed RNA polymerase II subunit RPB1-like [Lactuca sativa]
          Length = 568

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 36/86 (41%), Positives = 47/86 (54%)
 Frame = +2

Query: 2   PLSNPTNNINEALGLLEESVYYSPRADPRRRGVLDDLSTRAQPTEPQRRYARPAFVSKHN 181
           PL+  TN+INEAL  L ESV +S R+ P + G   +     QP EP RR ARP  +    
Sbjct: 485 PLTTTTNDINEALSFLTESVSFSSRSGPTQTGGARNFDFHTQPIEPVRRNARPGLMG--T 542

Query: 182 DARHNFNTTAVDSYEATRRY*GSLVP 259
             + +F    +DS EA R+Y G  VP
Sbjct: 543 TTQTSFGANTIDSREAMRKYNGVFVP 568


>gb|PLY63076.1| hypothetical protein LSAT_8X51661 [Lactuca sativa]
          Length = 578

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 36/86 (41%), Positives = 47/86 (54%)
 Frame = +2

Query: 2   PLSNPTNNINEALGLLEESVYYSPRADPRRRGVLDDLSTRAQPTEPQRRYARPAFVSKHN 181
           PL+  TN+INEAL  L ESV +S R+ P + G   +     QP EP RR ARP  +    
Sbjct: 495 PLTTTTNDINEALSFLTESVSFSSRSGPTQTGGARNFDFHTQPIEPVRRNARPGLMG--T 552

Query: 182 DARHNFNTTAVDSYEATRRY*GSLVP 259
             + +F    +DS EA R+Y G  VP
Sbjct: 553 TTQTSFGANTIDSREAMRKYNGVFVP 578


>ref|XP_021974386.1| DNA-directed RNA polymerase II subunit RPB1-like [Helianthus
           annuus]
 gb|OTG17312.1| hypothetical protein HannXRQ_Chr08g0210581 [Helianthus annuus]
          Length = 426

 Score = 65.1 bits (157), Expect = 4e-09
 Identities = 40/86 (46%), Positives = 48/86 (55%)
 Frame = +2

Query: 2   PLSNPTNNINEALGLLEESVYYSPRADPRRRGVLDDLSTRAQPTEPQRRYARPAFVSKHN 181
           PL+  TNNI+EALG L ES  YSPR+   R G  D+LS RAQP E  R Y R        
Sbjct: 358 PLTTSTNNIDEALGFLIES--YSPRSHLTREGPYDNLSPRAQPNEHNRPYLR-------- 407

Query: 182 DARHNFNTTAVDSYEATRRY*GSLVP 259
                  +  +DS+EA RRY G+ VP
Sbjct: 408 -------SNTIDSHEAVRRYNGAYVP 426


>gb|PLY66766.1| hypothetical protein LSAT_8X52260 [Lactuca sativa]
          Length = 146

 Score = 60.5 bits (145), Expect = 2e-08
 Identities = 32/61 (52%), Positives = 42/61 (68%)
 Frame = +2

Query: 2   PLSNPTNNINEALGLLEESVYYSPRADPRRRGVLDDLSTRAQPTEPQRRYARPAFVSKHN 181
           PL+  T+NI E  G  ++SV +SP  D  +R VLD+LSTRAQ  E ++RY RP FV+K N
Sbjct: 78  PLTTLTDNIKEPSGF-QDSVNHSPLLDLHQREVLDELSTRAQLLETEKRYGRPTFVAKPN 136

Query: 182 D 184
           D
Sbjct: 137 D 137


Top