BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00001862
         (1236 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF95196.1| replicase [Chrysanthemum virus B]                     783   0.0  
emb|CAO78682.1| polyprotein [Chrysanthemum virus B]                   607   0.0  
emb|CAK54344.1| polyprotein, partial [Chrysanthemum virus B]          603   0.0  
gb|AKZ66614.1| replicase [Atractylodes mottle virus]                  593   0.0  
ref|YP_001086452.2| polyprotein [Chrysanthemum virus B] >gi|1547...   583   0.0  
emb|CAK97712.1| polyprotein, partial [Chrysanthemum virus B]          579   0.0  
emb|CAO78694.1| polyprotein [Chrysanthemum virus B]                   555   e-178
emb|CAK54345.1| polyprotein, partial [Chrysanthemum virus B]          551   e-177
emb|CAK54342.1| polyprotein, partial [Chrysanthemum virus B]          551   e-176
emb|CAO78688.1| polyprotein [Chrysanthemum virus B]                   551   e-176
emb|CAK54343.1| polyprotein, partial [Chrysanthemum virus B]          547   e-175
ref|YP_001552317.1| replicase [Phlox virus B] >gi|157932100|gb|A...   526   e-167
ref|YP_009022064.1| replicase [Gaillardia latent virus] >gi|6011...   505   e-160
ref|YP_001165301.1| replicase [Phlox virus S] >gi|145206988|gb|A...   504   e-159
ref|YP_009288956.1| replicase [Ligustrum virus A] >gi|1064270261...   491   e-155
ref|YP_595727.1| replicase [Daphne virus S] >gi|58415290|emb|CAF...   479   e-150
dbj|BAU20378.1| replicase [Daphne virus S]                            479   e-150
gb|AFI61525.1| putative viral replicase [American hop latent virus]   469   e-147
ref|YP_006297586.1| unnamed protein product [American hop latent...   466   e-146
gb|AVN98095.1| replicase [Chrysanthemum virus R]                      466   e-145

>dbj|BAF95196.1| replicase [Chrysanthemum virus B]
          Length = 2094

 Score =  783 bits (2023), Expect = 0.0
 Identities = 386/393 (98%), Positives = 392/393 (99%)
 Frame = -1

Query: 1179 MSLTYRSPLEENVGAYDSSVQAAIASTSANYYKEAEVNNFQFFNYYLRPNAKRHLIEAGI 1000
            MSLTYRSPLEENVGAYDSSVQAAIASTSANYY+EAEVNNFQFFNYYLRP AKRHLIEAGI
Sbjct: 1    MSLTYRSPLEENVGAYDSSVQAAIASTSANYYREAEVNNFQFFNYYLRPIAKRHLIEAGI 60

Query: 999  YLSPYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISK 820
            YLSPYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISK
Sbjct: 61   YLSPYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISK 120

Query: 819  INRFVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPSLKEREAKYLFLHDE 640
            INRFVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPSLKEREAKYLFLHDE
Sbjct: 121  INRFVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPSLKEREAKYLFLHDE 180

Query: 639  IHYWDPKQLITFLEVIKPEVVYATLVYPPEILSGATMSLHKWCYTFKIVGKDLLFYPDGV 460
            IHYWDPKQLITFLEVI+PEVVYATLVYPPEILSGATMSLHKWCYTFKIVGKDLLFYPDGV
Sbjct: 181  IHYWDPKQLITFLEVIRPEVVYATLVYPPEILSGATMSLHKWCYTFKIVGKDLLFYPDGV 240

Query: 459  LSEGYQQKIKNGYLLKARKIVLPNGDVYMVDLIHSKFAHHLISITRGELLSTDIRSFGPF 280
            LSEGYQQKIKNGYLLKAR+IVLPNGDVYMVDLIHSKFAHHLISITRGELLSTDIRSFGPF
Sbjct: 241  LSEGYQQKIKNGYLLKARRIVLPNGDVYMVDLIHSKFAHHLISITRGELLSTDIRSFGPF 300

Query: 279  EATACNGLEPLVRNMSNCFPVPYSVVSRTYLYLSTLRKPDVQSSMAKLRQLVEEPTGIEM 100
            EATAC+GLEPLVRNMSNCFPVPYSVVSRTYLYLSTLRKPD+QSSMAKLRQLV+EPTGIEM
Sbjct: 301  EATACSGLEPLVRNMSNCFPVPYSVVSRTYLYLSTLRKPDIQSSMAKLRQLVDEPTGIEM 360

Query: 99   KFVKDFAALVISASDIQTMICPQRVKLFFGRWC 1
            KFVKDFAALVISASDIQTMICPQRVKLFFGRWC
Sbjct: 361  KFVKDFAALVISASDIQTMICPQRVKLFFGRWC 393


>emb|CAO78682.1| polyprotein [Chrysanthemum virus B]
          Length = 2079

 Score =  607 bits (1565), Expect = 0.0
 Identities = 294/392 (75%), Positives = 339/392 (86%)
 Frame = -1

Query: 1179 MSLTYRSPLEENVGAYDSSVQAAIASTSANYYKEAEVNNFQFFNYYLRPNAKRHLIEAGI 1000
            M+LTYRSP+EENVGAYDSSVQAAIASTSANY++EAEV+NFQFFNYYLRP AKRHLIEAGI
Sbjct: 1    MALTYRSPMEENVGAYDSSVQAAIASTSANYHREAEVSNFQFFNYYLRPIAKRHLIEAGI 60

Query: 999  YLSPYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISK 820
            YLSPYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISK
Sbjct: 61   YLSPYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISK 120

Query: 819  INRFVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPSLKEREAKYLFLHDE 640
            INRFVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLP LKEREAKYLFLHDE
Sbjct: 121  INRFVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPCLKEREAKYLFLHDE 180

Query: 639  IHYWDPKQLITFLEVIKPEVVYATLVYPPEILSGATMSLHKWCYTFKIVGKDLLFYPDGV 460
            +HYW  + LI+ LEV++PE++  T+VYPPE+L G+  SL+ WCY +++  K+ LFYPDGV
Sbjct: 181  LHYWSKEDLISLLEVLQPEMMLGTMVYPPELLFGSNRSLNPWCYAYEVKKKNFLFYPDGV 240

Query: 459  LSEGYQQKIKNGYLLKARKIVLPNGDVYMVDLIHSKFAHHLISITRGELLSTDIRSFGPF 280
             SEGY+Q +  GYLL+  KI L  G VY VD++ SKFAHHL+SITRGE     +RSFGPF
Sbjct: 241  RSEGYEQPLNGGYLLECGKITLVGGTVYKVDILCSKFAHHLVSITRGEAAGPTMRSFGPF 300

Query: 279  EATACNGLEPLVRNMSNCFPVPYSVVSRTYLYLSTLRKPDVQSSMAKLRQLVEEPTGIEM 100
            EATACNGL+PL R++S  FP+PY VVS+ Y YL TLRKPD QSSMAKL QL+  PTG E+
Sbjct: 301  EATACNGLDPLTRDVSCSFPIPYEVVSKVYRYLKTLRKPDEQSSMAKLTQLLPCPTGEEI 360

Query: 99   KFVKDFAALVISASDIQTMICPQRVKLFFGRW 4
             FV++F+ LVI+ + ++TMI   R+K+F G++
Sbjct: 361  VFVQEFSNLVIATNTVKTMISADRLKIFMGKY 392


>emb|CAK54344.1| polyprotein, partial [Chrysanthemum virus B]
          Length = 2076

 Score =  603 bits (1555), Expect = 0.0
 Identities = 292/389 (75%), Positives = 336/389 (86%)
 Frame = -1

Query: 1170 TYRSPLEENVGAYDSSVQAAIASTSANYYKEAEVNNFQFFNYYLRPNAKRHLIEAGIYLS 991
            TYRSP+EENVGAYDSSVQAAIASTSANY++EAEV+NFQFFNYYLRP AKRHLIEAGIYLS
Sbjct: 1    TYRSPMEENVGAYDSSVQAAIASTSANYHREAEVSNFQFFNYYLRPIAKRHLIEAGIYLS 60

Query: 990  PYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISKINR 811
            PYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISKINR
Sbjct: 61   PYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISKINR 120

Query: 810  FVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPSLKEREAKYLFLHDEIHY 631
            FVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLP LKEREAKYLFLHDE+HY
Sbjct: 121  FVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPCLKEREAKYLFLHDELHY 180

Query: 630  WDPKQLITFLEVIKPEVVYATLVYPPEILSGATMSLHKWCYTFKIVGKDLLFYPDGVLSE 451
            W  + LI+ LEV++PE++  T+VYPPE+L G+  SL+ WCY +++  K+ LFYPDGV SE
Sbjct: 181  WSKEDLISLLEVLQPEMMLGTMVYPPELLFGSNRSLNPWCYAYEVKKKNFLFYPDGVRSE 240

Query: 450  GYQQKIKNGYLLKARKIVLPNGDVYMVDLIHSKFAHHLISITRGELLSTDIRSFGPFEAT 271
            GY+Q +  GYLL+  KI L  G VY VD++ SKFAHHL+SITRGE     +RSFGPFEAT
Sbjct: 241  GYEQPLNGGYLLECGKITLVGGTVYKVDILCSKFAHHLVSITRGEAAGPTMRSFGPFEAT 300

Query: 270  ACNGLEPLVRNMSNCFPVPYSVVSRTYLYLSTLRKPDVQSSMAKLRQLVEEPTGIEMKFV 91
            ACNGL+PL R++S  FP+PY VVS+ Y YL TLRKPD QSSMAKL QL+  PTG E+ FV
Sbjct: 301  ACNGLDPLTRDVSCSFPIPYEVVSKVYRYLKTLRKPDEQSSMAKLTQLLPCPTGEEIVFV 360

Query: 90   KDFAALVISASDIQTMICPQRVKLFFGRW 4
            ++F+ LVI+ + ++TMI   R+K+F G++
Sbjct: 361  QEFSNLVIATNTVKTMISADRLKIFMGKY 389


>gb|AKZ66614.1| replicase [Atractylodes mottle virus]
          Length = 2036

 Score =  593 bits (1528), Expect = 0.0
 Identities = 280/392 (71%), Positives = 338/392 (86%)
 Frame = -1

Query: 1179 MSLTYRSPLEENVGAYDSSVQAAIASTSANYYKEAEVNNFQFFNYYLRPNAKRHLIEAGI 1000
            MSLTYRSPLEEN+GAYDS+VQAAIASTSAN+Y+EAE  NFQ+FN++LRP AK+HLIEAGI
Sbjct: 1    MSLTYRSPLEENLGAYDSTVQAAIASTSANHYREAEAANFQYFNFHLRPEAKKHLIEAGI 60

Query: 999  YLSPYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISK 820
            YLSP+SAVPHSH ACKTLENHLLYNVLP L+DNRF+FVGIK  KL+ LK RNS LSTIS+
Sbjct: 61   YLSPFSAVPHSHPACKTLENHLLYNVLPKLIDNRFYFVGIKNHKLDLLKTRNSSLSTISQ 120

Query: 819  INRFVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPSLKEREAKYLFLHDE 640
            INR+VTSADKARYGSD V+  S  HV   RH+ ++  PTL++L+P L+     YLFLHDE
Sbjct: 121  INRYVTSADKARYGSDLVRVSSDEHVCIARHKFELSKPTLQELVPRLQLVNHDYLFLHDE 180

Query: 639  IHYWDPKQLITFLEVIKPEVVYATLVYPPEILSGATMSLHKWCYTFKIVGKDLLFYPDGV 460
            +HYW PK LITFLEV+KP+V+YATLVYPPE+L+G+  SL+KWCYTFK+  +DLLFYPDGV
Sbjct: 181  LHYWSPKALITFLEVLKPKVMYATLVYPPELLAGSKYSLNKWCYTFKVFRRDLLFYPDGV 240

Query: 459  LSEGYQQKIKNGYLLKARKIVLPNGDVYMVDLIHSKFAHHLISITRGELLSTDIRSFGPF 280
            + EGYQQ +K GYLL+A KI+L NGDVYMVD+IHSKFAHHL+SITRGEL +  +RSFGPF
Sbjct: 241  MCEGYQQPLKGGYLLRANKIILNNGDVYMVDVIHSKFAHHLVSITRGELAANTVRSFGPF 300

Query: 279  EATACNGLEPLVRNMSNCFPVPYSVVSRTYLYLSTLRKPDVQSSMAKLRQLVEEPTGIEM 100
            EAT+  GLEPL+RN+ +CFPV YSVVS+ Y YL+TL+KPD QS+MAKL QL+EEP+G+EM
Sbjct: 301  EATSTRGLEPLLRNVQHCFPVSYSVVSKIYRYLNTLKKPDAQSAMAKLSQLLEEPSGLEM 360

Query: 99   KFVKDFAALVISASDIQTMICPQRVKLFFGRW 4
            KF+KDFA LVI+ S I TMI P+R+++FFG+W
Sbjct: 361  KFLKDFANLVINTSGINTMIKPERLRMFFGKW 392


>ref|YP_001086452.2| polyprotein [Chrysanthemum virus B]
 emb|CAM35753.2| polyprotein [Chrysanthemum virus B]
          Length = 2082

 Score =  583 bits (1503), Expect = 0.0
 Identities = 283/365 (77%), Positives = 320/365 (87%)
 Frame = -1

Query: 1179 MSLTYRSPLEENVGAYDSSVQAAIASTSANYYKEAEVNNFQFFNYYLRPNAKRHLIEAGI 1000
            M+LTYRSP+EENVGAYDSSVQAAIASTSANY++EAEV+NFQFFNYYLRP AKRHLIEAGI
Sbjct: 1    MALTYRSPMEENVGAYDSSVQAAIASTSANYHREAEVSNFQFFNYYLRPIAKRHLIEAGI 60

Query: 999  YLSPYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISK 820
            YLSPYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISK
Sbjct: 61   YLSPYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISK 120

Query: 819  INRFVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPSLKEREAKYLFLHDE 640
            INRFVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLP LKEREAKYLFLHDE
Sbjct: 121  INRFVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPCLKEREAKYLFLHDE 180

Query: 639  IHYWDPKQLITFLEVIKPEVVYATLVYPPEILSGATMSLHKWCYTFKIVGKDLLFYPDGV 460
            +HYW  + LI+ LEV++PE++  T+VYPPE+L G+  SL+ WCY +++  K+ LFYPDGV
Sbjct: 181  LHYWSKEDLISLLEVLQPEMMLGTMVYPPELLFGSNRSLNPWCYAYEVKKKNFLFYPDGV 240

Query: 459  LSEGYQQKIKNGYLLKARKIVLPNGDVYMVDLIHSKFAHHLISITRGELLSTDIRSFGPF 280
             SEGY+Q +  GYLL+  KI L +G VY VD++ SKFAHHL+SITRGE     +RSFGPF
Sbjct: 241  RSEGYEQPLNGGYLLECGKITLVDGTVYKVDILCSKFAHHLVSITRGEAAGPTMRSFGPF 300

Query: 279  EATACNGLEPLVRNMSNCFPVPYSVVSRTYLYLSTLRKPDVQSSMAKLRQLVEEPTGIEM 100
            EATACNGL+PL R++S  FP+PY VVS+ Y YL TLRKPD QSSMAKL QL+  PTG E+
Sbjct: 301  EATACNGLDPLTRDVSCSFPIPYEVVSKVYRYLKTLRKPDEQSSMAKLTQLLPCPTGEEI 360

Query: 99   KFVKD 85
             FV++
Sbjct: 361  VFVQE 365


>emb|CAK97712.1| polyprotein, partial [Chrysanthemum virus B]
          Length = 2079

 Score =  579 bits (1493), Expect = 0.0
 Identities = 281/362 (77%), Positives = 317/362 (87%)
 Frame = -1

Query: 1170 TYRSPLEENVGAYDSSVQAAIASTSANYYKEAEVNNFQFFNYYLRPNAKRHLIEAGIYLS 991
            TYRSP+EENVGAYDSSVQAAIASTSANY++EAEV+NFQFFNYYLRP AKRHLIEAGIYLS
Sbjct: 1    TYRSPMEENVGAYDSSVQAAIASTSANYHREAEVSNFQFFNYYLRPIAKRHLIEAGIYLS 60

Query: 990  PYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISKINR 811
            PYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISKINR
Sbjct: 61   PYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISKINR 120

Query: 810  FVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPSLKEREAKYLFLHDEIHY 631
            FVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLP LKEREAKYLFLHDE+HY
Sbjct: 121  FVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPCLKEREAKYLFLHDELHY 180

Query: 630  WDPKQLITFLEVIKPEVVYATLVYPPEILSGATMSLHKWCYTFKIVGKDLLFYPDGVLSE 451
            W  + LI+ LEV++PE++  T+VYPPE+L G+  SL+ WCY +++  K+ LFYPDGV SE
Sbjct: 181  WSKEDLISLLEVLQPEMMLGTMVYPPELLFGSNRSLNPWCYAYEVKKKNFLFYPDGVRSE 240

Query: 450  GYQQKIKNGYLLKARKIVLPNGDVYMVDLIHSKFAHHLISITRGELLSTDIRSFGPFEAT 271
            GY+Q +  GYLL+  KI L +G VY VD++ SKFAHHL+SITRGE     +RSFGPFEAT
Sbjct: 241  GYEQPLNGGYLLECGKITLVDGTVYKVDILCSKFAHHLVSITRGEAAGPTMRSFGPFEAT 300

Query: 270  ACNGLEPLVRNMSNCFPVPYSVVSRTYLYLSTLRKPDVQSSMAKLRQLVEEPTGIEMKFV 91
            ACNGL+PL R++S  FP+PY VVS+ Y YL TLRKPD QSSMAKL QL+  PTG E+ FV
Sbjct: 301  ACNGLDPLTRDVSCSFPIPYEVVSKVYRYLKTLRKPDEQSSMAKLTQLLPCPTGEEIVFV 360

Query: 90   KD 85
            ++
Sbjct: 361  QE 362


>emb|CAO78694.1| polyprotein [Chrysanthemum virus B]
          Length = 2079

 Score =  555 bits (1430), Expect = e-178
 Identities = 275/366 (75%), Positives = 312/366 (85%), Gaps = 1/366 (0%)
 Frame = -1

Query: 1179 MSLTYRSPLEENVGAYDSSVQAAIASTSANYYKEAEVNNFQFFNYYLRPNAKRHLIEAGI 1000
            M+LTYRSP+EENVGAYDSSVQAAIASTSANYYKEAEVNNFQFFN+YLRP AKRHLIEAGI
Sbjct: 1    MALTYRSPMEENVGAYDSSVQAAIASTSANYYKEAEVNNFQFFNHYLRPIAKRHLIEAGI 60

Query: 999  YLSPYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISK 820
            YLSPYSAVPHSHAACKTLENHLLYNVLPPLVDNRF+FVGIKQSKLEFLKLRNSKLS ISK
Sbjct: 61   YLSPYSAVPHSHAACKTLENHLLYNVLPPLVDNRFYFVGIKQSKLEFLKLRNSKLSAISK 120

Query: 819  INRFVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPSLKEREAKYLFLHDE 640
            INRFVTSADKARYGSDFVKKVSKPH GFKRHELQVETPTLRDLLPSLKEREAKYLFLHDE
Sbjct: 121  INRFVTSADKARYGSDFVKKVSKPHAGFKRHELQVETPTLRDLLPSLKEREAKYLFLHDE 180

Query: 639  IHYWDPKQLITFLEVIKPEVVYATLVYPPEILSGATMSLHKWCYTFKIVGKDLLFYPDGV 460
            +HYW  + LI+ LEV++PE++  T+VYPPE+L G+  SL+ WCY +++  K+ LFYPDGV
Sbjct: 181  LHYWSKEDLISLLEVLQPEMMLGTMVYPPELLFGSNRSLNPWCYAYEVKKKNFLFYPDGV 240

Query: 459  LSEGYQQKIKNGYLLKARKIVLPNGDVYMVDLIHSKFAHHLISITRGELLSTDIRSFGPF 280
             SEG++Q +  GYLL+  KI L +G VY VD++ SKFAHHL+SITRGE     +RSFGPF
Sbjct: 241  RSEGHEQPLNGGYLLECGKITLVDGTVYKVDILCSKFAHHLVSITRGEAAGPTMRSFGPF 300

Query: 279  EATACNGL-EPLVRNMSNCFPVPYSVVSRTYLYLSTLRKPDVQSSMAKLRQLVEEPTGIE 103
                 +GL  P  R++S  FP+PY VVS+ Y YL TLRKPD QSSMAKL QL+  PTG E
Sbjct: 301  N-NGVHGLGSPHTRDVSCSFPIPYEVVSKVYRYLKTLRKPDEQSSMAKLTQLLPCPTGEE 359

Query: 102  MKFVKD 85
            + FV++
Sbjct: 360  IVFVQE 365


>emb|CAK54345.1| polyprotein, partial [Chrysanthemum virus B]
          Length = 2075

 Score =  551 bits (1421), Expect = e-177
 Identities = 274/363 (75%), Positives = 309/363 (85%), Gaps = 1/363 (0%)
 Frame = -1

Query: 1170 TYRSPLEENVGAYDSSVQAAIASTSANYYKEAEVNNFQFFNYYLRPNAKRHLIEAGIYLS 991
            TYRSP+EENVGAYDSSVQAAIASTSANYY+EAEVNNFQFFNYYLRP AKRHLIEAGIYLS
Sbjct: 1    TYRSPMEENVGAYDSSVQAAIASTSANYYREAEVNNFQFFNYYLRPIAKRHLIEAGIYLS 60

Query: 990  PYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISKINR 811
            PYSAVPHSHAACKTLEN LLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISKINR
Sbjct: 61   PYSAVPHSHAACKTLENLLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISKINR 120

Query: 810  FVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPSLKEREAKYLFLHDEIHY 631
            FVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLP LKEREAKYLFLHDE+HY
Sbjct: 121  FVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPCLKEREAKYLFLHDELHY 180

Query: 630  WDPKQLITFLEVIKPEVVYATLVYPPEILSGATMSLHKWCYTFKIVGKDLLFYPDGVLSE 451
            W  + LI+ LEV++PE++  T+VYPPE+L G+  SL+ WCY +++  K+ LFYPDGV SE
Sbjct: 181  WSKEDLISLLEVLQPEMMLGTMVYPPELLFGSNRSLNPWCYAYEVKKKNFLFYPDGVRSE 240

Query: 450  GYQQKIKNGYLLKARKIVLPNGDVYMVDLIHSKFAHHLISITRGELLSTDIRSFGPFEAT 271
            G++Q +  GYLL+  KI L +G VY VD++ SKFAHHL+SITRGE     +RSFGPF   
Sbjct: 241  GHEQPLNGGYLLECGKITLVDGTVYKVDILCSKFAHHLVSITRGEAAGPTMRSFGPFN-N 299

Query: 270  ACNGL-EPLVRNMSNCFPVPYSVVSRTYLYLSTLRKPDVQSSMAKLRQLVEEPTGIEMKF 94
              +GL  P  R++S  FP+PY VVS+ Y YL TLRKPD QSSMAKL QL+  PTG E+ F
Sbjct: 300  GVHGLGSPHTRDVSCSFPIPYEVVSKVYRYLKTLRKPDEQSSMAKLTQLLPCPTGEEIVF 359

Query: 93   VKD 85
            V++
Sbjct: 360  VQE 362


>emb|CAK54342.1| polyprotein, partial [Chrysanthemum virus B]
          Length = 2076

 Score =  551 bits (1420), Expect = e-176
 Identities = 273/363 (75%), Positives = 309/363 (85%), Gaps = 1/363 (0%)
 Frame = -1

Query: 1170 TYRSPLEENVGAYDSSVQAAIASTSANYYKEAEVNNFQFFNYYLRPNAKRHLIEAGIYLS 991
            TYRSP+EENVGAYDSSVQAAIASTSANYYKEAEVNNFQFFN+YLRP AKRHLIEAGIYLS
Sbjct: 1    TYRSPMEENVGAYDSSVQAAIASTSANYYKEAEVNNFQFFNHYLRPIAKRHLIEAGIYLS 60

Query: 990  PYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISKINR 811
            PYSAVPHSHAACKTLENHLLYNVLPPLVDNRF+FVGIKQSKLEFLKLRNSKLS ISKINR
Sbjct: 61   PYSAVPHSHAACKTLENHLLYNVLPPLVDNRFYFVGIKQSKLEFLKLRNSKLSAISKINR 120

Query: 810  FVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPSLKEREAKYLFLHDEIHY 631
            FVTSADKARYGSDFVKKVSKPH GFKRHELQVETPTLRDLLPSLKEREAKYLFLHDE+HY
Sbjct: 121  FVTSADKARYGSDFVKKVSKPHAGFKRHELQVETPTLRDLLPSLKEREAKYLFLHDELHY 180

Query: 630  WDPKQLITFLEVIKPEVVYATLVYPPEILSGATMSLHKWCYTFKIVGKDLLFYPDGVLSE 451
            W  + LI+ LEV++PE++  T+VYPPE+L G+  SL+ WCY +++  K+ LFYPDGV SE
Sbjct: 181  WSKEDLISLLEVLQPEMMLGTMVYPPELLFGSNRSLNPWCYAYEVKKKNFLFYPDGVRSE 240

Query: 450  GYQQKIKNGYLLKARKIVLPNGDVYMVDLIHSKFAHHLISITRGELLSTDIRSFGPFEAT 271
            G++Q +  GYLL+  KI L +G VY VD++ SKFAHHL+SITRGE     +RSFGPF   
Sbjct: 241  GHEQPLNGGYLLECGKITLVDGTVYKVDILCSKFAHHLVSITRGEAAGPTMRSFGPFN-N 299

Query: 270  ACNGL-EPLVRNMSNCFPVPYSVVSRTYLYLSTLRKPDVQSSMAKLRQLVEEPTGIEMKF 94
              +GL  P  R++S  FP+PY VVS+ Y YL TLRKPD QSSMAKL QL+  PTG E+ F
Sbjct: 300  GVHGLGSPHTRDVSCSFPIPYEVVSKVYRYLKTLRKPDEQSSMAKLTQLLPCPTGEEIVF 359

Query: 93   VKD 85
            V++
Sbjct: 360  VQE 362


>emb|CAO78688.1| polyprotein [Chrysanthemum virus B]
          Length = 2078

 Score =  551 bits (1419), Expect = e-176
 Identities = 273/366 (74%), Positives = 312/366 (85%), Gaps = 1/366 (0%)
 Frame = -1

Query: 1179 MSLTYRSPLEENVGAYDSSVQAAIASTSANYYKEAEVNNFQFFNYYLRPNAKRHLIEAGI 1000
            M+LTYRSP+EENVGAYDSSVQAAIASTSANYY+EAEV+NFQFFNYYLRP  KRH+IEAGI
Sbjct: 1    MALTYRSPMEENVGAYDSSVQAAIASTSANYYREAEVSNFQFFNYYLRPIGKRHIIEAGI 60

Query: 999  YLSPYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISK 820
            YLSPYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISK
Sbjct: 61   YLSPYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISK 120

Query: 819  INRFVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPSLKEREAKYLFLHDE 640
            INRFVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLP LKEREAKYLFLHDE
Sbjct: 121  INRFVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPCLKEREAKYLFLHDE 180

Query: 639  IHYWDPKQLITFLEVIKPEVVYATLVYPPEILSGATMSLHKWCYTFKIVGKDLLFYPDGV 460
            +HY + + LI+ LEV++PE++  T+VYPPE+L G+  SL+ WCY +++  K+ LFYPDGV
Sbjct: 181  LHYLNKEDLISLLEVLQPEMMLGTMVYPPELLFGSNRSLNPWCYAYEVKKKNFLFYPDGV 240

Query: 459  LSEGYQQKIKNGYLLKARKIVLPNGDVYMVDLIHSKFAHHLISITRGELLSTDIRSFGPF 280
             SEG++Q +  GYLL+  KI L +G VY VD++ SKFAHHL+SITRGE     +RSFGPF
Sbjct: 241  RSEGHEQPLNGGYLLECGKITLVDGTVYKVDILCSKFAHHLVSITRGEAAGPTMRSFGPF 300

Query: 279  EATACNGL-EPLVRNMSNCFPVPYSVVSRTYLYLSTLRKPDVQSSMAKLRQLVEEPTGIE 103
                 +GL  P  R++S  FP+PY VVS+ Y YL TLRKPD QSSMAKL QL+  PTG E
Sbjct: 301  N-NGVHGLGSPHTRDVSCSFPIPYEVVSKVYRYLKTLRKPDEQSSMAKLTQLLPCPTGEE 359

Query: 102  MKFVKD 85
            + FV++
Sbjct: 360  IVFVQE 365


>emb|CAK54343.1| polyprotein, partial [Chrysanthemum virus B]
          Length = 2075

 Score =  547 bits (1409), Expect = e-175
 Identities = 271/363 (74%), Positives = 309/363 (85%), Gaps = 1/363 (0%)
 Frame = -1

Query: 1170 TYRSPLEENVGAYDSSVQAAIASTSANYYKEAEVNNFQFFNYYLRPNAKRHLIEAGIYLS 991
            TYRSP+EENVGAYDSSVQAAIASTSANYY+EAEV+NFQFFNYYLRP  KRH+IEAGIYLS
Sbjct: 1    TYRSPMEENVGAYDSSVQAAIASTSANYYREAEVSNFQFFNYYLRPIGKRHIIEAGIYLS 60

Query: 990  PYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISKINR 811
            PYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISKINR
Sbjct: 61   PYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISKINR 120

Query: 810  FVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPSLKEREAKYLFLHDEIHY 631
            FVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLP LKEREAKYLFLHDE+HY
Sbjct: 121  FVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPCLKEREAKYLFLHDELHY 180

Query: 630  WDPKQLITFLEVIKPEVVYATLVYPPEILSGATMSLHKWCYTFKIVGKDLLFYPDGVLSE 451
             + + LI+ LEV++PE++  T+VYPPE+L G+  SL+ WCY +++  K+ LFYPDGV SE
Sbjct: 181  LNKEDLISLLEVLQPEMMLGTMVYPPELLFGSNRSLNPWCYAYEVKKKNFLFYPDGVRSE 240

Query: 450  GYQQKIKNGYLLKARKIVLPNGDVYMVDLIHSKFAHHLISITRGELLSTDIRSFGPFEAT 271
            G++Q +  GYLL+  KI L +G VY VD++ SKFAHHL+SITRGE     +RSFGPF   
Sbjct: 241  GHEQPLNGGYLLECGKITLVDGTVYKVDILCSKFAHHLVSITRGEAAGPTMRSFGPFN-N 299

Query: 270  ACNGL-EPLVRNMSNCFPVPYSVVSRTYLYLSTLRKPDVQSSMAKLRQLVEEPTGIEMKF 94
              +GL  P  R++S  FP+PY VVS+ Y YL TLRKPD QSSMAKL QL+  PTG E+ F
Sbjct: 300  GVHGLGSPHTRDVSCSFPIPYEVVSKVYRYLKTLRKPDEQSSMAKLTQLLPCPTGEEIVF 359

Query: 93   VKD 85
            V++
Sbjct: 360  VQE 362


>ref|YP_001552317.1| replicase [Phlox virus B]
 gb|ABW05092.1| replicase [Phlox virus B]
          Length = 2051

 Score =  526 bits (1356), Expect = e-167
 Identities = 242/392 (61%), Positives = 313/392 (79%)
 Frame = -1

Query: 1179 MSLTYRSPLEENVGAYDSSVQAAIASTSANYYKEAEVNNFQFFNYYLRPNAKRHLIEAGI 1000
            M+LTYRSPLEENV AYD+SVQ+ IASTSA YYK+ E + F+FFNY++ P AK+ LIEAG+
Sbjct: 1    MALTYRSPLEENVAAYDASVQSTIASTSACYYKDTEADKFRFFNYFVNPTAKKKLIEAGL 60

Query: 999  YLSPYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISK 820
            YLSPYSA+PHSH  CKTLEN+ L+ V+P  +DNRF FVGIK  KL  LK RN+ LST+ K
Sbjct: 61   YLSPYSAMPHSHPVCKTLENYFLFEVIPSKIDNRFFFVGIKNEKLSMLKARNTHLSTVEK 120

Query: 819  INRFVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPSLKEREAKYLFLHDE 640
            +NR+VTSADK RYGSDFV + ++   G  R    ++  TL+DL+P L  + AK+LF+HDE
Sbjct: 121  VNRYVTSADKVRYGSDFVVRPTEKIPGLIRQRPCLDGVTLKDLVPELMRKSAKHLFMHDE 180

Query: 639  IHYWDPKQLITFLEVIKPEVVYATLVYPPEILSGATMSLHKWCYTFKIVGKDLLFYPDGV 460
            IHYW  + LITFLEVI+PEV+YAT+VYPPE+L G+  SL KWCY F ++G D  FYPDGV
Sbjct: 181  IHYWSARDLITFLEVIQPEVMYATMVYPPELLVGSKFSLFKWCYEFDVIGNDFFFYPDGV 240

Query: 459  LSEGYQQKIKNGYLLKARKIVLPNGDVYMVDLIHSKFAHHLISITRGELLSTDIRSFGPF 280
             +EGY Q +KNGYLLKA++I+LP+G VY VD++ SKFAHHLI+ITRGE +  ++R+FGPF
Sbjct: 241  RTEGYLQPLKNGYLLKAKRILLPDGGVYHVDVVQSKFAHHLIAITRGESMGPNVRAFGPF 300

Query: 279  EATACNGLEPLVRNMSNCFPVPYSVVSRTYLYLSTLRKPDVQSSMAKLRQLVEEPTGIEM 100
            +AT C GLEPL  ++S+CFPV + VVSR Y YL TL+KPDVQS+MAKL QL+ EP+G+E+
Sbjct: 301  DATTCQGLEPLTSDVSHCFPVSFEVVSRVYRYLRTLKKPDVQSAMAKLSQLIPEPSGVEI 360

Query: 99   KFVKDFAALVISASDIQTMICPQRVKLFFGRW 4
            KF++DFA+L+IS + I++++CP R+ LF G W
Sbjct: 361  KFLQDFASLIISTNTIKSILCPSRLPLFLGGW 392


>ref|YP_009022064.1| replicase [Gaillardia latent virus]
 gb|AHN84511.1| replicase [Gaillardia latent virus]
          Length = 1990

 Score =  505 bits (1301), Expect = e-160
 Identities = 242/392 (61%), Positives = 312/392 (79%)
 Frame = -1

Query: 1179 MSLTYRSPLEENVGAYDSSVQAAIASTSANYYKEAEVNNFQFFNYYLRPNAKRHLIEAGI 1000
            M+LTYRSPLEENV AYDS+VQ+ IASTSA+YYKE E +NF+FFNY+L P AK+ LI +GI
Sbjct: 1    MALTYRSPLEENVAAYDSNVQSLIASTSAHYYKEEEESNFKFFNYHLTPVAKQKLITSGI 60

Query: 999  YLSPYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISK 820
            YLSP+SA+PHSH  CKTLEN+ LY V  PL+D+RF+FVGIK  K+  LK RNS LS +SK
Sbjct: 61   YLSPFSAMPHSHPVCKTLENYFLYIVAAPLLDSRFYFVGIKNHKINLLKTRNSDLSMVSK 120

Query: 819  INRFVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPSLKEREAKYLFLHDE 640
            INR+VTSADK RYGSDFV K         RH   +E  TL+DL+P+LKE +AK++FLHDE
Sbjct: 121  INRYVTSADKVRYGSDFVTKPIYTGECLARHRSCLEGATLKDLVPALKEGKAKHVFLHDE 180

Query: 639  IHYWDPKQLITFLEVIKPEVVYATLVYPPEILSGATMSLHKWCYTFKIVGKDLLFYPDGV 460
            +HYW P+ LITFLE++KPE++YATLVYP EIL+GA  SLH WCYTF+I+G  L+FYPDGV
Sbjct: 181  LHYWSPRDLITFLELVKPEIMYATLVYPAEILAGAAFSLHPWCYTFQIIGGKLIFYPDGV 240

Query: 459  LSEGYQQKIKNGYLLKARKIVLPNGDVYMVDLIHSKFAHHLISITRGELLSTDIRSFGPF 280
             +E Y+Q +  GYLL+A++I+  +  +YMVDL+ SKFAHHLI+ITR E LS + RSFGPF
Sbjct: 241  QTESYEQPLSCGYLLEAKRIITRH-SIYMVDLVQSKFAHHLIAITRTEALSPNYRSFGPF 299

Query: 279  EATACNGLEPLVRNMSNCFPVPYSVVSRTYLYLSTLRKPDVQSSMAKLRQLVEEPTGIEM 100
            +AT+ + L PL+R  +N  PV + +VSR Y YL TL+KPDVQS+MAKL QL++EP G+E+
Sbjct: 300  DATSSSALSPLMRTENNFIPVSFEIVSRVYRYLRTLKKPDVQSAMAKLSQLLQEPRGVEI 359

Query: 99   KFVKDFAALVISASDIQTMICPQRVKLFFGRW 4
            KF++DF++LVI+   ++++I P+ VKLF GRW
Sbjct: 360  KFIEDFSSLVINTGTVRSIIKPELVKLFLGRW 391


>ref|YP_001165301.1| replicase [Phlox virus S]
 gb|ABP37862.1| replicase [Phlox virus S]
          Length = 1990

 Score =  504 bits (1297), Expect = e-159
 Identities = 245/393 (62%), Positives = 310/393 (78%), Gaps = 1/393 (0%)
 Frame = -1

Query: 1179 MSLTYRSPLEENVGAYDSSVQAAIASTSANYYKEAEVNNFQFFNYYLRPNAKRHLIEAGI 1000
            M+LTYRSPLEENV AYD+SVQ+ IASTSA+YYK+ E NNFQFFNYYL P AK+ LI AG+
Sbjct: 1    MALTYRSPLEENVAAYDTSVQSLIASTSASYYKDFEANNFQFFNYYLNPVAKQKLITAGL 60

Query: 999  YLSPYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISK 820
            YLSPYSA+PHSH ACKTLEN+ LY V+ PL+DNRF F+GIK SK++ LK RNS LS I+K
Sbjct: 61   YLSPYSAMPHSHPACKTLENYFLYTVIAPLLDNRFFFIGIKNSKIDLLKSRNSNLSMINK 120

Query: 819  INRFVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPSLKEREAKYLFLHDE 640
            +NR+VTSAD+ RYGSDFV K         RHE  +E  TL+DL+P L E +AK++FLHDE
Sbjct: 121  LNRYVTSADRVRYGSDFVIKSIYMGEKLARHESCLEGATLKDLVPKLCEGKAKHIFLHDE 180

Query: 639  IHYWDPKQLITFLEVIKPEVVYATLVYPPEILSGATMSLHKWCYTFKIVGKDLLFYPDGV 460
            +HYW P+ LITFLE++KP+V+YATLVYP EIL GA+ SLH WCY F IVG  L+FYPDGV
Sbjct: 181  LHYWKPRDLITFLELVKPDVMYATLVYPAEILGGASFSLHPWCYKFNIVGGKLIFYPDGV 240

Query: 459  LSEGYQQKIKNGYLLKARKIVLPNGDVYMVDLIHSKFAHHLISITRGELLSTDIRSFGPF 280
             SE Y+Q + +G+LL+A+++V  +  +YMVD+I SKFAHHL+++TR + +    RSFGPF
Sbjct: 241  QSESYEQPLSSGFLLEAKRVVTKSA-IYMVDVIQSKFAHHLVALTRTDAIGPTYRSFGPF 299

Query: 279  EATACNGLEPLVRNMSNCF-PVPYSVVSRTYLYLSTLRKPDVQSSMAKLRQLVEEPTGIE 103
            +AT+   L PL+R  +NCF PV + V+SR Y YL TL+KPDVQS+MAKL QL++EP GIE
Sbjct: 300  DATSSTALNPLMRG-NNCFIPVSFEVLSRVYRYLRTLKKPDVQSAMAKLSQLLQEPKGIE 358

Query: 102  MKFVKDFAALVISASDIQTMICPQRVKLFFGRW 4
            +KFV+DFA LVI  + I+T+I P+ +K F GRW
Sbjct: 359  IKFVEDFARLVIGTNTIRTLIKPEVIKQFLGRW 391


>ref|YP_009288956.1| replicase [Ligustrum virus A]
 gb|AOO96599.1| replicase [Ligustrum virus A]
          Length = 1968

 Score =  491 bits (1265), Expect = e-155
 Identities = 240/393 (61%), Positives = 296/393 (75%), Gaps = 1/393 (0%)
 Frame = -1

Query: 1179 MSLTYRSPLEENVGAYDSSVQAAIASTSANYYKEAEVNNFQFFNYYLRPNAKRHLIEAGI 1000
            M+LTYRSP+EE V  Y+SSVQ++IAS SAN+YKE E  NFQ FNY+L P AKR L  AGI
Sbjct: 1    MALTYRSPMEEIVTCYESSVQSSIASASANFYKEVEAGNFQLFNYHLSPEAKRKLSIAGI 60

Query: 999  YLSPYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISK 820
            YLSP+SA+PHSH ACKTLEN++LY VLP  +DNRF FVGIKQ KLE LK R+  L  I+ 
Sbjct: 61   YLSPFSAMPHSHPACKTLENYILYKVLPSYLDNRFFFVGIKQFKLELLKKRDPNLDLITS 120

Query: 819  INRFVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPSLKEREAKYLFLHDE 640
            INR+VTSADK+RYGSDFV+  S   +G KRH   +   TLRDL P+L  R+ KY+FLHDE
Sbjct: 121  INRYVTSADKSRYGSDFVRLSSPEVLGLKRHASCLADSTLRDLAPALAARKGKYVFLHDE 180

Query: 639  IHYWDPKQLITFLEVIKPEVVYATLVYPPEILSGATMSLHKWCYTFKIVGKDLLFYPDGV 460
            IHYW  + L+TFLEV+ PE V AT+VYPPE+L GAT SLH WCYTF + GK L FYPDGV
Sbjct: 181  IHYWTTRDLLTFLEVLAPEQVLATMVYPPELLVGATSSLHSWCYTFDVQGKTLYFYPDGV 240

Query: 459  LSEGYQQKIKNGYLLKARKIVLPNGDVYMVDLIHSKFAHHLISITRGELLSTDIRSFGPF 280
             SEGY+Q ++ G+LL+ +K+ LP+G  Y VDL+HSKFAHHL+SITRG+  +   RSFGPF
Sbjct: 241  RSEGYEQPVQGGFLLRTKKLHLPDGTTYCVDLLHSKFAHHLVSITRGDSCTPKARSFGPF 300

Query: 279  EATACNGLEPLVRNMSNCF-PVPYSVVSRTYLYLSTLRKPDVQSSMAKLRQLVEEPTGIE 103
            EAT C  L  L+    NCF PV + VVSR Y YL +L+KPD QS+MAKL QL+ EPTG E
Sbjct: 301  EATGCKSLS-LLTTTPNCFIPVAFEVVSRLYRYLRSLKKPDQQSAMAKLSQLLPEPTGTE 359

Query: 102  MKFVKDFAALVISASDIQTMICPQRVKLFFGRW 4
            +KF  DFA LV+   ++++M+  Q +KL+ G+W
Sbjct: 360  IKFTHDFAKLVMKTGEVESMLGTQHLKLWMGKW 392


>ref|YP_595727.1| replicase [Daphne virus S]
 emb|CAF04326.1| replicase [Daphne virus S]
          Length = 2004

 Score =  479 bits (1234), Expect = e-150
 Identities = 227/392 (57%), Positives = 291/392 (74%)
 Frame = -1

Query: 1179 MSLTYRSPLEENVGAYDSSVQAAIASTSANYYKEAEVNNFQFFNYYLRPNAKRHLIEAGI 1000
            M+LTYRSP+EE +  YD+S+Q AIA  SAN+YK+ E  +F+FF Y L P AK++L  AGI
Sbjct: 1    MALTYRSPMEEIMTVYDTSIQGAIAGISANHYKDCETRDFKFFCYALEPEAKKNLTNAGI 60

Query: 999  YLSPYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISK 820
            YLSP+SA+PHSH  CKTLEN+LLY VLP +VDN F FVG+KQ KLE LK RNS LS +  
Sbjct: 61   YLSPFSAMPHSHPVCKTLENYLLYKVLPSVVDNSFLFVGMKQFKLELLKARNSNLSMVEV 120

Query: 819  INRFVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPSLKEREAKYLFLHDE 640
            INR+VTSAD+ RY S FV + SKP  G KRH   +E+  L++L+P +  R AK+LFLHDE
Sbjct: 121  INRYVTSADRVRYDSTFVIRRSKPIGGLKRHAPGLESAPLKELVPEIMARSAKHLFLHDE 180

Query: 639  IHYWDPKQLITFLEVIKPEVVYATLVYPPEILSGATMSLHKWCYTFKIVGKDLLFYPDGV 460
            +HYW  + LIT LEV+KP+ +  TLVYPPE+L G+T SL+ WCY F+++GKD  FYPDGV
Sbjct: 181  LHYWSHRDLITMLEVLKPDKLLGTLVYPPELLCGSTSSLYPWCYDFEVLGKDFFFYPDGV 240

Query: 459  LSEGYQQKIKNGYLLKARKIVLPNGDVYMVDLIHSKFAHHLISITRGELLSTDIRSFGPF 280
             SEGY Q +K G+LL   KI L  G+VY VD+I SKFAHHL+ +T+G+ ++   RSFG F
Sbjct: 241  RSEGYLQPLKGGFLLSTSKIHLSTGEVYCVDVIQSKFAHHLVCLTKGDAIALKFRSFGEF 300

Query: 279  EATACNGLEPLVRNMSNCFPVPYSVVSRTYLYLSTLRKPDVQSSMAKLRQLVEEPTGIEM 100
             AT C GL P+ + + +  PV Y ++SR Y YL +L+KPDVQS+M+KL QLV EPTGIE+
Sbjct: 301  AATGCKGLSPMTKGLGSFIPVSYPIISRIYRYLRSLKKPDVQSAMSKLSQLVPEPTGIEI 360

Query: 99   KFVKDFAALVISASDIQTMICPQRVKLFFGRW 4
            KF++DFA  VI  S I +MI P R+KLF G+W
Sbjct: 361  KFIQDFANFVIETSTINSMIVPSRLKLFMGKW 392


>dbj|BAU20378.1| replicase [Daphne virus S]
          Length = 2004

 Score =  479 bits (1233), Expect = e-150
 Identities = 229/392 (58%), Positives = 290/392 (73%)
 Frame = -1

Query: 1179 MSLTYRSPLEENVGAYDSSVQAAIASTSANYYKEAEVNNFQFFNYYLRPNAKRHLIEAGI 1000
            M+LTYRSP+EE +  YD+S+Q AIA  SAN+YKE E  +F+FF Y L P AK++L  AGI
Sbjct: 1    MALTYRSPMEEIMTVYDTSIQGAIAGISANHYKECETRDFKFFCYALDPEAKKNLTNAGI 60

Query: 999  YLSPYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISK 820
            YLSP+SA+PHSH  CKTLEN+LLY VLP +VDN F FVG+KQ KLE LK R+S LS I  
Sbjct: 61   YLSPFSAMPHSHPVCKTLENYLLYKVLPSVVDNSFLFVGMKQFKLELLKARSSNLSMIEV 120

Query: 819  INRFVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPSLKEREAKYLFLHDE 640
            INR+VTSAD+ RY S FV + SKP  G KRH   +E+  L++L+P +  R AK+LFLHDE
Sbjct: 121  INRYVTSADRVRYDSTFVIRRSKPIEGLKRHAPGLESAPLKELVPEIMARSAKHLFLHDE 180

Query: 639  IHYWDPKQLITFLEVIKPEVVYATLVYPPEILSGATMSLHKWCYTFKIVGKDLLFYPDGV 460
            +HYW  + LIT LEV+KP+ +  TLVYPPE+L G+T SLH WCY F+++GKD  FYPDGV
Sbjct: 181  LHYWSHRDLITMLEVLKPDKLLGTLVYPPELLCGSTSSLHPWCYDFEVLGKDFFFYPDGV 240

Query: 459  LSEGYQQKIKNGYLLKARKIVLPNGDVYMVDLIHSKFAHHLISITRGELLSTDIRSFGPF 280
             SEGY Q +K G+LL   KI L  G+VY VD+I SKFAHHL+ +T+G+ ++   RSFG F
Sbjct: 241  RSEGYLQPLKGGFLLSTSKIHLSTGEVYCVDVIQSKFAHHLVCLTKGDAIALKYRSFGEF 300

Query: 279  EATACNGLEPLVRNMSNCFPVPYSVVSRTYLYLSTLRKPDVQSSMAKLRQLVEEPTGIEM 100
             AT C GL P+ + + +  PV Y ++SR Y YL +L+KPDVQS+M+KL QLV EPTGIE+
Sbjct: 301  AATGCKGLNPMTKGLGSFIPVSYPIISRIYRYLRSLKKPDVQSAMSKLSQLVPEPTGIEI 360

Query: 99   KFVKDFAALVISASDIQTMICPQRVKLFFGRW 4
            KF +DFA  VI  S I +MI P R+KLF G+W
Sbjct: 361  KFTQDFANFVIETSAINSMIVPSRLKLFMGKW 392


>gb|AFI61525.1| putative viral replicase [American hop latent virus]
          Length = 1977

 Score =  469 bits (1206), Expect = e-147
 Identities = 234/395 (59%), Positives = 290/395 (73%), Gaps = 5/395 (1%)
 Frame = -1

Query: 1179 MSLTYRSPLEENVGAYDSSVQAAIASTSANYYKEAEVNNFQFFNYYLRPNAKRHLIEAGI 1000
            M+LTYR P+EE VG ++ +VQ+AIAST+AN YK  E  NF  FN  L   AK  L +AGI
Sbjct: 1    MALTYRGPIEEIVGCFEPAVQSAIASTAANGYKTLEEENFHAFNLALSAIAKEKLSKAGI 60

Query: 999  YLSPYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSK-----L 835
            YLSPYS VPHSH  CKTLEN++L+ VLP ++DNRF FVGIK  KL+FLK R  K     +
Sbjct: 61   YLSPYSGVPHSHPVCKTLENYMLFLVLPSIIDNRFTFVGIKNFKLDFLKARVEKKGKRNV 120

Query: 834  STISKINRFVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPSLKEREAKYL 655
            + I  INR+VTSADK RYG+DFV   SKP    KRH   +    LR+L+P   +R AK+L
Sbjct: 121  NLIESINRYVTSADKIRYGNDFVIASSKPCKMLKRHAPLLGKAALRELIPECVQRRAKHL 180

Query: 654  FLHDEIHYWDPKQLITFLEVIKPEVVYATLVYPPEILSGATMSLHKWCYTFKIVGKDLLF 475
            F+HDEIHYWD + L  FLEV++PE++ ATLVYPPE+LSGA  SL++WCYTF+I   +LLF
Sbjct: 181  FMHDEIHYWDARDLCGFLEVVRPEILLATLVYPPELLSGAKESLNRWCYTFEIKDSNLLF 240

Query: 474  YPDGVLSEGYQQKIKNGYLLKARKIVLPNGDVYMVDLIHSKFAHHLISITRGELLSTDIR 295
            YPDGV SEGY Q ++NG+LLKA +IVL +G VY VDLI SKFAHHL++IT+G  L+ D R
Sbjct: 241  YPDGVRSEGYVQPLRNGFLLKANRIVLADGTVYGVDLICSKFAHHLVAITKGSELNVDYR 300

Query: 294  SFGPFEATACNGLEPLVRNMSNCFPVPYSVVSRTYLYLSTLRKPDVQSSMAKLRQLVEEP 115
            SFGPFEA ACNGL  + R ++ CFPV + +VSR Y YL TL+KPDVQS+MAKL QLV EP
Sbjct: 301  SFGPFEAVACNGLSKMARKVNGCFPVSFDLVSRVYRYLRTLKKPDVQSAMAKLGQLVPEP 360

Query: 114  TGIEMKFVKDFAALVISASDIQTMICPQRVKLFFG 10
             G E+KFV++F+ LVI  + I + IC    KLF G
Sbjct: 361  NGAEIKFVEEFSKLVIRTNTINSTICADHAKLFLG 395


>ref|YP_006297586.1| unnamed protein product [American hop latent virus]
 gb|AFI61519.1| putative viral replicase [American hop latent virus]
          Length = 1977

 Score =  466 bits (1200), Expect = e-146
 Identities = 233/395 (58%), Positives = 289/395 (73%), Gaps = 5/395 (1%)
 Frame = -1

Query: 1179 MSLTYRSPLEENVGAYDSSVQAAIASTSANYYKEAEVNNFQFFNYYLRPNAKRHLIEAGI 1000
            M+LTYR P+EE VG ++ +VQ+AIAST+AN YK  E  NF  FN  L   AK  L +AGI
Sbjct: 1    MALTYRGPIEEIVGCFEPAVQSAIASTAANGYKTLEEENFHAFNLALSAIAKEKLSKAGI 60

Query: 999  YLSPYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSK-----L 835
            YLSPYS VPHSH  CKTLEN++L++VLP ++DNRF FVGIK  KL+FLK R  K     +
Sbjct: 61   YLSPYSGVPHSHPVCKTLENYMLFSVLPSIIDNRFTFVGIKNFKLDFLKARVEKKGKRNV 120

Query: 834  STISKINRFVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPSLKEREAKYL 655
            + I  INR+VTSADK RYG+DFV   SKP    KRH   +    LR+L+P   +R AK+L
Sbjct: 121  NLIESINRYVTSADKIRYGNDFVIASSKPCKMLKRHAPLLGKAALRELIPECVQRRAKHL 180

Query: 654  FLHDEIHYWDPKQLITFLEVIKPEVVYATLVYPPEILSGATMSLHKWCYTFKIVGKDLLF 475
            F+HDEIHYWD + L  FLEV++PE + ATLVYPPE+LSGA  SL++WCYTF+I   +LLF
Sbjct: 181  FMHDEIHYWDARDLCGFLEVVRPETLLATLVYPPELLSGAKESLNRWCYTFEIKDSNLLF 240

Query: 474  YPDGVLSEGYQQKIKNGYLLKARKIVLPNGDVYMVDLIHSKFAHHLISITRGELLSTDIR 295
            YPDGV SEGY Q ++NG+LLKA +IVL +G VY V LI SKFAHHL++IT+G  L+ D R
Sbjct: 241  YPDGVRSEGYVQPLRNGFLLKANRIVLADGTVYGVGLICSKFAHHLVAITKGSELNVDYR 300

Query: 294  SFGPFEATACNGLEPLVRNMSNCFPVPYSVVSRTYLYLSTLRKPDVQSSMAKLRQLVEEP 115
            SFGPFEA ACNGL  + R ++ CFPV + +VSR Y YL TL+KPDVQS+MAKL QLV EP
Sbjct: 301  SFGPFEAVACNGLSKMARKVNGCFPVSFDLVSRVYRYLRTLKKPDVQSAMAKLGQLVPEP 360

Query: 114  TGIEMKFVKDFAALVISASDIQTMICPQRVKLFFG 10
             G E+KFV++F+ LVI  + I + IC    KLF G
Sbjct: 361  NGAEIKFVEEFSKLVIRTNTINSTICADHAKLFLG 395


>gb|AVN98095.1| replicase [Chrysanthemum virus R]
          Length = 2075

 Score =  466 bits (1200), Expect = e-145
 Identities = 220/392 (56%), Positives = 291/392 (74%)
 Frame = -1

Query: 1179 MSLTYRSPLEENVGAYDSSVQAAIASTSANYYKEAEVNNFQFFNYYLRPNAKRHLIEAGI 1000
            M+LT+RSP+ + +  +D S+ + IA+T+A +YK  E  NF  FNY + P   +HLI+AGI
Sbjct: 1    MALTFRSPIADVITNFDPSINSIIATTAAEHYKRLEEENFALFNYAMSPQTTQHLIDAGI 60

Query: 999  YLSPYSAVPHSHAACKTLENHLLYNVLPPLVDNRFHFVGIKQSKLEFLKLRNSKLSTISK 820
            YLSP+S VPHSH ACKTLEN++LY VLP  +DN F+FVGIK  KL  LKLR+   + +  
Sbjct: 61   YLSPFSGVPHSHPACKTLENYILYIVLPQYIDNSFYFVGIKDFKLNALKLRHKHTNMVQC 120

Query: 819  INRFVTSADKARYGSDFVKKVSKPHVGFKRHELQVETPTLRDLLPSLKEREAKYLFLHDE 640
            INR+VTS DK RY SDFV + SKPH G  RH + +E+ TLRDL+P L  R  K +FLHDE
Sbjct: 121  INRYVTSQDKMRYPSDFVIRYSKPHEGLSRHRMSLESHTLRDLVPELMSRSCKKIFLHDE 180

Query: 639  IHYWDPKQLITFLEVIKPEVVYATLVYPPEILSGATMSLHKWCYTFKIVGKDLLFYPDGV 460
            +HYW   +L TFLEV++P+VV  T+VYPPE+L G+  SL+ WCYT+++ G+ L FYPDGV
Sbjct: 181  LHYWKIDELCTFLEVVQPKVVIGTIVYPPELLKGSKKSLNNWCYTYEVKGRALRFYPDGV 240

Query: 459  LSEGYQQKIKNGYLLKARKIVLPNGDVYMVDLIHSKFAHHLISITRGELLSTDIRSFGPF 280
              EGY+Q +  G+LL+  KI L +G VYMVD++ SKFAHHL+++TRG      +RSFGPF
Sbjct: 241  RGEGYEQPLNGGFLLECGKITLYDGTVYMVDILCSKFAHHLVALTRGVAAGPTMRSFGPF 300

Query: 279  EATACNGLEPLVRNMSNCFPVPYSVVSRTYLYLSTLRKPDVQSSMAKLRQLVEEPTGIEM 100
            EATACNGL+PL R+++  FP+PY VVS+ Y YL TLRKPD QSSMAKL QL+  PTG E+
Sbjct: 301  EATACNGLDPLTRDVTCSFPIPYEVVSKVYRYLKTLRKPDEQSSMAKLTQLLPCPTGEEI 360

Query: 99   KFVKDFAALVISASDIQTMICPQRVKLFFGRW 4
             FV++F++LVIS + I+TMI   R+K+F G++
Sbjct: 361  VFVQEFSSLVISTNTIKTMISADRLKVFLGKY 392