BLASTX nr result

ID: Chrysanthemum21_contig00001768 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00001768
         (476 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI08831.1| hypothetical protein Ccrd_012800 [Cynara carduncu...   101   3e-24
ref|XP_022006960.1| transcription factor bHLH62-like isoform X2 ...    89   8e-19
ref|XP_022006959.1| transcription factor bHLH62-like isoform X1 ...    89   8e-19
ref|XP_023754521.1| transcription factor BEE 2-like [Lactuca sat...    88   1e-18

>gb|KVI08831.1| hypothetical protein Ccrd_012800 [Cynara cardunculus var. scolymus]
          Length = 172

 Score =  101 bits (252), Expect = 3e-24
 Identities = 71/149 (47%), Positives = 84/149 (56%), Gaps = 7/149 (4%)
 Frame = +1

Query: 49  MGEILQIFDHSPPSHYQMHHHDQFQHGLVSVESQLNEVWESESPLSSIFN----FGCSEV 216
           M EILQI   SPPS +QM  H   Q GLV+VESQ N + +S  P   IF+    F  SE 
Sbjct: 1   MPEILQILHQSPPSRHQMPPH--LQRGLVNVESQFNWLIDSAFPSPGIFDVTDHFQWSEF 58

Query: 217 AENSFMDFS---VDGLSKVTTEVEQTQSSRKRKLELLEVEVDSRKQSVECDSELVEPPKA 387
             + F D S   +D LSKVT   +Q QS++KRKLE   VEV + K   E +         
Sbjct: 59  DGSPFTDLSSSSIDELSKVTAINDQNQSAKKRKLEFDVVEVKAEKHIDELE--------- 109

Query: 388 KRKPRNGDSKPKVDHPKTDYIHVRARRGQ 474
                 GDSKPK+D PK DYIHVRARRGQ
Sbjct: 110 ------GDSKPKID-PKADYIHVRARRGQ 131


>ref|XP_022006960.1| transcription factor bHLH62-like isoform X2 [Helianthus annuus]
          Length = 201

 Score = 88.6 bits (218), Expect = 8e-19
 Identities = 62/129 (48%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
 Frame = +1

Query: 100 MHH---HDQFQHGLVSVESQLNEVWESESPLSSIFN-FGCSEVAENSFMDFSVDGLSKVT 267
           +HH   H Q Q GLV+VESQ    +E    L    N F C       F   SVD LSKVT
Sbjct: 5   LHHDQMHSQLQRGLVNVESQCKWSYEENDHLLCCGNPFEC-------FSSSSVDELSKVT 57

Query: 268 TEVEQTQSSRKRKLELLEVEVDSRKQSVECDSELVEPPKAKRKPRNGDSKPKVDHPKTDY 447
              E   S RKRKL           +SV+CD   VE PKA+R   NG+SKPK+D PK DY
Sbjct: 58  AINEHNLSRRKRKL----------CESVDCDLGSVEQPKARRSIPNGNSKPKMD-PKPDY 106

Query: 448 IHVRARRGQ 474
           IHVRAR GQ
Sbjct: 107 IHVRARHGQ 115


>ref|XP_022006959.1| transcription factor bHLH62-like isoform X1 [Helianthus annuus]
 gb|OTF98028.1| putative myc-type, basic helix-loop-helix (bHLH) domain-containing
           protein [Helianthus annuus]
          Length = 202

 Score = 88.6 bits (218), Expect = 8e-19
 Identities = 62/129 (48%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
 Frame = +1

Query: 100 MHH---HDQFQHGLVSVESQLNEVWESESPLSSIFN-FGCSEVAENSFMDFSVDGLSKVT 267
           +HH   H Q Q GLV+VESQ    +E    L    N F C       F   SVD LSKVT
Sbjct: 5   LHHDQMHSQLQRGLVNVESQCKWSYEENDHLLCCGNPFEC-------FSSSSVDELSKVT 57

Query: 268 TEVEQTQSSRKRKLELLEVEVDSRKQSVECDSELVEPPKAKRKPRNGDSKPKVDHPKTDY 447
              E   S RKRKL           +SV+CD   VE PKA+R   NG+SKPK+D PK DY
Sbjct: 58  AINEHNLSRRKRKL----------CESVDCDLGSVEQPKARRSIPNGNSKPKMD-PKPDY 106

Query: 448 IHVRARRGQ 474
           IHVRAR GQ
Sbjct: 107 IHVRARHGQ 115


>ref|XP_023754521.1| transcription factor BEE 2-like [Lactuca sativa]
 gb|PLY92497.1| hypothetical protein LSAT_2X76540 [Lactuca sativa]
          Length = 194

 Score = 87.8 bits (216), Expect = 1e-18
 Identities = 67/146 (45%), Positives = 81/146 (55%), Gaps = 4/146 (2%)
 Frame = +1

Query: 49  MGEILQIFDHSPPSHYQMHHHDQFQHGLVSVESQLNEVWESESPLSSIFNFGCSEVAENS 228
           M EILQIF HSPP H + H H +F     S++S L       SP+ +  +F CSE A + 
Sbjct: 1   MSEILQIFQHSPPPHVEFHGH-EFN---CSMDSGL------PSPVIT-DHFQCSEFAGSP 49

Query: 229 FMDF---SVDGLSKVTTEVEQTQSSRKRKLEL-LEVEVDSRKQSVECDSELVEPPKAKRK 396
           F +F   SVD LSKVTT +   Q+  KRKLE   +VEVDS+KQ               RK
Sbjct: 50  FTNFLSSSVDELSKVTTIIGHNQNLNKRKLEFDDDVEVDSQKQ---------------RK 94

Query: 397 PRNGDSKPKVDHPKTDYIHVRARRGQ 474
           P     K K   PKTDYIHVRARRG+
Sbjct: 95  PNTKTGKSK---PKTDYIHVRARRGE 117


Top