BLASTX nr result

ID: Chrysanthemum21_contig00001403 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00001403
         (837 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY71436.1| hypothetical protein LSAT_8X33380 [Lactuca sativa]      69   2e-09
ref|XP_023736871.1| helicase-like transcription factor CHR28 [La...    69   2e-09
gb|OTG04779.1| hypothetical protein HannXRQ_Chr12g0366201 [Helia...    68   5e-09
ref|XP_021997550.1| helicase-like transcription factor CHR28 [He...    68   5e-09
gb|KVH97547.1| Helicase, C-terminal [Cynara cardunculus var. sco...    65   4e-08
gb|KVI05248.1| Helicase, C-terminal [Cynara cardunculus var. sco...    59   6e-06

>gb|PLY71436.1| hypothetical protein LSAT_8X33380 [Lactuca sativa]
          Length = 915

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 42/103 (40%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
 Frame = -1

Query: 801 ILPPKTTNLTSVDFSTEERAFDLTSKNHLPAEMEDTISRAGIDSRKERNHGSRVLP---- 634
           I+PP+    +S    T  + +     NH+ A ME+T +RA  D  K+ NH SRVLP    
Sbjct: 113 IVPPRGVG-SSQTRETYGKTYPHQWPNHVKAHMEETFNRASNDVMKD-NHVSRVLPSYMN 170

Query: 633 PMSVPTTSYGGPPDPYRPGAVVDELVGDERLIYHKEIDQSSRK 505
           P+SVPT+ YG   D YRPG V ++   DERLIY   +   ++K
Sbjct: 171 PISVPTSQYGAQSDLYRPGVVNEQAAVDERLIYQVALQDLNQK 213


>ref|XP_023736871.1| helicase-like transcription factor CHR28 [Lactuca sativa]
 ref|XP_023736872.1| helicase-like transcription factor CHR28 [Lactuca sativa]
          Length = 936

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 42/103 (40%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
 Frame = -1

Query: 801 ILPPKTTNLTSVDFSTEERAFDLTSKNHLPAEMEDTISRAGIDSRKERNHGSRVLP---- 634
           I+PP+    +S    T  + +     NH+ A ME+T +RA  D  K+ NH SRVLP    
Sbjct: 113 IVPPRGVG-SSQTRETYGKTYPHQWPNHVKAHMEETFNRASNDVMKD-NHVSRVLPSYMN 170

Query: 633 PMSVPTTSYGGPPDPYRPGAVVDELVGDERLIYHKEIDQSSRK 505
           P+SVPT+ YG   D YRPG V ++   DERLIY   +   ++K
Sbjct: 171 PISVPTSQYGAQSDLYRPGVVNEQAAVDERLIYQVALQDLNQK 213


>gb|OTG04779.1| hypothetical protein HannXRQ_Chr12g0366201 [Helianthus annuus]
          Length = 904

 Score = 67.8 bits (164), Expect = 5e-09
 Identities = 40/73 (54%), Positives = 46/73 (63%), Gaps = 9/73 (12%)
 Frame = -1

Query: 726 KNHLPAEMEDTISRAGI---DSRKERNHGSRVLPP-----MSVPTTSYGGPPDPYRPGAV 571
           +N   A MED+ SR G    D  K+ +HGSRVLP      + VPT+ Y GPPD YRP  V
Sbjct: 91  QNRGKAHMEDSFSRFGPYGNDLMKDNHHGSRVLPSSMRPHVPVPTSQYAGPPDLYRPSGV 150

Query: 570 VDE-LVGDERLIY 535
           VDE  VGDERLIY
Sbjct: 151 VDEQAVGDERLIY 163


>ref|XP_021997550.1| helicase-like transcription factor CHR28 [Helianthus annuus]
 ref|XP_021997551.1| helicase-like transcription factor CHR28 [Helianthus annuus]
          Length = 955

 Score = 67.8 bits (164), Expect = 5e-09
 Identities = 40/73 (54%), Positives = 46/73 (63%), Gaps = 9/73 (12%)
 Frame = -1

Query: 726 KNHLPAEMEDTISRAGI---DSRKERNHGSRVLPP-----MSVPTTSYGGPPDPYRPGAV 571
           +N   A MED+ SR G    D  K+ +HGSRVLP      + VPT+ Y GPPD YRP  V
Sbjct: 142 QNRGKAHMEDSFSRFGPYGNDLMKDNHHGSRVLPSSMRPHVPVPTSQYAGPPDLYRPSGV 201

Query: 570 VDE-LVGDERLIY 535
           VDE  VGDERLIY
Sbjct: 202 VDEQAVGDERLIY 214


>gb|KVH97547.1| Helicase, C-terminal [Cynara cardunculus var. scolymus]
          Length = 1098

 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 35/68 (51%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
 Frame = -1

Query: 723 NHLPAEMEDTISRAGIDSRKERNHGSRVLPP-----MSVPTTSYGGPPDPYRPGAVVDEL 559
           +H    M+D  SR   D   + +HGSRVLPP     MSVP T Y G  DPY+PGA V E 
Sbjct: 271 SHTNLHMQDNFSRPNYDVAMKNHHGSRVLPPWMQGSMSVPATRYAGQSDPYQPGA-VQET 329

Query: 558 VGDERLIY 535
            GDER IY
Sbjct: 330 AGDERHIY 337


>gb|KVI05248.1| Helicase, C-terminal [Cynara cardunculus var. scolymus]
          Length = 984

 Score = 58.5 bits (140), Expect = 6e-06
 Identities = 30/63 (47%), Positives = 37/63 (58%)
 Frame = -1

Query: 723 NHLPAEMEDTISRAGIDSRKERNHGSRVLPPMSVPTTSYGGPPDPYRPGAVVDELVGDER 544
           NH    ME+  SRA  D  K+ +HG  + P M+   T Y G  D YR G VV++ VGDER
Sbjct: 165 NHAKVHMEENFSRASNDVVKD-SHGRVLTPSMNASATQYAGQSDLYRSGGVVEQAVGDER 223

Query: 543 LIY 535
           LIY
Sbjct: 224 LIY 226


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