BLASTX nr result

ID: Chrysanthemum21_contig00001329 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00001329
         (602 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021977590.1| nuclear pore complex protein DDB_G0274915 is...    89   6e-17
ref|XP_021977589.1| nuclear pore complex protein DDB_G0274915 is...    89   6e-17
ref|XP_023771815.1| uncharacterized protein LOC111920464 isoform...    56   1e-05
ref|XP_023771811.1| uncharacterized protein LOC111920464 isoform...    56   1e-05

>ref|XP_021977590.1| nuclear pore complex protein DDB_G0274915 isoform X2 [Helianthus
           annuus]
          Length = 896

 Score = 89.0 bits (219), Expect = 6e-17
 Identities = 59/137 (43%), Positives = 75/137 (54%), Gaps = 11/137 (8%)
 Frame = -1

Query: 389 DEKSTRNWSGMNSSVKSGLEGVGQFGGNLYGNVKPTTP---WAFGDGDREVNDVPVVGFD 219
           D  + +NWS MNSSVKSGLE V   GG+++G VK  T    W+ G+ D   +  P++  D
Sbjct: 240 DAPNAQNWSSMNSSVKSGLEHVDPPGGHVFG-VKSNTQSQKWSLGN-DGSDSGAPMMPLD 297

Query: 218 MLS-------GDFGSSQVDYGQSLFEAKYGGQADGSRGKEGSPMFXXXXXXXXXXDKNVG 60
            +         D+GSSQV Y QSL  + Y G ADGSRGKE S  F          + NVG
Sbjct: 298 YVLLPSRSFVQDYGSSQVGYSQSLSGSMYSGPADGSRGKEDSSSFGPVFGRPVQRENNVG 357

Query: 59  PSVISKS-HDAYPATNH 12
           PS+I  S   + PAT H
Sbjct: 358 PSIIGASLGTSSPATGH 374


>ref|XP_021977589.1| nuclear pore complex protein DDB_G0274915 isoform X1 [Helianthus
           annuus]
 gb|OTG18706.1| putative outer protein D [Helianthus annuus]
          Length = 898

 Score = 89.0 bits (219), Expect = 6e-17
 Identities = 59/137 (43%), Positives = 75/137 (54%), Gaps = 11/137 (8%)
 Frame = -1

Query: 389 DEKSTRNWSGMNSSVKSGLEGVGQFGGNLYGNVKPTTP---WAFGDGDREVNDVPVVGFD 219
           D  + +NWS MNSSVKSGLE V   GG+++G VK  T    W+ G+ D   +  P++  D
Sbjct: 240 DAPNAQNWSSMNSSVKSGLEHVDPPGGHVFG-VKSNTQSQKWSLGN-DGSDSGAPMMPLD 297

Query: 218 MLS-------GDFGSSQVDYGQSLFEAKYGGQADGSRGKEGSPMFXXXXXXXXXXDKNVG 60
            +         D+GSSQV Y QSL  + Y G ADGSRGKE S  F          + NVG
Sbjct: 298 YVLLPSRSFVQDYGSSQVGYSQSLSGSMYSGPADGSRGKEDSSSFGPVFGRPVQRENNVG 357

Query: 59  PSVISKS-HDAYPATNH 12
           PS+I  S   + PAT H
Sbjct: 358 PSIIGASLGTSSPATGH 374


>ref|XP_023771815.1| uncharacterized protein LOC111920464 isoform X2 [Lactuca sativa]
          Length = 836

 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 62/198 (31%), Positives = 78/198 (39%), Gaps = 43/198 (21%)
 Frame = -1

Query: 602 SNLSPLAQPFTVDRSXXXXXXXXXXXXXXXXXXPLDGLNYGSSWVPSYHSPTVAADSIRT 423
           SNLSPLA PFTVDRS                     G+ + SSW  S       ADS RT
Sbjct: 17  SNLSPLAPPFTVDRSNQNKPALNSNSISHFNDPSY-GVPFTSSWHSSTARQDFLADSGRT 75

Query: 422 NTVSYDGFANNDEK----------STRNWSGMNSSVKSGLEGV----------------- 324
            T+       ND +          +  NWSG+NS+ K GLE +                 
Sbjct: 76  TTLPL-----NDSRYMIPEPVNLPTAGNWSGLNSNGKHGLEQITPGRPHWSAVYPSPKRV 130

Query: 323 -GQFGGNLYGNVKPTTPWAFGDGDREVNDVPVV-----GFDMLS----------GDFGSS 192
              F  NL    KP  P          +D+P+V     G+D+LS          GD  +S
Sbjct: 131 ADSFSYNL-SEAKPFYPPYASSSSVNNDDIPLVTFSEPGYDLLSSSGLGLAHGHGD-ETS 188

Query: 191 QVDYGQSLFEAKYGGQAD 138
           QVDY +SL   +Y  Q D
Sbjct: 189 QVDYTRSLSGLEYNPQHD 206


>ref|XP_023771811.1| uncharacterized protein LOC111920464 isoform X1 [Lactuca sativa]
          Length = 838

 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 62/198 (31%), Positives = 78/198 (39%), Gaps = 43/198 (21%)
 Frame = -1

Query: 602 SNLSPLAQPFTVDRSXXXXXXXXXXXXXXXXXXPLDGLNYGSSWVPSYHSPTVAADSIRT 423
           SNLSPLA PFTVDRS                     G+ + SSW  S       ADS RT
Sbjct: 17  SNLSPLAPPFTVDRSNQNKPALNSNSISHFNDPSY-GVPFTSSWHSSTARQDFLADSGRT 75

Query: 422 NTVSYDGFANNDEK----------STRNWSGMNSSVKSGLEGV----------------- 324
            T+       ND +          +  NWSG+NS+ K GLE +                 
Sbjct: 76  TTLPL-----NDSRYMIPEPVNLPTAGNWSGLNSNGKHGLEQITPGRPHWSAVYPSPKRV 130

Query: 323 -GQFGGNLYGNVKPTTPWAFGDGDREVNDVPVV-----GFDMLS----------GDFGSS 192
              F  NL    KP  P          +D+P+V     G+D+LS          GD  +S
Sbjct: 131 ADSFSYNL-SEAKPFYPPYASSSSVNNDDIPLVTFSEPGYDLLSSSGLGLAHGHGD-ETS 188

Query: 191 QVDYGQSLFEAKYGGQAD 138
           QVDY +SL   +Y  Q D
Sbjct: 189 QVDYTRSLSGLEYNPQHD 206


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