BLASTX nr result

ID: Chrysanthemum21_contig00001282 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00001282
         (598 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021970885.1| protein CURVATURE THYLAKOID 1B, chloroplasti...    64   2e-09
gb|KVH88995.1| protein of unknown function DUF4308 [Cynara cardu...    63   6e-09

>ref|XP_021970885.1| protein CURVATURE THYLAKOID 1B, chloroplastic [Helianthus annuus]
 gb|OTG23520.1| putative photosystem I P subunit [Helianthus annuus]
          Length = 171

 Score = 64.3 bits (155), Expect = 2e-09
 Identities = 34/53 (64%), Positives = 35/53 (66%)
 Frame = +3

Query: 438 LIDGRAPLRQGAVTSAQCVXXXXXXXXXXXXXNRVSKATGYCRKLARNVAAMA 596
           LIDG+AP RQ A  SAQCV             NRV KATGYCRKLARNVAAMA
Sbjct: 15  LIDGKAPPRQAAAASAQCVTLPSLTAPPLQQQNRVWKATGYCRKLARNVAAMA 67


>gb|KVH88995.1| protein of unknown function DUF4308 [Cynara cardunculus var.
           scolymus]
          Length = 175

 Score = 63.2 bits (152), Expect = 6e-09
 Identities = 35/54 (64%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
 Frame = +3

Query: 438 LIDGRAPLRQGAV-TSAQCVXXXXXXXXXXXXXNRVSKATGYCRKLARNVAAMA 596
           LIDG+APLRQ AV TS+QCV             NR  KATGYCRKLARNVAAMA
Sbjct: 17  LIDGKAPLRQSAVATSSQCVTLPSLPPPPLQQQNRAWKATGYCRKLARNVAAMA 70


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