BLASTX nr result

ID: Chrysanthemum21_contig00000656 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00000656
         (450 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023745946.1| photosystem II 5 kDa protein, chloroplastic-...    81   5e-17
ref|XP_022000890.1| photosystem II 5 kDa protein, chloroplastic-...    75   1e-14
ref|XP_022024320.1| photosystem II 5 kDa protein, chloroplastic-...    74   2e-14

>ref|XP_023745946.1| photosystem II 5 kDa protein, chloroplastic-like [Lactuca sativa]
 gb|PLY64640.1| hypothetical protein LSAT_6X25460 [Lactuca sativa]
          Length = 112

 Score = 81.3 bits (199), Expect = 5e-17
 Identities = 43/63 (68%), Positives = 50/63 (79%)
 Frame = +2

Query: 194 MASVTMASSFLGGSAAMTVTKPPSSNTSRRALVVMANASNAAGVEKVVAEEKKDATNTNG 373
           MAS+TMASSFLGGSAA+ VTK PS+ T RR LVVMA AS  AGVE  V +EKK+ ++ NG
Sbjct: 1   MASMTMASSFLGGSAAIAVTKQPST-TGRRGLVVMAKASKVAGVENTVVDEKKEGSSING 59

Query: 374 RRD 382
           RRD
Sbjct: 60  RRD 62


>ref|XP_022000890.1| photosystem II 5 kDa protein, chloroplastic-like [Helianthus
           annuus]
 gb|OTG01346.1| putative photosystem II 5 kDa protein [Helianthus annuus]
          Length = 110

 Score = 75.1 bits (183), Expect = 1e-14
 Identities = 42/64 (65%), Positives = 50/64 (78%), Gaps = 1/64 (1%)
 Frame = +2

Query: 194 MASVTMASSFLGGSAAMTVTKPPSSNTSRRALVVMANASN-AAGVEKVVAEEKKDATNTN 370
           MAS+TMAS+FLGGSAA+  TK PS+ TSRR   VMANAS+  +GVEKVV EEKK+    +
Sbjct: 1   MASMTMASTFLGGSAAIAATKQPSTTTSRRGFAVMANASSKVSGVEKVVVEEKKE----S 56

Query: 371 GRRD 382
           GRRD
Sbjct: 57  GRRD 60


>ref|XP_022024320.1| photosystem II 5 kDa protein, chloroplastic-like [Helianthus
           annuus]
 gb|OTG34999.1| putative photosystem II 5 kD protein [Helianthus annuus]
          Length = 110

 Score = 74.3 bits (181), Expect = 2e-14
 Identities = 40/63 (63%), Positives = 47/63 (74%)
 Frame = +2

Query: 194 MASVTMASSFLGGSAAMTVTKPPSSNTSRRALVVMANASNAAGVEKVVAEEKKDATNTNG 373
           MAS+TMAS+FL GSAA+  TK P++NTSRR LVVMAN S  AG EKVV +E K     +G
Sbjct: 1   MASMTMASTFLTGSAAIAATKQPNTNTSRRGLVVMANGSKVAGAEKVVVDENKAG---SG 57

Query: 374 RRD 382
           RRD
Sbjct: 58  RRD 60


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