BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00000453
         (2099 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF95196.1| replicase [Chrysanthemum virus B]                    1112   0.0  
emb|CAO78688.1| polyprotein [Chrysanthemum virus B]                  1109   0.0  
emb|CAK54343.1| polyprotein, partial [Chrysanthemum virus B]         1109   0.0  
emb|CAJ41873.1| replicase, partial [Chrysanthemum virus B]           1102   0.0  
ref|YP_001086452.2| polyprotein [Chrysanthemum virus B] >gi|1547...  1093   0.0  
emb|CAK97712.1| polyprotein, partial [Chrysanthemum virus B]         1093   0.0  
emb|CAK54345.1| polyprotein, partial [Chrysanthemum virus B]         1092   0.0  
emb|CAO78694.1| polyprotein [Chrysanthemum virus B]                  1088   0.0  
emb|CAK54342.1| polyprotein, partial [Chrysanthemum virus B]         1088   0.0  
emb|CAO78682.1| polyprotein [Chrysanthemum virus B]                  1034   0.0  
emb|CAK54344.1| polyprotein, partial [Chrysanthemum virus B]         1034   0.0  
gb|AKZ66614.1| replicase [Atractylodes mottle virus]                  883   0.0  
ref|YP_009022064.1| replicase [Gaillardia latent virus] >gi|6011...   859   0.0  
ref|YP_001552317.1| replicase [Phlox virus B] >gi|157932100|gb|A...   850   0.0  
ref|YP_001165301.1| replicase [Phlox virus S] >gi|145206988|gb|A...   843   0.0  
ref|YP_009288956.1| replicase [Ligustrum virus A] >gi|1064270261...   830   0.0  
emb|CAJ41874.1| replicase, partial [Chrysanthemum virus B]            780   0.0  
ref|YP_004035878.1| RNA-dependent RNA polymerase [Cowpea mild mo...   801   0.0  
ref|YP_006297586.1| unnamed protein product [American hop latent...   795   0.0  
gb|ALJ56053.1| putative viral replicase [American hop latent virus]   795   0.0  

>dbj|BAF95196.1| replicase [Chrysanthemum virus B]
          Length = 2094

 Score = 1112 bits (2877), Expect = 0.0
 Identities = 554/628 (88%), Positives = 566/628 (90%), Gaps = 30/628 (4%)
 Frame = -1

Query: 1796 EQLLEGQSYKFNVQSHRFNNENFRGRLPCEITGKDGAEPYLEEHLLYTGCEELVQIMDEY 1617
            EQLLEGQ+YKFNVQSHRFNNENFRGRLPCEI  KD AE   EEHLLYTGCEELVQIMDEY
Sbjct: 1417 EQLLEGQNYKFNVQSHRFNNENFRGRLPCEIVSKDVAETLSEEHLLYTGCEELVQIMDEY 1476

Query: 1616 SKVFLVSSFEEKKI------------------------------IXXXSAATSEKRWLTA 1527
            SK+FLVSSFEEKKI                              I   SAATSEKRWLTA
Sbjct: 1477 SKIFLVSSFEEKKIVETHFPMNEQRKVYTFGESTGLNFKVGTIIITNVSAATSEKRWLTA 1536

Query: 1526 LSRFSENICFVNLLGTDWSGLFGLYKHRALGHFLSKRAQLKDLLDHLPGQPQFQNGFSTL 1347
            LSRFSEN+CFVNLLGTDW+GLFGLYKHRALG FLS+RAQLKDLLDHLPG PQFQ+GFST 
Sbjct: 1537 LSRFSENVCFVNLLGTDWNGLFGLYKHRALGLFLSRRAQLKDLLDHLPGHPQFQSGFSTF 1596

Query: 1346 IGRDAGKREEKLIGDPWLKCMIDLGQTXXXXXXXXXXXXXXXEWFKTHLPQAELEGVRAR 1167
            IGRDAGKREEKLIGDPWLKCMIDLGQT               EWFKTHLPQA+LEGVRAR
Sbjct: 1597 IGRDAGKREEKLIGDPWLKCMIDLGQTEDVEEVELLEEVMQEEWFKTHLPQADLEGVRAR 1656

Query: 1166 WVHKIMLKEAREVRMGDIVSEQFTDDYPKELGINLTNAAERFETIYPRHRASDTVTFIMA 987
            WVHKIMLKEAREVRMGDIVSEQFTDDYPKELG NLTNAAERFETIYPRHRASDTVTF+MA
Sbjct: 1657 WVHKIMLKEAREVRMGDIVSEQFTDDYPKELGTNLTNAAERFETIYPRHRASDTVTFLMA 1716

Query: 986  VKKRLRFSRPAVERAKLQEAKLYGKFLLGEFLKKVPLKQAHNATMMERAKFDFEEKKTSK 807
            VKKRLRFSRPAVE+AKLQEAKLYGKFLL EFLKKVPLKQAHN  MMERAKFDFEEKKTSK
Sbjct: 1717 VKKRLRFSRPAVEKAKLQEAKLYGKFLLNEFLKKVPLKQAHNTNMMERAKFDFEEKKTSK 1776

Query: 806  SAAIIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAPY 627
            SAAIIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFR AKAAQSIVCFQHAVLCRFAPY
Sbjct: 1777 SAAIIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRGAKAAQSIVCFQHAVLCRFAPY 1836

Query: 626  MRYIEAKLHEALPSRFYIHSGKGLDELNEWVIKGKFEGVCTESDYEAFDASQDQYIVAFE 447
            MRYIEAKLHEALPSRFYIHSGKGLDELNEWVIKGKFEG+CTESDYEAFDASQDQYIVAFE
Sbjct: 1837 MRYIEAKLHEALPSRFYIHSGKGLDELNEWVIKGKFEGICTESDYEAFDASQDQYIVAFE 1896

Query: 446  LALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNI 267
            LALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNI
Sbjct: 1897 LALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNI 1956

Query: 266  KDSEHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCSDGIYKKP 87
            KDSEHICFAGDDMCASERLCIKK+HEGFL+KLKLKAKVFFVDKPTFCGWHLCSDGIYKKP
Sbjct: 1957 KDSEHICFAGDDMCASERLCIKKDHEGFLSKLKLKAKVFFVDKPTFCGWHLCSDGIYKKP 2016

Query: 86   QLVLERMCIAKEKNNLANCLDNYAIEVS 3
            QLVLERMCIAKEKNNLANCLDNYAIEVS
Sbjct: 2017 QLVLERMCIAKEKNNLANCLDNYAIEVS 2044



 Score =  177 bits (448), Expect = 3e-42
 Identities = 84/98 (85%), Positives = 88/98 (89%)
 Frame = -3

Query: 2097 FYVSPRKALAQEHESKCMSLGKASVGALGGATRKSGRKERQGVAKHWKTLTFETFLKQVH 1918
            FYVSPRKALAQEHESKCMSLGK   G  G  T++ G +ER GVAKHWKTLTFETFLKQVH
Sbjct: 1296 FYVSPRKALAQEHESKCMSLGKRRAGTFGRETKERGNRERLGVAKHWKTLTFETFLKQVH 1355

Query: 1917 MVKPGMALIIDEIQLYPPGYLDLVCLLLVEGVHIYIGG 1804
            MVKPGMALIIDEIQLYPPGYLDLVCLLLVEGVHIY+GG
Sbjct: 1356 MVKPGMALIIDEIQLYPPGYLDLVCLLLVEGVHIYVGG 1393


>emb|CAO78688.1| polyprotein [Chrysanthemum virus B]
          Length = 2078

 Score = 1109 bits (2868), Expect = 0.0
 Identities = 551/628 (87%), Positives = 566/628 (90%), Gaps = 30/628 (4%)
 Frame = -1

Query: 1796 EQLLEGQSYKFNVQSHRFNNENFRGRLPCEITGKDGAEPYLEEHLLYTGCEELVQIMDEY 1617
            EQLLEGQSYKFNVQSHRFNNENFRGRLPCEITGK+ AE   EEHLLYTGCEELVQIMDEY
Sbjct: 1401 EQLLEGQSYKFNVQSHRFNNENFRGRLPCEITGKEVAESLSEEHLLYTGCEELVQIMDEY 1460

Query: 1616 SKVFLVSSFEEKKIIXXX------------------------------SAATSEKRWLTA 1527
            SK+FLVSSFEEKKII                                 SAATSEKRWLTA
Sbjct: 1461 SKIFLVSSFEEKKIIETHFPISEQRKVYTFGESTGLNFKVGTIIITNVSAATSEKRWLTA 1520

Query: 1526 LSRFSENICFVNLLGTDWSGLFGLYKHRALGHFLSKRAQLKDLLDHLPGQPQFQNGFSTL 1347
            LSRFSENICFVNLLGTDW+GLFGLYKHRALG FLSK+AQLKDLLDHLPGQPQFQNG STL
Sbjct: 1521 LSRFSENICFVNLLGTDWNGLFGLYKHRALGRFLSKQAQLKDLLDHLPGQPQFQNGLSTL 1580

Query: 1346 IGRDAGKREEKLIGDPWLKCMIDLGQTXXXXXXXXXXXXXXXEWFKTHLPQAELEGVRAR 1167
            IGRDAGKR+EKL+GDPWLKCMIDLGQ                EWFKTHLPQA+LEGVRAR
Sbjct: 1581 IGRDAGKRKEKLLGDPWLKCMIDLGQAEDAEEVELLEEVMQEEWFKTHLPQADLEGVRAR 1640

Query: 1166 WVHKIMLKEAREVRMGDIVSEQFTDDYPKELGINLTNAAERFETIYPRHRASDTVTFIMA 987
            WVHKIMLKEAREVRMG++VSEQFTDDYPKELG NLTNAAERFETIYPRHRASDTVTFIMA
Sbjct: 1641 WVHKIMLKEAREVRMGNMVSEQFTDDYPKELGTNLTNAAERFETIYPRHRASDTVTFIMA 1700

Query: 986  VKKRLRFSRPAVERAKLQEAKLYGKFLLGEFLKKVPLKQAHNATMMERAKFDFEEKKTSK 807
            VKKRLRFSRPAVE+AKLQEAKLYGKFLL EFLKKV LKQAHN TMMERAKFDFEEKKTSK
Sbjct: 1701 VKKRLRFSRPAVEKAKLQEAKLYGKFLLNEFLKKVSLKQAHNTTMMERAKFDFEEKKTSK 1760

Query: 806  SAAIIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAPY 627
            SAA IENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFR+AKAAQSIVCFQHAVLCRFAPY
Sbjct: 1761 SAATIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRIAKAAQSIVCFQHAVLCRFAPY 1820

Query: 626  MRYIEAKLHEALPSRFYIHSGKGLDELNEWVIKGKFEGVCTESDYEAFDASQDQYIVAFE 447
            MRYIEAKLHE LPSRFYIHSGKGL+ELNEWVIKGKFEG+CTESDYEAFDASQDQYIVAFE
Sbjct: 1821 MRYIEAKLHEVLPSRFYIHSGKGLEELNEWVIKGKFEGICTESDYEAFDASQDQYIVAFE 1880

Query: 446  LALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNI 267
            LALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNI
Sbjct: 1881 LALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNI 1940

Query: 266  KDSEHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCSDGIYKKP 87
            +DSEHICFAGDD+CASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLC DGIYKKP
Sbjct: 1941 RDSEHICFAGDDLCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCPDGIYKKP 2000

Query: 86   QLVLERMCIAKEKNNLANCLDNYAIEVS 3
            QLVLERMCIAKEKNNLANCLDNYAIEVS
Sbjct: 2001 QLVLERMCIAKEKNNLANCLDNYAIEVS 2028



 Score = 79.7 bits (195), Expect = 2e-11
 Identities = 40/97 (41%), Positives = 59/97 (60%)
 Frame = -3

Query: 2094 YVSPRKALAQEHESKCMSLGKASVGALGGATRKSGRKERQGVAKHWKTLTFETFLKQVHM 1915
            YVSPR+AL  E +       +          RK+ RK+ Q   ++W  +TFETF+ +   
Sbjct: 1290 YVSPRRALLNEFQRGVCGCSRNQ------EERKAARKKGQ---ENWDFMTFETFILKCSN 1340

Query: 1914 VKPGMALIIDEIQLYPPGYLDLVCLLLVEGVHIYIGG 1804
            +  GMA+++DEIQLYPPGYLD++C L  +GVH+ + G
Sbjct: 1341 LPSGMAVVLDEIQLYPPGYLDMICYLTKKGVHLIVAG 1377


>emb|CAK54343.1| polyprotein, partial [Chrysanthemum virus B]
          Length = 2075

 Score = 1109 bits (2868), Expect = 0.0
 Identities = 551/628 (87%), Positives = 566/628 (90%), Gaps = 30/628 (4%)
 Frame = -1

Query: 1796 EQLLEGQSYKFNVQSHRFNNENFRGRLPCEITGKDGAEPYLEEHLLYTGCEELVQIMDEY 1617
            EQLLEGQSYKFNVQSHRFNNENFRGRLPCEITGK+ AE   EEHLLYTGCEELVQIMDEY
Sbjct: 1398 EQLLEGQSYKFNVQSHRFNNENFRGRLPCEITGKEVAESLSEEHLLYTGCEELVQIMDEY 1457

Query: 1616 SKVFLVSSFEEKKIIXXX------------------------------SAATSEKRWLTA 1527
            SK+FLVSSFEEKKII                                 SAATSEKRWLTA
Sbjct: 1458 SKIFLVSSFEEKKIIETHFPISEQRKVYTFGESTGLNFKVGTIIITNVSAATSEKRWLTA 1517

Query: 1526 LSRFSENICFVNLLGTDWSGLFGLYKHRALGHFLSKRAQLKDLLDHLPGQPQFQNGFSTL 1347
            LSRFSENICFVNLLGTDW+GLFGLYKHRALG FLSK+AQLKDLLDHLPGQPQFQNG STL
Sbjct: 1518 LSRFSENICFVNLLGTDWNGLFGLYKHRALGRFLSKQAQLKDLLDHLPGQPQFQNGLSTL 1577

Query: 1346 IGRDAGKREEKLIGDPWLKCMIDLGQTXXXXXXXXXXXXXXXEWFKTHLPQAELEGVRAR 1167
            IGRDAGKR+EKL+GDPWLKCMIDLGQ                EWFKTHLPQA+LEGVRAR
Sbjct: 1578 IGRDAGKRKEKLLGDPWLKCMIDLGQAEDAEEVELLEEVMQEEWFKTHLPQADLEGVRAR 1637

Query: 1166 WVHKIMLKEAREVRMGDIVSEQFTDDYPKELGINLTNAAERFETIYPRHRASDTVTFIMA 987
            WVHKIMLKEAREVRMG++VSEQFTDDYPKELG NLTNAAERFETIYPRHRASDTVTFIMA
Sbjct: 1638 WVHKIMLKEAREVRMGNMVSEQFTDDYPKELGTNLTNAAERFETIYPRHRASDTVTFIMA 1697

Query: 986  VKKRLRFSRPAVERAKLQEAKLYGKFLLGEFLKKVPLKQAHNATMMERAKFDFEEKKTSK 807
            VKKRLRFSRPAVE+AKLQEAKLYGKFLL EFLKKV LKQAHN TMMERAKFDFEEKKTSK
Sbjct: 1698 VKKRLRFSRPAVEKAKLQEAKLYGKFLLNEFLKKVSLKQAHNTTMMERAKFDFEEKKTSK 1757

Query: 806  SAAIIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAPY 627
            SAA IENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFR+AKAAQSIVCFQHAVLCRFAPY
Sbjct: 1758 SAATIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRIAKAAQSIVCFQHAVLCRFAPY 1817

Query: 626  MRYIEAKLHEALPSRFYIHSGKGLDELNEWVIKGKFEGVCTESDYEAFDASQDQYIVAFE 447
            MRYIEAKLHE LPSRFYIHSGKGL+ELNEWVIKGKFEG+CTESDYEAFDASQDQYIVAFE
Sbjct: 1818 MRYIEAKLHEVLPSRFYIHSGKGLEELNEWVIKGKFEGICTESDYEAFDASQDQYIVAFE 1877

Query: 446  LALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNI 267
            LALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNI
Sbjct: 1878 LALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNI 1937

Query: 266  KDSEHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCSDGIYKKP 87
            +DSEHICFAGDD+CASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLC DGIYKKP
Sbjct: 1938 RDSEHICFAGDDLCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCPDGIYKKP 1997

Query: 86   QLVLERMCIAKEKNNLANCLDNYAIEVS 3
            QLVLERMCIAKEKNNLANCLDNYAIEVS
Sbjct: 1998 QLVLERMCIAKEKNNLANCLDNYAIEVS 2025



 Score = 79.7 bits (195), Expect = 2e-11
 Identities = 40/97 (41%), Positives = 59/97 (60%)
 Frame = -3

Query: 2094 YVSPRKALAQEHESKCMSLGKASVGALGGATRKSGRKERQGVAKHWKTLTFETFLKQVHM 1915
            YVSPR+AL  E +       +          RK+ RK+ Q   ++W  +TFETF+ +   
Sbjct: 1287 YVSPRRALLNEFQRGVCGCSRNQ------EERKAARKKGQ---ENWDFMTFETFILKCSN 1337

Query: 1914 VKPGMALIIDEIQLYPPGYLDLVCLLLVEGVHIYIGG 1804
            +  GMA+++DEIQLYPPGYLD++C L  +GVH+ + G
Sbjct: 1338 LPSGMAVVLDEIQLYPPGYLDMICYLTKKGVHLIVAG 1374


>emb|CAJ41873.1| replicase, partial [Chrysanthemum virus B]
          Length = 702

 Score = 1102 bits (2849), Expect = 0.0
 Identities = 546/628 (86%), Positives = 562/628 (89%), Gaps = 30/628 (4%)
 Frame = -1

Query: 1796 EQLLEGQSYKFNVQSHRFNNENFRGRLPCEITGKDGAEPYLEEHLLYTGCEELVQIMDEY 1617
            EQLL+GQSYKFNVQSHRF NENFRGRLPCE+      E   EEHLLYTGCEELVQIM+EY
Sbjct: 25   EQLLDGQSYKFNVQSHRFRNENFRGRLPCEMIESGTVETLSEEHLLYTGCEELVQIMEEY 84

Query: 1616 SKVFLVSSFEEKKIIXXX------------------------------SAATSEKRWLTA 1527
            S+VFLVSSF+EKKII                                 SAATSEKRWLTA
Sbjct: 85   SRVFLVSSFDEKKIIETHFPMDEQRKVYTFGESTGLSFRVGTIIITNVSAATSEKRWLTA 144

Query: 1526 LSRFSENICFVNLLGTDWSGLFGLYKHRALGHFLSKRAQLKDLLDHLPGQPQFQNGFSTL 1347
            LSRFSENICFVNLLGTDW+GLFGLYKHRALGHFLSKRA LKDLLDHLPGQPQFQNGF+T 
Sbjct: 145  LSRFSENICFVNLLGTDWNGLFGLYKHRALGHFLSKRAHLKDLLDHLPGQPQFQNGFTTF 204

Query: 1346 IGRDAGKREEKLIGDPWLKCMIDLGQTXXXXXXXXXXXXXXXEWFKTHLPQAELEGVRAR 1167
            IG+DAGKREEKLIGDPWLKCMIDLGQ                EWFKTHLPQA+LEGVRAR
Sbjct: 205  IGKDAGKREEKLIGDPWLKCMIDLGQVEDVEEVEILEEVMQEEWFKTHLPQADLEGVRAR 264

Query: 1166 WVHKIMLKEAREVRMGDIVSEQFTDDYPKELGINLTNAAERFETIYPRHRASDTVTFIMA 987
            WVHKIMLKEAREVRMGDIVSEQFTDDYPK+LGINLTNAAERFETIYPRHRASDTVTFIMA
Sbjct: 265  WVHKIMLKEAREVRMGDIVSEQFTDDYPKDLGINLTNAAERFETIYPRHRASDTVTFIMA 324

Query: 986  VKKRLRFSRPAVERAKLQEAKLYGKFLLGEFLKKVPLKQAHNATMMERAKFDFEEKKTSK 807
            VKKRLRFSRPAVERAKLQEAKLYGKFLL EFLKK+PLKQAHNA MMERAKFDFEEKKTSK
Sbjct: 325  VKKRLRFSRPAVERAKLQEAKLYGKFLLNEFLKKIPLKQAHNAAMMERAKFDFEEKKTSK 384

Query: 806  SAAIIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAPY 627
            SAA IENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFR+AKAAQSIVCFQHAVLCRFAPY
Sbjct: 385  SAATIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRIAKAAQSIVCFQHAVLCRFAPY 444

Query: 626  MRYIEAKLHEALPSRFYIHSGKGLDELNEWVIKGKFEGVCTESDYEAFDASQDQYIVAFE 447
            MRYIEAKLHE LPSRFYIHSGKGL+ELNEWVIKGKFEG+CTESDYEAFDASQDQYIVAFE
Sbjct: 445  MRYIEAKLHEVLPSRFYIHSGKGLEELNEWVIKGKFEGICTESDYEAFDASQDQYIVAFE 504

Query: 446  LALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNI 267
            LALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNI
Sbjct: 505  LALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNI 564

Query: 266  KDSEHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCSDGIYKKP 87
            +DS HICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWH+CSDGIYKKP
Sbjct: 565  RDSAHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHVCSDGIYKKP 624

Query: 86   QLVLERMCIAKEKNNLANCLDNYAIEVS 3
            QLVLERMCIAKEKNNLANCLDNYAIEVS
Sbjct: 625  QLVLERMCIAKEKNNLANCLDNYAIEVS 652


>ref|YP_001086452.2| polyprotein [Chrysanthemum virus B]
 emb|CAM35753.2| polyprotein [Chrysanthemum virus B]
          Length = 2082

 Score = 1093 bits (2827), Expect = 0.0
 Identities = 549/628 (87%), Positives = 562/628 (89%), Gaps = 30/628 (4%)
 Frame = -1

Query: 1796 EQLLEGQSYKFNVQSHRFNNENFRGRLPCEITGKDGAEPYLEEHLLYTGCEELVQIMDEY 1617
            EQLLEGQSYKFNVQSHRFNNENFRGRLPCEIT K+ AEP LEEHLLYTGCEELV IMDEY
Sbjct: 1405 EQLLEGQSYKFNVQSHRFNNENFRGRLPCEITEKNVAEPRLEEHLLYTGCEELVLIMDEY 1464

Query: 1616 SKVFLVSSFEEKKIIXXX------------------------------SAATSEKRWLTA 1527
            SKVFLVSSFEEKKII                                 SAATSEKRWLTA
Sbjct: 1465 SKVFLVSSFEEKKIIETHFPVCEQRKVYTFGESTGLNFRVGTIIITNVSAATSEKRWLTA 1524

Query: 1526 LSRFSENICFVNLLGTDWSGLFGLYKHRALGHFLSKRAQLKDLLDHLPGQPQFQNGFSTL 1347
            LSRFS+N+CFVNLLGTDW+GLFGLYKHRALGHFLSKRAQLKDLLDHLPGQPQFQNGFSTL
Sbjct: 1525 LSRFSDNVCFVNLLGTDWNGLFGLYKHRALGHFLSKRAQLKDLLDHLPGQPQFQNGFSTL 1584

Query: 1346 IGRDAGKREEKLIGDPWLKCMIDLGQTXXXXXXXXXXXXXXXEWFKTHLPQAELEGVRAR 1167
            IG+DAGKREEKLIGDPWLKCMIDLGQT               EWFKTHLPQA+LEGVRAR
Sbjct: 1585 IGKDAGKREEKLIGDPWLKCMIDLGQTEDVEEVELLEEVMQEEWFKTHLPQADLEGVRAR 1644

Query: 1166 WVHKIMLKEAREVRMGDIVSEQFTDDYPKELGINLTNAAERFETIYPRHRASDTVTFIMA 987
            WVHKIMLKEAREVRMGDIVSEQFTDDYPKELG NLTNAAERFETIYPRHRASDTVTFIMA
Sbjct: 1645 WVHKIMLKEAREVRMGDIVSEQFTDDYPKELGTNLTNAAERFETIYPRHRASDTVTFIMA 1704

Query: 986  VKKRLRFSRPAVERAKLQEAKLYGKFLLGEFLKKVPLKQAHNATMMERAKFDFEEKKTSK 807
            VKKRLRFSRPAVE+AKLQEAKLYG+FLL EFLKKVPLKQAHN TMMERAKFDFEEKKTSK
Sbjct: 1705 VKKRLRFSRPAVEKAKLQEAKLYGQFLLNEFLKKVPLKQAHNTTMMERAKFDFEEKKTSK 1764

Query: 806  SAAIIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAPY 627
            SA IIENHAGRSCRDW+I+VGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAPY
Sbjct: 1765 SAVIIENHAGRSCRDWMIEVGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAPY 1824

Query: 626  MRYIEAKLHEALPSRFYIHSGKGLDELNEWVIKGKFEGVCTESDYEAFDASQDQYIVAFE 447
            MRYIEAKLHEALPSRFYIHSGKGLDELNEWVIKGKFEG+CTESDYEAFDASQDQYIVAFE
Sbjct: 1825 MRYIEAKLHEALPSRFYIHSGKGLDELNEWVIKGKFEGICTESDYEAFDASQDQYIVAFE 1884

Query: 446  LALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNI 267
            LALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMA MLFTFLRYNI
Sbjct: 1885 LALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMAIMLFTFLRYNI 1944

Query: 266  KDSEHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCSDGIYKKP 87
            KDSEHI   GDDMCASE  CIKKEHEGFL+KLKLKAKVFF+ KPT CGWHLCSDGIYKKP
Sbjct: 1945 KDSEHINSIGDDMCASEPPCIKKEHEGFLSKLKLKAKVFFLAKPTLCGWHLCSDGIYKKP 2004

Query: 86   QLVLERMCIAKEKNNLANCLDNYAIEVS 3
            QLVLERM  AKEKNNLANCLDNYAIEVS
Sbjct: 2005 QLVLERMGSAKEKNNLANCLDNYAIEVS 2032



 Score = 79.7 bits (195), Expect = 2e-11
 Identities = 40/97 (41%), Positives = 59/97 (60%)
 Frame = -3

Query: 2094 YVSPRKALAQEHESKCMSLGKASVGALGGATRKSGRKERQGVAKHWKTLTFETFLKQVHM 1915
            YVSPR+AL  E +       +          RK+ RK+ Q   ++W  +TFETF+ +   
Sbjct: 1294 YVSPRRALLNEFQRGVCGCSRNQ------EERKAARKKGQ---ENWDFMTFETFILKCSN 1344

Query: 1914 VKPGMALIIDEIQLYPPGYLDLVCLLLVEGVHIYIGG 1804
            +  GMA+++DEIQLYPPGYLD++C L  +GVH+ + G
Sbjct: 1345 LPSGMAVVLDEIQLYPPGYLDMICYLTKKGVHLIVAG 1381


>emb|CAK97712.1| polyprotein, partial [Chrysanthemum virus B]
          Length = 2079

 Score = 1093 bits (2827), Expect = 0.0
 Identities = 549/628 (87%), Positives = 562/628 (89%), Gaps = 30/628 (4%)
 Frame = -1

Query: 1796 EQLLEGQSYKFNVQSHRFNNENFRGRLPCEITGKDGAEPYLEEHLLYTGCEELVQIMDEY 1617
            EQLLEGQSYKFNVQSHRFNNENFRGRLPCEIT K+ AEP LEEHLLYTGCEELV IMDEY
Sbjct: 1402 EQLLEGQSYKFNVQSHRFNNENFRGRLPCEITEKNVAEPRLEEHLLYTGCEELVLIMDEY 1461

Query: 1616 SKVFLVSSFEEKKIIXXX------------------------------SAATSEKRWLTA 1527
            SKVFLVSSFEEKKII                                 SAATSEKRWLTA
Sbjct: 1462 SKVFLVSSFEEKKIIETHFPVCEQRKVYTFGESTGLNFRVGTIIITNVSAATSEKRWLTA 1521

Query: 1526 LSRFSENICFVNLLGTDWSGLFGLYKHRALGHFLSKRAQLKDLLDHLPGQPQFQNGFSTL 1347
            LSRFS+N+CFVNLLGTDW+GLFGLYKHRALGHFLSKRAQLKDLLDHLPGQPQFQNGFSTL
Sbjct: 1522 LSRFSDNVCFVNLLGTDWNGLFGLYKHRALGHFLSKRAQLKDLLDHLPGQPQFQNGFSTL 1581

Query: 1346 IGRDAGKREEKLIGDPWLKCMIDLGQTXXXXXXXXXXXXXXXEWFKTHLPQAELEGVRAR 1167
            IG+DAGKREEKLIGDPWLKCMIDLGQT               EWFKTHLPQA+LEGVRAR
Sbjct: 1582 IGKDAGKREEKLIGDPWLKCMIDLGQTEDVEEVELLEEVMQEEWFKTHLPQADLEGVRAR 1641

Query: 1166 WVHKIMLKEAREVRMGDIVSEQFTDDYPKELGINLTNAAERFETIYPRHRASDTVTFIMA 987
            WVHKIMLKEAREVRMGDIVSEQFTDDYPKELG NLTNAAERFETIYPRHRASDTVTFIMA
Sbjct: 1642 WVHKIMLKEAREVRMGDIVSEQFTDDYPKELGTNLTNAAERFETIYPRHRASDTVTFIMA 1701

Query: 986  VKKRLRFSRPAVERAKLQEAKLYGKFLLGEFLKKVPLKQAHNATMMERAKFDFEEKKTSK 807
            VKKRLRFSRPAVE+AKLQEAKLYG+FLL EFLKKVPLKQAHN TMMERAKFDFEEKKTSK
Sbjct: 1702 VKKRLRFSRPAVEKAKLQEAKLYGQFLLNEFLKKVPLKQAHNTTMMERAKFDFEEKKTSK 1761

Query: 806  SAAIIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAPY 627
            SA IIENHAGRSCRDW+I+VGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAPY
Sbjct: 1762 SAVIIENHAGRSCRDWMIEVGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAPY 1821

Query: 626  MRYIEAKLHEALPSRFYIHSGKGLDELNEWVIKGKFEGVCTESDYEAFDASQDQYIVAFE 447
            MRYIEAKLHEALPSRFYIHSGKGLDELNEWVIKGKFEG+CTESDYEAFDASQDQYIVAFE
Sbjct: 1822 MRYIEAKLHEALPSRFYIHSGKGLDELNEWVIKGKFEGICTESDYEAFDASQDQYIVAFE 1881

Query: 446  LALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNI 267
            LALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMA MLFTFLRYNI
Sbjct: 1882 LALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMAIMLFTFLRYNI 1941

Query: 266  KDSEHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCSDGIYKKP 87
            KDSEHI   GDDMCASE  CIKKEHEGFL+KLKLKAKVFF+ KPT CGWHLCSDGIYKKP
Sbjct: 1942 KDSEHINSIGDDMCASEPPCIKKEHEGFLSKLKLKAKVFFLAKPTLCGWHLCSDGIYKKP 2001

Query: 86   QLVLERMCIAKEKNNLANCLDNYAIEVS 3
            QLVLERM  AKEKNNLANCLDNYAIEVS
Sbjct: 2002 QLVLERMGSAKEKNNLANCLDNYAIEVS 2029



 Score = 79.7 bits (195), Expect = 2e-11
 Identities = 40/97 (41%), Positives = 59/97 (60%)
 Frame = -3

Query: 2094 YVSPRKALAQEHESKCMSLGKASVGALGGATRKSGRKERQGVAKHWKTLTFETFLKQVHM 1915
            YVSPR+AL  E +       +          RK+ RK+ Q   ++W  +TFETF+ +   
Sbjct: 1291 YVSPRRALLNEFQRGVCGCSRNQ------EERKAARKKGQ---ENWDFMTFETFILKCSN 1341

Query: 1914 VKPGMALIIDEIQLYPPGYLDLVCLLLVEGVHIYIGG 1804
            +  GMA+++DEIQLYPPGYLD++C L  +GVH+ + G
Sbjct: 1342 LPSGMAVVLDEIQLYPPGYLDMICYLTKKGVHLIVAG 1378


>emb|CAK54345.1| polyprotein, partial [Chrysanthemum virus B]
          Length = 2075

 Score = 1092 bits (2825), Expect = 0.0
 Identities = 546/639 (85%), Positives = 564/639 (88%), Gaps = 30/639 (4%)
 Frame = -1

Query: 1829 RGYIYI*GAXXEQLLEGQSYKFNVQSHRFNNENFRGRLPCEITGKDGAEPYLEEHLLYTG 1650
            R ++ +  +  EQLLEGQSY+FNVQSHRFNN NFRGRLPCE+ G D A    EEHLLYTG
Sbjct: 1387 RAWLSVMRSDVEQLLEGQSYRFNVQSHRFNNANFRGRLPCEMIGADVAGSPSEEHLLYTG 1446

Query: 1649 CEELVQIMDEYSKVFLVSSFEEKKIIXXX------------------------------S 1560
            CEELVQIMDEYSKVFLVSSF+EKKII                                 S
Sbjct: 1447 CEELVQIMDEYSKVFLVSSFDEKKIIETHFPMDEKRKVYTFGESTGLNFRVGTIIITNVS 1506

Query: 1559 AATSEKRWLTALSRFSENICFVNLLGTDWSGLFGLYKHRALGHFLSKRAQLKDLLDHLPG 1380
            AATSEKRWLTALSRFSENICFVNLLGTDW+GL GLYKHRALGHFL KRAQLKDLLDHLPG
Sbjct: 1507 AATSEKRWLTALSRFSENICFVNLLGTDWNGLLGLYKHRALGHFLCKRAQLKDLLDHLPG 1566

Query: 1379 QPQFQNGFSTLIGRDAGKREEKLIGDPWLKCMIDLGQTXXXXXXXXXXXXXXXEWFKTHL 1200
            QPQFQNGFSTLIG+DAGKR++KLIGDPWLKCMIDLGQT               EWFKTHL
Sbjct: 1567 QPQFQNGFSTLIGKDAGKRKDKLIGDPWLKCMIDLGQTEDVEEVELLEEVMQEEWFKTHL 1626

Query: 1199 PQAELEGVRARWVHKIMLKEAREVRMGDIVSEQFTDDYPKELGINLTNAAERFETIYPRH 1020
            PQA+LEGVRARWVHKIMLKEAREVRMGDIVSEQFTDDYPKELG NLTNAAERFETIYPRH
Sbjct: 1627 PQADLEGVRARWVHKIMLKEAREVRMGDIVSEQFTDDYPKELGTNLTNAAERFETIYPRH 1686

Query: 1019 RASDTVTFIMAVKKRLRFSRPAVERAKLQEAKLYGKFLLGEFLKKVPLKQAHNATMMERA 840
            RASDTVTFIMAVKKRLRFSRPAVE+AKLQEAKLYG+FLL EFLKKVPLKQAHN TMMERA
Sbjct: 1687 RASDTVTFIMAVKKRLRFSRPAVEKAKLQEAKLYGQFLLNEFLKKVPLKQAHNTTMMERA 1746

Query: 839  KFDFEEKKTSKSAAIIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRVAKAAQSIVCF 660
            KFDFEEKKTSKSAAIIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRVAKAAQSIVCF
Sbjct: 1747 KFDFEEKKTSKSAAIIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRVAKAAQSIVCF 1806

Query: 659  QHAVLCRFAPYMRYIEAKLHEALPSRFYIHSGKGLDELNEWVIKGKFEGVCTESDYEAFD 480
            QHAVLCRFAPYMRYIEAKLHE LPSRFYIHSGKGLDELNEWVIKGKFEG+CTESDYEAFD
Sbjct: 1807 QHAVLCRFAPYMRYIEAKLHEVLPSRFYIHSGKGLDELNEWVIKGKFEGICTESDYEAFD 1866

Query: 479  ASQDQYIVAFELALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMA 300
            AS DQYIVAFELALMEYLGLPRDL+EDYAFIK HLGS L NFAIMRFSGEASTFLFNTMA
Sbjct: 1867 ASTDQYIVAFELALMEYLGLPRDLMEDYAFIKFHLGSNLPNFAIMRFSGEASTFLFNTMA 1926

Query: 299  NMLFTFLRYNIKDSEHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGW 120
            NMLF FLRYNI+DS HICFAGDDMCASERLCIKK+HEGFLNKLKLKAKVFFVDKPTFCGW
Sbjct: 1927 NMLFPFLRYNIRDSAHICFAGDDMCASERLCIKKDHEGFLNKLKLKAKVFFVDKPTFCGW 1986

Query: 119  HLCSDGIYKKPQLVLERMCIAKEKNNLANCLDNYAIEVS 3
            HLC DGIYKKPQLVLERMCIAKEKNNLANCLDNYAIEVS
Sbjct: 1987 HLCPDGIYKKPQLVLERMCIAKEKNNLANCLDNYAIEVS 2025



 Score = 79.7 bits (195), Expect = 2e-11
 Identities = 40/97 (41%), Positives = 59/97 (60%)
 Frame = -3

Query: 2094 YVSPRKALAQEHESKCMSLGKASVGALGGATRKSGRKERQGVAKHWKTLTFETFLKQVHM 1915
            YVSPR+AL  E +       +          RK+ RK+ Q   ++W  +TFETF+ +   
Sbjct: 1287 YVSPRRALLNEFQRGVCGCSRNQ------EERKAARKKGQ---ENWDFMTFETFILKCSN 1337

Query: 1914 VKPGMALIIDEIQLYPPGYLDLVCLLLVEGVHIYIGG 1804
            +  GMA+++DEIQLYPPGYLD++C L  +GVH+ + G
Sbjct: 1338 LPSGMAVVLDEIQLYPPGYLDMICYLTKKGVHLIVAG 1374


>emb|CAO78694.1| polyprotein [Chrysanthemum virus B]
          Length = 2079

 Score = 1088 bits (2815), Expect = 0.0
 Identities = 540/628 (85%), Positives = 562/628 (89%), Gaps = 30/628 (4%)
 Frame = -1

Query: 1796 EQLLEGQSYKFNVQSHRFNNENFRGRLPCEITGKDGAEPYLEEHLLYTGCEELVQIMDEY 1617
            EQLLEGQSYKFNVQSHRF+NENFRGRLPCE+TGK+ +E  LEEHLLYTGCEELVQIMDEY
Sbjct: 1402 EQLLEGQSYKFNVQSHRFSNENFRGRLPCEMTGKEVSEVPLEEHLLYTGCEELVQIMDEY 1461

Query: 1616 SKVFLVSSFEEKKIIXXX------------------------------SAATSEKRWLTA 1527
            SK+FLVSSFEEKKII                                 SAATSEKRWLTA
Sbjct: 1462 SKIFLVSSFEEKKIIETHFPMSEQRKVYTFGESTGLNFKVGTIIITNVSAATSEKRWLTA 1521

Query: 1526 LSRFSENICFVNLLGTDWSGLFGLYKHRALGHFLSKRAQLKDLLDHLPGQPQFQNGFSTL 1347
            LSRFSENICFVNLLGTDW+GLFGLYKHRALG FLSK+AQL DLL+HLPGQPQFQNGFSTL
Sbjct: 1522 LSRFSENICFVNLLGTDWNGLFGLYKHRALGRFLSKKAQLNDLLEHLPGQPQFQNGFSTL 1581

Query: 1346 IGRDAGKREEKLIGDPWLKCMIDLGQTXXXXXXXXXXXXXXXEWFKTHLPQAELEGVRAR 1167
            IGRDAGKRE+KLIGDPWLKCMIDLGQT               EWFKTHLPQ +LEGV AR
Sbjct: 1582 IGRDAGKREDKLIGDPWLKCMIDLGQTEDVEEVELLEEVMQEEWFKTHLPQPDLEGVPAR 1641

Query: 1166 WVHKIMLKEAREVRMGDIVSEQFTDDYPKELGINLTNAAERFETIYPRHRASDTVTFIMA 987
            WVHKIMLKEAREVRMGDIVS+QFT+DYPK+LG NLTN AERFETIYPRHRASD VTF+MA
Sbjct: 1642 WVHKIMLKEAREVRMGDIVSDQFTEDYPKDLGTNLTNEAERFETIYPRHRASDPVTFLMA 1701

Query: 986  VKKRLRFSRPAVERAKLQEAKLYGKFLLGEFLKKVPLKQAHNATMMERAKFDFEEKKTSK 807
            VKKRLRFSRPAVE+A LQ AKLYGKFL+ EFLKKVPLKQAHNA MMERAKFDFEEKKTSK
Sbjct: 1702 VKKRLRFSRPAVEKAILQGAKLYGKFLINEFLKKVPLKQAHNAAMMERAKFDFEEKKTSK 1761

Query: 806  SAAIIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAPY 627
            SAA IENHAGRSCR+WLIDVGLIFSKSQLCTKFDNRFRV KAAQSIVCFQHAVLCRFAPY
Sbjct: 1762 SAATIENHAGRSCRNWLIDVGLIFSKSQLCTKFDNRFRVVKAAQSIVCFQHAVLCRFAPY 1821

Query: 626  MRYIEAKLHEALPSRFYIHSGKGLDELNEWVIKGKFEGVCTESDYEAFDASQDQYIVAFE 447
            MRYIEAKLHEALPSRFYIHSGKGL+ LNEWVIKG+FEG+CTESDYEAFDASQDQYIVAFE
Sbjct: 1822 MRYIEAKLHEALPSRFYIHSGKGLEALNEWVIKGRFEGICTESDYEAFDASQDQYIVAFE 1881

Query: 446  LALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNI 267
            LALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNI
Sbjct: 1882 LALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNI 1941

Query: 266  KDSEHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCSDGIYKKP 87
            +DS HICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWH+CSDGIYKKP
Sbjct: 1942 RDSAHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHVCSDGIYKKP 2001

Query: 86   QLVLERMCIAKEKNNLANCLDNYAIEVS 3
            QLVLERMCIAKEKNNLANCLDNYAIEVS
Sbjct: 2002 QLVLERMCIAKEKNNLANCLDNYAIEVS 2029



 Score = 79.7 bits (195), Expect = 2e-11
 Identities = 40/97 (41%), Positives = 59/97 (60%)
 Frame = -3

Query: 2094 YVSPRKALAQEHESKCMSLGKASVGALGGATRKSGRKERQGVAKHWKTLTFETFLKQVHM 1915
            YVSPR+AL  E +       +          RK+ RK+ Q   ++W  +TFETF+ +   
Sbjct: 1291 YVSPRRALLNEFQRGVCGCSRNQ------EERKAARKKGQ---ENWDFMTFETFILKCSN 1341

Query: 1914 VKPGMALIIDEIQLYPPGYLDLVCLLLVEGVHIYIGG 1804
            +  GMA+++DEIQLYPPGYLD++C L  +GVH+ + G
Sbjct: 1342 LPSGMAVVLDEIQLYPPGYLDMICYLTKKGVHLIVAG 1378


>emb|CAK54342.1| polyprotein, partial [Chrysanthemum virus B]
          Length = 2076

 Score = 1088 bits (2815), Expect = 0.0
 Identities = 540/628 (85%), Positives = 562/628 (89%), Gaps = 30/628 (4%)
 Frame = -1

Query: 1796 EQLLEGQSYKFNVQSHRFNNENFRGRLPCEITGKDGAEPYLEEHLLYTGCEELVQIMDEY 1617
            EQLLEGQSYKFNVQSHRF+NENFRGRLPCE+TGK+ +E  LEEHLLYTGCEELVQIMDEY
Sbjct: 1399 EQLLEGQSYKFNVQSHRFSNENFRGRLPCEMTGKEVSEVPLEEHLLYTGCEELVQIMDEY 1458

Query: 1616 SKVFLVSSFEEKKIIXXX------------------------------SAATSEKRWLTA 1527
            SK+FLVSSFEEKKII                                 SAATSEKRWLTA
Sbjct: 1459 SKIFLVSSFEEKKIIETHFPMSEQRKVYTFGESTGLNFKVGTIIITNVSAATSEKRWLTA 1518

Query: 1526 LSRFSENICFVNLLGTDWSGLFGLYKHRALGHFLSKRAQLKDLLDHLPGQPQFQNGFSTL 1347
            LSRFSENICFVNLLGTDW+GLFGLYKHRALG FLSK+AQL DLL+HLPGQPQFQNGFSTL
Sbjct: 1519 LSRFSENICFVNLLGTDWNGLFGLYKHRALGRFLSKKAQLNDLLEHLPGQPQFQNGFSTL 1578

Query: 1346 IGRDAGKREEKLIGDPWLKCMIDLGQTXXXXXXXXXXXXXXXEWFKTHLPQAELEGVRAR 1167
            IGRDAGKRE+KLIGDPWLKCMIDLGQT               EWFKTHLPQ +LEGV AR
Sbjct: 1579 IGRDAGKREDKLIGDPWLKCMIDLGQTEDVEEVELLEEVMQEEWFKTHLPQPDLEGVPAR 1638

Query: 1166 WVHKIMLKEAREVRMGDIVSEQFTDDYPKELGINLTNAAERFETIYPRHRASDTVTFIMA 987
            WVHKIMLKEAREVRMGDIVS+QFT+DYPK+LG NLTN AERFETIYPRHRASD VTF+MA
Sbjct: 1639 WVHKIMLKEAREVRMGDIVSDQFTEDYPKDLGTNLTNEAERFETIYPRHRASDPVTFLMA 1698

Query: 986  VKKRLRFSRPAVERAKLQEAKLYGKFLLGEFLKKVPLKQAHNATMMERAKFDFEEKKTSK 807
            VKKRLRFSRPAVE+A LQ AKLYGKFL+ EFLKKVPLKQAHNA MMERAKFDFEEKKTSK
Sbjct: 1699 VKKRLRFSRPAVEKAILQGAKLYGKFLINEFLKKVPLKQAHNAAMMERAKFDFEEKKTSK 1758

Query: 806  SAAIIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAPY 627
            SAA IENHAGRSCR+WLIDVGLIFSKSQLCTKFDNRFRV KAAQSIVCFQHAVLCRFAPY
Sbjct: 1759 SAATIENHAGRSCRNWLIDVGLIFSKSQLCTKFDNRFRVVKAAQSIVCFQHAVLCRFAPY 1818

Query: 626  MRYIEAKLHEALPSRFYIHSGKGLDELNEWVIKGKFEGVCTESDYEAFDASQDQYIVAFE 447
            MRYIEAKLHEALPSRFYIHSGKGL+ LNEWVIKG+FEG+CTESDYEAFDASQDQYIVAFE
Sbjct: 1819 MRYIEAKLHEALPSRFYIHSGKGLEALNEWVIKGRFEGICTESDYEAFDASQDQYIVAFE 1878

Query: 446  LALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNI 267
            LALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNI
Sbjct: 1879 LALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNI 1938

Query: 266  KDSEHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCSDGIYKKP 87
            +DS HICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWH+CSDGIYKKP
Sbjct: 1939 RDSAHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHVCSDGIYKKP 1998

Query: 86   QLVLERMCIAKEKNNLANCLDNYAIEVS 3
            QLVLERMCIAKEKNNLANCLDNYAIEVS
Sbjct: 1999 QLVLERMCIAKEKNNLANCLDNYAIEVS 2026



 Score = 79.7 bits (195), Expect = 2e-11
 Identities = 40/97 (41%), Positives = 59/97 (60%)
 Frame = -3

Query: 2094 YVSPRKALAQEHESKCMSLGKASVGALGGATRKSGRKERQGVAKHWKTLTFETFLKQVHM 1915
            YVSPR+AL  E +       +          RK+ RK+ Q   ++W  +TFETF+ +   
Sbjct: 1288 YVSPRRALLNEFQRGVCGCSRNQ------EERKAARKKGQ---ENWDFMTFETFILKCSN 1338

Query: 1914 VKPGMALIIDEIQLYPPGYLDLVCLLLVEGVHIYIGG 1804
            +  GMA+++DEIQLYPPGYLD++C L  +GVH+ + G
Sbjct: 1339 LPSGMAVVLDEIQLYPPGYLDMICYLTKKGVHLIVAG 1375


>emb|CAO78682.1| polyprotein [Chrysanthemum virus B]
          Length = 2079

 Score = 1034 bits (2673), Expect = 0.0
 Identities = 521/628 (82%), Positives = 541/628 (86%), Gaps = 30/628 (4%)
 Frame = -1

Query: 1796 EQLLEGQSYKFNVQSHRFNNENFRGRLPCEITGKDGAEPYLEEHLLYTGCEELVQIMDEY 1617
            EQLL+GQSYKFNVQSHRF NENFRGRLPCE+      E   EEHLLYTGCEELVQIM+EY
Sbjct: 1402 EQLLDGQSYKFNVQSHRFKNENFRGRLPCEMIESGSVEMLSEEHLLYTGCEELVQIMEEY 1461

Query: 1616 SKVFLVSSFEEKKIIXXX------------------------------SAATSEKRWLTA 1527
            S+VFLVSSF+EKKII                                 SAATSEK WLTA
Sbjct: 1462 SRVFLVSSFDEKKIIETHFPMDEQRKVYTFGESTGVSFRVGTIIITDVSAATSEKHWLTA 1521

Query: 1526 LSRFSENICFVNLLGTDWSGLFGLYKHRALGHFLSKRAQLKDLLDHLPGQPQFQNGFSTL 1347
            LSRFSENICFVNLL TDW+GLF LYKHRALGHFLS+RAQLKDLLDHLPGQPQ Q+G S L
Sbjct: 1522 LSRFSENICFVNLLNTDWNGLFELYKHRALGHFLSQRAQLKDLLDHLPGQPQLQSGLSRL 1581

Query: 1346 IGRDAGKREEKLIGDPWLKCMIDLGQTXXXXXXXXXXXXXXXEWFKTHLPQAELEGVRAR 1167
            IGRDAGKR+EKLIG P LKCMI LG+                +   T L +  LEGVRAR
Sbjct: 1582 IGRDAGKRKEKLIGGPLLKCMIVLGRGEDAQEVYLLEEVMQEDLIVTRLHETVLEGVRAR 1641

Query: 1166 WVHKIMLKEAREVRMGDIVSEQFTDDYPKELGINLTNAAERFETIYPRHRASDTVTFIMA 987
               KIM  EAREVRMGDIVSEQFTDDYPK+LG+NLTNAAERFETIYPRHRASDTVTFIMA
Sbjct: 1642 GGIKIMSNEAREVRMGDIVSEQFTDDYPKDLGVNLTNAAERFETIYPRHRASDTVTFIMA 1701

Query: 986  VKKRLRFSRPAVERAKLQEAKLYGKFLLGEFLKKVPLKQAHNATMMERAKFDFEEKKTSK 807
            VKKRLRFSRPAVERAKLQEAKLYGKFLL EFLKK+PLKQAHNA MMERAKFDFEEKKTSK
Sbjct: 1702 VKKRLRFSRPAVERAKLQEAKLYGKFLLNEFLKKIPLKQAHNAAMMERAKFDFEEKKTSK 1761

Query: 806  SAAIIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAPY 627
            SAA IENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAPY
Sbjct: 1762 SAATIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAPY 1821

Query: 626  MRYIEAKLHEALPSRFYIHSGKGLDELNEWVIKGKFEGVCTESDYEAFDASQDQYIVAFE 447
            MRY EAKLHE LPSRFYIHSGKGL+ELNEWVIKGKFEG+CTESDYEAFDASQDQY+VAFE
Sbjct: 1822 MRYNEAKLHEVLPSRFYIHSGKGLEELNEWVIKGKFEGICTESDYEAFDASQDQYVVAFE 1881

Query: 446  LALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNI 267
            LALMEYLGLPRDLIEDYAFIKCH GSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNI
Sbjct: 1882 LALMEYLGLPRDLIEDYAFIKCHFGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNI 1941

Query: 266  KDSEHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCSDGIYKKP 87
            +D+EHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLC DGIYKKP
Sbjct: 1942 RDNEHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCPDGIYKKP 2001

Query: 86   QLVLERMCIAKEKNNLANCLDNYAIEVS 3
            QLVLERMCIAKEKNNLANCLDNYAIEVS
Sbjct: 2002 QLVLERMCIAKEKNNLANCLDNYAIEVS 2029



 Score = 79.7 bits (195), Expect = 2e-11
 Identities = 40/97 (41%), Positives = 59/97 (60%)
 Frame = -3

Query: 2094 YVSPRKALAQEHESKCMSLGKASVGALGGATRKSGRKERQGVAKHWKTLTFETFLKQVHM 1915
            YVSPR+AL  E +       +          RK+ RK+ Q   ++W  +TFETF+ +   
Sbjct: 1291 YVSPRRALLNEFQRGVCGCSRNQ------EERKAARKKGQ---ENWDFMTFETFILKCSN 1341

Query: 1914 VKPGMALIIDEIQLYPPGYLDLVCLLLVEGVHIYIGG 1804
            +  GMA+++DEIQLYPPGYLD++C L  +GVH+ + G
Sbjct: 1342 LPSGMAVVLDEIQLYPPGYLDMICYLTKKGVHLIVAG 1378


>emb|CAK54344.1| polyprotein, partial [Chrysanthemum virus B]
          Length = 2076

 Score = 1034 bits (2673), Expect = 0.0
 Identities = 521/628 (82%), Positives = 541/628 (86%), Gaps = 30/628 (4%)
 Frame = -1

Query: 1796 EQLLEGQSYKFNVQSHRFNNENFRGRLPCEITGKDGAEPYLEEHLLYTGCEELVQIMDEY 1617
            EQLL+GQSYKFNVQSHRF NENFRGRLPCE+      E   EEHLLYTGCEELVQIM+EY
Sbjct: 1399 EQLLDGQSYKFNVQSHRFKNENFRGRLPCEMIESGSVEMLSEEHLLYTGCEELVQIMEEY 1458

Query: 1616 SKVFLVSSFEEKKIIXXX------------------------------SAATSEKRWLTA 1527
            S+VFLVSSF+EKKII                                 SAATSEK WLTA
Sbjct: 1459 SRVFLVSSFDEKKIIETHFPMDEQRKVYTFGESTGVSFRVGTIIITDVSAATSEKHWLTA 1518

Query: 1526 LSRFSENICFVNLLGTDWSGLFGLYKHRALGHFLSKRAQLKDLLDHLPGQPQFQNGFSTL 1347
            LSRFSENICFVNLL TDW+GLF LYKHRALGHFLS+RAQLKDLLDHLPGQPQ Q+G S L
Sbjct: 1519 LSRFSENICFVNLLNTDWNGLFELYKHRALGHFLSQRAQLKDLLDHLPGQPQLQSGLSRL 1578

Query: 1346 IGRDAGKREEKLIGDPWLKCMIDLGQTXXXXXXXXXXXXXXXEWFKTHLPQAELEGVRAR 1167
            IGRDAGKR+EKLIG P LKCMI LG+                +   T L +  LEGVRAR
Sbjct: 1579 IGRDAGKRKEKLIGGPLLKCMIVLGRGEDAQEVYLLEEVMQEDLIVTRLHETVLEGVRAR 1638

Query: 1166 WVHKIMLKEAREVRMGDIVSEQFTDDYPKELGINLTNAAERFETIYPRHRASDTVTFIMA 987
               KIM  EAREVRMGDIVSEQFTDDYPK+LG+NLTNAAERFETIYPRHRASDTVTFIMA
Sbjct: 1639 GGIKIMSNEAREVRMGDIVSEQFTDDYPKDLGVNLTNAAERFETIYPRHRASDTVTFIMA 1698

Query: 986  VKKRLRFSRPAVERAKLQEAKLYGKFLLGEFLKKVPLKQAHNATMMERAKFDFEEKKTSK 807
            VKKRLRFSRPAVERAKLQEAKLYGKFLL EFLKK+PLKQAHNA MMERAKFDFEEKKTSK
Sbjct: 1699 VKKRLRFSRPAVERAKLQEAKLYGKFLLNEFLKKIPLKQAHNAAMMERAKFDFEEKKTSK 1758

Query: 806  SAAIIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAPY 627
            SAA IENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAPY
Sbjct: 1759 SAATIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAPY 1818

Query: 626  MRYIEAKLHEALPSRFYIHSGKGLDELNEWVIKGKFEGVCTESDYEAFDASQDQYIVAFE 447
            MRY EAKLHE LPSRFYIHSGKGL+ELNEWVIKGKFEG+CTESDYEAFDASQDQY+VAFE
Sbjct: 1819 MRYNEAKLHEVLPSRFYIHSGKGLEELNEWVIKGKFEGICTESDYEAFDASQDQYVVAFE 1878

Query: 446  LALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNI 267
            LALMEYLGLPRDLIEDYAFIKCH GSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNI
Sbjct: 1879 LALMEYLGLPRDLIEDYAFIKCHFGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNI 1938

Query: 266  KDSEHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCSDGIYKKP 87
            +D+EHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLC DGIYKKP
Sbjct: 1939 RDNEHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCPDGIYKKP 1998

Query: 86   QLVLERMCIAKEKNNLANCLDNYAIEVS 3
            QLVLERMCIAKEKNNLANCLDNYAIEVS
Sbjct: 1999 QLVLERMCIAKEKNNLANCLDNYAIEVS 2026



 Score = 79.7 bits (195), Expect = 2e-11
 Identities = 40/97 (41%), Positives = 59/97 (60%)
 Frame = -3

Query: 2094 YVSPRKALAQEHESKCMSLGKASVGALGGATRKSGRKERQGVAKHWKTLTFETFLKQVHM 1915
            YVSPR+AL  E +       +          RK+ RK+ Q   ++W  +TFETF+ +   
Sbjct: 1288 YVSPRRALLNEFQRGVCGCSRNQ------EERKAARKKGQ---ENWDFMTFETFILKCSN 1338

Query: 1914 VKPGMALIIDEIQLYPPGYLDLVCLLLVEGVHIYIGG 1804
            +  GMA+++DEIQLYPPGYLD++C L  +GVH+ + G
Sbjct: 1339 LPSGMAVVLDEIQLYPPGYLDMICYLTKKGVHLIVAG 1375


>gb|AKZ66614.1| replicase [Atractylodes mottle virus]
          Length = 2036

 Score =  883 bits (2281), Expect = 0.0
 Identities = 445/640 (69%), Positives = 501/640 (78%), Gaps = 31/640 (4%)
 Frame = -1

Query: 1829 RGYIYI*GAXXEQLLEGQSYKFNVQSHRFNNENFRGRLPCEITGKDGAEPYLEE-HLLYT 1653
            R ++   G+  ++LL  Q+YKFN  S RF N NF GRLPC +      EP  EE HLL+T
Sbjct: 1347 RAWLGTMGSDVDRLLGDQTYKFNTCSQRFKNSNFVGRLPCALFENKNPEPQSEEAHLLFT 1406

Query: 1652 GCEELVQIMDEYSKVFLVSSFEEKKI------------------------------IXXX 1563
            GC+ELVQ+  EY +VFLVSSFEEKKI                              I   
Sbjct: 1407 GCDELVQLEPEYCEVFLVSSFEEKKIVETHFPNVANKAILTFGESTGLNYKKGTILITNV 1466

Query: 1562 SAATSEKRWLTALSRFSENICFVNLLGTDWSGLFGLYKHRALGHFLSKRAQLKDLLDHLP 1383
            S+ T+E+RW+TALSRFS N+C VNL+G DW+G+   Y+ R LG FL++ A+  DL + LP
Sbjct: 1467 SSYTNERRWVTALSRFSSNVCLVNLVGVDWNGIAMAYRGRVLGRFLARTAKTLDLCELLP 1526

Query: 1382 GQPQFQNGFSTLIGRDAGKREEKLIGDPWLKCMIDLGQTXXXXXXXXXXXXXXXEWFKTH 1203
            G+P+F  GF + +G+D G RE KL GDPWLKCMIDLGQT               EWFKTH
Sbjct: 1527 GKPEFVMGFQSHVGKDEGVREAKLEGDPWLKCMIDLGQTEDVEEVEDLQEVMQEEWFKTH 1586

Query: 1202 LPQAELEGVRARWVHKIMLKEAREVRMGDIVSEQFTDDYPKELGINLTNAAERFETIYPR 1023
            LPQAELE VRARWVH+ + KE REVRMG +VSEQFTD+Y KE G+ LTNAAERFE IYPR
Sbjct: 1587 LPQAELESVRARWVHRFLAKEKREVRMGSMVSEQFTDEYAKEGGLILTNAAERFEAIYPR 1646

Query: 1022 HRASDTVTFIMAVKKRLRFSRPAVERAKLQEAKLYGKFLLGEFLKKVPLKQAHNATMMER 843
            HRA+DTVTFIMAVKKRLRFSRPAVE+AKL EA+LYG+FLL EF KKVPL    +  MME+
Sbjct: 1647 HRANDTVTFIMAVKKRLRFSRPAVEQAKLNEAELYGEFLLREFCKKVPLNGMKDERMMEQ 1706

Query: 842  AKFDFEEKKTSKSAAIIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRVAKAAQSIVC 663
            AK  FEEKK SKSAAIIENHAGRSCRDWL+D+G IFSKSQLCTKFDNRFRVAKAAQSIVC
Sbjct: 1707 AKRAFEEKKVSKSAAIIENHAGRSCRDWLLDIGQIFSKSQLCTKFDNRFRVAKAAQSIVC 1766

Query: 662  FQHAVLCRFAPYMRYIEAKLHEALPSRFYIHSGKGLDELNEWVIKGKFEGVCTESDYEAF 483
            FQHAVLCRFAPY+RYIEAKL+EALP  FYIHSGKGL+EL EWVIKGKF G+CTESDYEAF
Sbjct: 1767 FQHAVLCRFAPYIRYIEAKLNEALPKNFYIHSGKGLEELQEWVIKGKFSGICTESDYEAF 1826

Query: 482  DASQDQYIVAFELALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTM 303
            DASQDQYIVAFE+A+M  LGLP  LI DY FIK HLGSKLGNFAIMRFSGEASTFLFNTM
Sbjct: 1827 DASQDQYIVAFEVAVMRKLGLPESLISDYKFIKTHLGSKLGNFAIMRFSGEASTFLFNTM 1886

Query: 302  ANMLFTFLRYNIKDSEHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCG 123
            ANMLFTFLRY++K  E+ICFAGDDMCASERL ++ EH+GFL KLKLKAKVF V+KPTFCG
Sbjct: 1887 ANMLFTFLRYDLKGREYICFAGDDMCASERLPLRHEHDGFLKKLKLKAKVFMVEKPTFCG 1946

Query: 122  WHLCSDGIYKKPQLVLERMCIAKEKNNLANCLDNYAIEVS 3
            WHLC DGIYKKPQLVLERM IAKEKNNLANCLDNYAIEV+
Sbjct: 1947 WHLCPDGIYKKPQLVLERMLIAKEKNNLANCLDNYAIEVA 1986



 Score =  123 bits (309), Expect = 4e-25
 Identities = 64/98 (65%), Positives = 72/98 (73%)
 Frame = -3

Query: 2097 FYVSPRKALAQEHESKCMSLGKASVGALGGATRKSGRKERQGVAKHWKTLTFETFLKQVH 1918
            FYVSPRKALA EHE KC+   +  V    G  RK  R+   G  K+W TLTFE FLKQVH
Sbjct: 1241 FYVSPRKALAVEHERKCIGGQRTDVNDAAG--RKKNRRPPHG--KNWHTLTFEKFLKQVH 1296

Query: 1917 MVKPGMALIIDEIQLYPPGYLDLVCLLLVEGVHIYIGG 1804
            +VKP MALIIDEIQLYPPGYLDL  LL+ +GVHI+IGG
Sbjct: 1297 LVKPRMALIIDEIQLYPPGYLDLALLLIAKGVHIFIGG 1334


>ref|YP_009022064.1| replicase [Gaillardia latent virus]
 gb|AHN84511.1| replicase [Gaillardia latent virus]
          Length = 1990

 Score =  859 bits (2219), Expect = 0.0
 Identities = 432/627 (68%), Positives = 487/627 (77%), Gaps = 29/627 (4%)
 Frame = -1

Query: 1796 EQLLEGQSYKFNVQSHRFNNENFRGRLPCEITGKDGAEPYLEEHLLYTGCEELVQIMDEY 1617
            E+LL+GQ YK+N  S RF N+NF  RL C+ T     E   E HLLYTG +E+VQI DEY
Sbjct: 1317 ERLLKGQKYKYNGLSRRFVNKNFSSRLHCQFTEDRLTEE--EPHLLYTGLDEMVQIEDEY 1374

Query: 1616 SKVFLVSSFEEKKI-----------------------------IXXXSAATSEKRWLTAL 1524
             +VFLVSSFEEKKI                             I   SA TSEKRW+TAL
Sbjct: 1375 KEVFLVSSFEEKKIVSAHFDVKSEAILTFGESTGLNFKRGVIIITNVSALTSEKRWVTAL 1434

Query: 1523 SRFSENICFVNLLGTDWSGLFGLYKHRALGHFLSKRAQLKDLLDHLPGQPQFQNGFSTLI 1344
            SRFS N+C VNL+G DWS L  +Y  R L +FL  ++    LL+ LPG+P    GF   I
Sbjct: 1435 SRFSTNVCLVNLVGVDWSTLAKVYVERTLANFLCAQSHQGKLLELLPGEPHITAGFPDKI 1494

Query: 1343 GRDAGKREEKLIGDPWLKCMIDLGQTXXXXXXXXXXXXXXXEWFKTHLPQAELEGVRARW 1164
            G+D G REEK+ GDPWL+ MIDL Q                EWFKTHLP+ ELE VRARW
Sbjct: 1495 GKDEGLREEKMQGDPWLEGMIDLFQIEDVEEVEEQFEELQXEWFKTHLPREELESVRARW 1554

Query: 1163 VHKIMLKEAREVRMGDIVSEQFTDDYPKELGINLTNAAERFETIYPRHRASDTVTFIMAV 984
            VHK++ KE REVRMG + SEQFTD+YPK+ G+NLTN AERFETIYPRHRA+D+VTF+MAV
Sbjct: 1555 VHKLLAKEFREVRMGYLTSEQFTDEYPKDAGVNLTNQAERFETIYPRHRANDSVTFLMAV 1614

Query: 983  KKRLRFSRPAVERAKLQEAKLYGKFLLGEFLKKVPLKQAHNATMMERAKFDFEEKKTSKS 804
            KKRLRFSRPA E+ KL EA  YG+F+L EFL KVPLK+ H+  MM +AK +FE+KKTSKS
Sbjct: 1615 KKRLRFSRPAKEKCKLIEASSYGRFMLNEFLDKVPLKRKHDPIMMAQAKKEFEDKKTSKS 1674

Query: 803  AAIIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAPYM 624
            AA IENH+GRSCRDWLID+GL+FSKSQLCTKFD+RFRVAKAAQSIVCFQH VLCRFAPYM
Sbjct: 1675 AATIENHSGRSCRDWLIDIGLVFSKSQLCTKFDSRFRVAKAAQSIVCFQHEVLCRFAPYM 1734

Query: 623  RYIEAKLHEALPSRFYIHSGKGLDELNEWVIKGKFEGVCTESDYEAFDASQDQYIVAFEL 444
            RYIE KLHE LP R+YIHSGKGLDELN+WV KG+F G+CTESDYEAFDASQDQY+VAFE+
Sbjct: 1735 RYIEKKLHEVLPERYYIHSGKGLDELNDWVKKGRFSGICTESDYEAFDASQDQYMVAFEV 1794

Query: 443  ALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNIK 264
             +M YLGLP DLIEDY FIK HLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFL+Y IK
Sbjct: 1795 EVMRYLGLPNDLIEDYKFIKTHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLKYEIK 1854

Query: 263  DSEHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCSDGIYKKPQ 84
              E ICFAGDDMCASERL +KK+HE FL KLKLKAKVF VDKPTFCGW+LC DGIYKKPQ
Sbjct: 1855 GHEFICFAGDDMCASERLALKKQHESFLGKLKLKAKVFMVDKPTFCGWNLCPDGIYKKPQ 1914

Query: 83   LVLERMCIAKEKNNLANCLDNYAIEVS 3
            LV+ERMCIAKEK NLANC+DNYAIEVS
Sbjct: 1915 LVMERMCIAKEKANLANCIDNYAIEVS 1941



 Score = 94.4 bits (233), Expect = 5e-16
 Identities = 52/98 (53%), Positives = 64/98 (65%)
 Frame = -3

Query: 2097 FYVSPRKALAQEHESKCMSLGKASVGALGGATRKSGRKERQGVAKHWKTLTFETFLKQVH 1918
            FYVSPRKALA+E  SK +S             R+ GR ++    K+W   TFE FLK+ H
Sbjct: 1210 FYVSPRKALAEEFRSKTLS-------------RQVGRLDKIK-EKNWLLCTFEVFLKKHH 1255

Query: 1917 MVKPGMALIIDEIQLYPPGYLDLVCLLLVEGVHIYIGG 1804
            +VKPGMA+IIDE+QLYPPGYLDL  LL  +GV   +GG
Sbjct: 1256 LVKPGMAVIIDELQLYPPGYLDLTMLLCPKGVLFLVGG 1293


>ref|YP_001552317.1| replicase [Phlox virus B]
 gb|ABW05092.1| replicase [Phlox virus B]
          Length = 2051

 Score =  850 bits (2197), Expect = 0.0
 Identities = 425/627 (67%), Positives = 488/627 (77%), Gaps = 29/627 (4%)
 Frame = -1

Query: 1796 EQLLEGQSYKFNVQSHRFNNENFRGRLPCEITGKDGAEPYLEEHLLYTGCEELVQIMDEY 1617
            + +LEG  YK+ ++S RF N NF+GRLPCE  G        EEHLLY+G E L  I  E+
Sbjct: 1376 DSVLEGAEYKYVIKSRRFKNGNFQGRLPCEF-GTQMEGQATEEHLLYSGLEHLHVIPQEF 1434

Query: 1616 SKVFLVSSFEEKKI-----------------------------IXXXSAATSEKRWLTAL 1524
            SKVFLVSSFEEKKI                             I   SA TSEKRW+TAL
Sbjct: 1435 SKVFLVSSFEEKKIVEAHFPGSNPTVLTFGESTGLNFKYGTIIITNVSAHTSEKRWVTAL 1494

Query: 1523 SRFSENICFVNLLGTDWSGLFGLYKHRALGHFLSKRAQLKDLLDHLPGQPQFQNGFSTLI 1344
            SRFSENICFVNL+   WS L  +Y  R LG FL KRA+L DLL+HLPG   F + +   I
Sbjct: 1495 SRFSENICFVNLVNLSWSELARMYATRVLGRFLGKRAKLSDLLEHLPGVAVFTDSYDENI 1554

Query: 1343 GRDAGKREEKLIGDPWLKCMIDLGQTXXXXXXXXXXXXXXXEWFKTHLPQAELEGVRARW 1164
            G+D G REEK+ GDPWLK M+DL Q                EWFK HLPQAELE VRA+W
Sbjct: 1555 GKDEGVREEKVQGDPWLKGMVDLFQIEDVEEEEEQLEEMQTEWFKVHLPQAELESVRAKW 1614

Query: 1163 VHKIMLKEAREVRMGDIVSEQFTDDYPKELGINLTNAAERFETIYPRHRASDTVTFIMAV 984
            VHKI+ KE REVR+G +VSEQFTD++P+E G  LTNAAERFE IYPRH+A+DTVTF+MAV
Sbjct: 1615 VHKILAKEFREVRIGHLVSEQFTDEHPREQGKQLTNAAERFEAIYPRHKANDTVTFMMAV 1674

Query: 983  KKRLRFSRPAVERAKLQEAKLYGKFLLGEFLKKVPLKQAHNATMMERAKFDFEEKKTSKS 804
            KKRL+FSRPA E+AKL EA  YGKF+L EFLKK+P+ ++ +  MME++K +FEEKK SKS
Sbjct: 1675 KKRLKFSRPATEKAKLVEAMPYGKFMLKEFLKKIPMNKSRDTKMMEQSKLEFEEKKLSKS 1734

Query: 803  AAIIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAPYM 624
            AA IENH+GRSCRDWLID+GLIFSKSQLCTKFDNRFRVAKAAQSIVCFQH VLCRFAPYM
Sbjct: 1735 AATIENHSGRSCRDWLIDIGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHEVLCRFAPYM 1794

Query: 623  RYIEAKLHEALPSRFYIHSGKGLDELNEWVIKGKFEGVCTESDYEAFDASQDQYIVAFEL 444
            RYIE KLH+ALP  FYIHSGKGL+ELNEWV++G+F+GVCTESDYEAFDASQDQYI+AFE+
Sbjct: 1795 RYIEKKLHQALPGNFYIHSGKGLEELNEWVMRGRFDGVCTESDYEAFDASQDQYIMAFEI 1854

Query: 443  ALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNIK 264
             +++YLGLP DLI DY FIK HLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRY I+
Sbjct: 1855 EMIKYLGLPADLISDYEFIKTHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYEIR 1914

Query: 263  DSEHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCSDGIYKKPQ 84
             +E ICFAGDDMCAS+RL + + +EGFL+KLKLKAKVFFV  PTFCGWHL  DGIYKKPQ
Sbjct: 1915 GNEFICFAGDDMCASKRLPLSRAYEGFLSKLKLKAKVFFVKSPTFCGWHLSPDGIYKKPQ 1974

Query: 83   LVLERMCIAKEKNNLANCLDNYAIEVS 3
            LV+ERMCIAKEK NL +C+DNYAIE+S
Sbjct: 1975 LVMERMCIAKEKGNLIDCIDNYAIELS 2001



 Score =  103 bits (258), Expect = 6e-19
 Identities = 54/107 (50%), Positives = 67/107 (62%), Gaps = 9/107 (8%)
 Frame = -3

Query: 2097 FYVSPRKALAQEHESKCMSL--------GKASVGALGGATRKSGRKERQGVA-KHWKTLT 1945
            FYVSPR+ALA E   K  +         G +S    G +T      + + +  K+W   T
Sbjct: 1246 FYVSPRRALADEFRQKLENAVVRTKRKKGASSKNGAGASTGPDPNSQAERMKRKNWLVCT 1305

Query: 1944 FETFLKQVHMVKPGMALIIDEIQLYPPGYLDLVCLLLVEGVHIYIGG 1804
            FE  LK++H+VKPGMALI+DEIQLYPPGYLDL+C L  EGVHI IGG
Sbjct: 1306 FEIILKKIHLVKPGMALILDEIQLYPPGYLDLICALCAEGVHIVIGG 1352


>ref|YP_001165301.1| replicase [Phlox virus S]
 gb|ABP37862.1| replicase [Phlox virus S]
          Length = 1990

 Score =  843 bits (2179), Expect = 0.0
 Identities = 425/627 (67%), Positives = 485/627 (77%), Gaps = 29/627 (4%)
 Frame = -1

Query: 1796 EQLLEGQSYKFNVQSHRFNNENFRGRLPCEITGKDGAEPYLEEHLLYTGCEELVQIMDEY 1617
            ++LL   +YK+N+ S RF NENF  RL C    +   E    EHLLY+G  E+V I  E+
Sbjct: 1317 DRLLGKATYKYNMLSQRFKNENFLSRLHCRFIKEQMNEK--AEHLLYSGLNEMVMIDKEF 1374

Query: 1616 SKVFLVSSFEEKKI-----------------------------IXXXSAATSEKRWLTAL 1524
             + FLVSSF+EKKI                             I   S+ TSEKRW+TAL
Sbjct: 1375 QEAFLVSSFDEKKIVSAHFDIPEHRILTFGESTGLNFKMGTVIITNVSSLTSEKRWVTAL 1434

Query: 1523 SRFSENICFVNLLGTDWSGLFGLYKHRALGHFLSKRAQLKDLLDHLPGQPQFQNGFSTLI 1344
            SRFS NICFVNL G DW  L  +Y  R+L  FL   ++ +D+++ LPG+P F +G+S ++
Sbjct: 1435 SRFSNNICFVNLTGLDWQTLAKVYVGRSLSTFLCACSKPEDIVNLLPGKPIFMDGYSIVV 1494

Query: 1343 GRDAGKREEKLIGDPWLKCMIDLGQTXXXXXXXXXXXXXXXEWFKTHLPQAELEGVRARW 1164
            G+D G REEK+ GDPWLK MIDL Q                EWFKTHLP+ ELE VRA+W
Sbjct: 1495 GKDEGLREEKMQGDPWLKGMIDLFQIEDVEEVEEQFEELQEEWFKTHLPREELESVRAKW 1554

Query: 1163 VHKIMLKEAREVRMGDIVSEQFTDDYPKELGINLTNAAERFETIYPRHRASDTVTFIMAV 984
            VH I+ KE REVRMG  VSEQFTD+YP++LG NLTN AERFETIYPRHRA+DTVTF+MAV
Sbjct: 1555 VHNILAKEFREVRMGFNVSEQFTDEYPRDLGQNLTNQAERFETIYPRHRANDTVTFLMAV 1614

Query: 983  KKRLRFSRPAVERAKLQEAKLYGKFLLGEFLKKVPLKQAHNATMMERAKFDFEEKKTSKS 804
            KKRLRFS PA E+ KL +A +YGKF+L EFL K+PLK+ H+  MME+AK +FE+KKTSKS
Sbjct: 1615 KKRLRFSSPAKEKCKLLDASVYGKFMLDEFLSKIPLKKQHDRQMMEQAKKEFEDKKTSKS 1674

Query: 803  AAIIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAPYM 624
            AA IENH+GRSCRDWLID+GLIFSKSQLCTKFDNRFRVAKAAQSIVCFQH VLCRFAPYM
Sbjct: 1675 AATIENHSGRSCRDWLIDIGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHEVLCRFAPYM 1734

Query: 623  RYIEAKLHEALPSRFYIHSGKGLDELNEWVIKGKFEGVCTESDYEAFDASQDQYIVAFEL 444
            RYIE KLHE LP R+Y+HSGKGL+ELN WVIKG F GVCTESDYEAFDASQDQY+VAFE+
Sbjct: 1735 RYIEKKLHEVLPERYYVHSGKGLEELNSWVIKGGFGGVCTESDYEAFDASQDQYMVAFEV 1794

Query: 443  ALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNIK 264
            A+MEYLGLPRDLIEDY FIK HLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFL+Y IK
Sbjct: 1795 AVMEYLGLPRDLIEDYKFIKTHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLKYEIK 1854

Query: 263  DSEHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCSDGIYKKPQ 84
              E ICFAGDDMCASERL  K +H GFL+KLKLKAKVF V KPTFCGW+LC DGIYKKPQ
Sbjct: 1855 GHEFICFAGDDMCASERLATKHKHVGFLSKLKLKAKVFMVSKPTFCGWNLCPDGIYKKPQ 1914

Query: 83   LVLERMCIAKEKNNLANCLDNYAIEVS 3
            LV+ERMCIAKEK NLANC+DNYAIEVS
Sbjct: 1915 LVMERMCIAKEKANLANCIDNYAIEVS 1941



 Score = 94.7 bits (234), Expect = 4e-16
 Identities = 52/100 (52%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
 Frame = -3

Query: 2097 FYVSPRKALAQEHESKCMSLGKASVGALGGATRKSGR--KERQGVAKHWKTLTFETFLKQ 1924
            FY+SPR+ALA E + K M+             +K GR  K RQ   K+W   TFE FLK+
Sbjct: 1210 FYISPRRALADEFKGKVMA-------------KKVGRFDKLRQ---KNWSICTFEIFLKK 1253

Query: 1923 VHMVKPGMALIIDEIQLYPPGYLDLVCLLLVEGVHIYIGG 1804
             H+VKPGMA+I+DE+QLYPPGYLDLV LL  +GV+  +GG
Sbjct: 1254 RHLVKPGMAVILDELQLYPPGYLDLVMLLCPKGVYFIVGG 1293


>ref|YP_009288956.1| replicase [Ligustrum virus A]
 gb|AOO96599.1| replicase [Ligustrum virus A]
          Length = 1968

 Score =  830 bits (2145), Expect = 0.0
 Identities = 421/629 (66%), Positives = 482/629 (76%), Gaps = 28/629 (4%)
 Frame = -1

Query: 1805 AXXEQLLEGQSYKFNVQSHRFNNENFRGRLPCEITGKDGAEPYLEEHLLYTGCEELVQIM 1626
            A  ++LL G SY F +QS RF N NF  RLPC   G  G     EE+L+Y G + L +I 
Sbjct: 1288 ADFKRLLTGASYNFVIQSKRFINPNFIDRLPCSF-GNLGGTKDKEEYLMYDGVDGLAKIP 1346

Query: 1625 DEYSKVFLVSSFEEKKI----------------------------IXXXSAATSEKRWLT 1530
            +++ +  LVSSF+EKKI                            I   S+ TSE+RW+T
Sbjct: 1347 EQFLEAILVSSFDEKKIVYSYIGQDSNVMTFGESTGLTFDYGTVIISSVSSMTSEQRWVT 1406

Query: 1529 ALSRFSENICFVNLLGTDWSGLFGLYKHRALGHFLSKRAQLKDLLDHLPGQPQFQNGFST 1350
            ALSRF +NIC VNL    WS L   Y+ + L  FL+  A + DL   LPG+P+F + +  
Sbjct: 1407 ALSRFKKNICLVNLTNVLWSQLALDYRGKVLHKFLTGTASVTDLSAFLPGEPKFTHSYDL 1466

Query: 1349 LIGRDAGKREEKLIGDPWLKCMIDLGQTXXXXXXXXXXXXXXXEWFKTHLPQAELEGVRA 1170
             +G+D G +EEKL GDPWLK MI LGQ                +WFKTHLPQA+LEGVRA
Sbjct: 1467 NVGKDEGVKEEKLAGDPWLKGMIFLGQAEDCEEIQEIATEVKEQWFKTHLPQADLEGVRA 1526

Query: 1169 RWVHKIMLKEAREVRMGDIVSEQFTDDYPKELGINLTNAAERFETIYPRHRASDTVTFIM 990
             WVHKIM KE REVR+G +VS+QFTD++ K+LG  LTNAAERFETIYPRHRA+DTVTFIM
Sbjct: 1527 TWVHKIMAKEMREVRLGYLVSDQFTDEHSKQLGKQLTNAAERFETIYPRHRANDTVTFIM 1586

Query: 989  AVKKRLRFSRPAVERAKLQEAKLYGKFLLGEFLKKVPLKQAHNATMMERAKFDFEEKKTS 810
            AVKKRLRFS PA E  KL +AKLYGKFLL EFLKK+PLK+ H+  MM+ A+  FE+KKTS
Sbjct: 1587 AVKKRLRFSNPAKEMGKLGQAKLYGKFLLDEFLKKIPLKRQHDKVMMDAARQAFEDKKTS 1646

Query: 809  KSAAIIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAP 630
            KSAA IENH+ RSCRDWLID+GLIFSKSQLCTKFDNRFRVAKAAQSIVCFQH VLCRFAP
Sbjct: 1647 KSAATIENHSNRSCRDWLIDIGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHEVLCRFAP 1706

Query: 629  YMRYIEAKLHEALPSRFYIHSGKGLDELNEWVIKGKFEGVCTESDYEAFDASQDQYIVAF 450
            YMRYIE KLHE LPS +YIHSGKGL+ELN+WV++GKFEGVCTESDYEAFDASQDQYIVAF
Sbjct: 1707 YMRYIEMKLHEVLPSNYYIHSGKGLEELNDWVLRGKFEGVCTESDYEAFDASQDQYIVAF 1766

Query: 449  ELALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYN 270
            E+A+M+YLGLP+ LI DY FIK HLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRY 
Sbjct: 1767 EMAVMKYLGLPQSLINDYVFIKTHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYE 1826

Query: 269  IKDSEHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCSDGIYKK 90
            IK +E ICFAGDDMCAS RL IKKEH+GFL+KLKLKAKV F +KPTFCGW+L  DGIYKK
Sbjct: 1827 IKGNEFICFAGDDMCASRRLPIKKEHDGFLSKLKLKAKVAFTNKPTFCGWNLTPDGIYKK 1886

Query: 89   PQLVLERMCIAKEKNNLANCLDNYAIEVS 3
            PQLV+ERMCIAKE NNLANC+DNYAIEVS
Sbjct: 1887 PQLVMERMCIAKETNNLANCIDNYAIEVS 1915



 Score = 74.7 bits (182), Expect = 6e-10
 Identities = 43/97 (44%), Positives = 55/97 (56%)
 Frame = -3

Query: 2094 YVSPRKALAQEHESKCMSLGKASVGALGGATRKSGRKERQGVAKHWKTLTFETFLKQVHM 1915
            Y+SPRKALA+E + K +SL            R    +++ G  +HW   TFE FL+   +
Sbjct: 1183 YISPRKALAEEFK-KMLSLN----------VRNQQTRKKLG-QEHWTVSTFEKFLQNAEL 1230

Query: 1914 VKPGMALIIDEIQLYPPGYLDLVCLLLVEGVHIYIGG 1804
             K G  LI DEIQLYPPGYLDLV  L+   V I + G
Sbjct: 1231 TKSGCVLIFDEIQLYPPGYLDLVSYLVPADVRIVVAG 1267


>emb|CAJ41874.1| replicase, partial [Chrysanthemum virus B]
          Length = 489

 Score =  780 bits (2014), Expect = 0.0
 Identities = 392/465 (84%), Positives = 405/465 (87%), Gaps = 30/465 (6%)
 Frame = -1

Query: 1796 EQLLEGQSYKFNVQSHRFNNENFRGRLPCEITGKDGAEPYLEEHLLYTGCEELVQIMDEY 1617
            EQLLEGQSYKFNVQSHRFNNENFRGRLPCEITGK+ AE   EEHLLYTGCEELVQIMDEY
Sbjct: 25   EQLLEGQSYKFNVQSHRFNNENFRGRLPCEITGKEVAESLSEEHLLYTGCEELVQIMDEY 84

Query: 1616 SKVFLVSSFEEKKIIXXX------------------------------SAATSEKRWLTA 1527
            SK+FLVSSFEEKKII                                 SAATSEKRWLTA
Sbjct: 85   SKIFLVSSFEEKKIIETHFPISEQRKVYTFGESTGLNFKVGTIIITNVSAATSEKRWLTA 144

Query: 1526 LSRFSENICFVNLLGTDWSGLFGLYKHRALGHFLSKRAQLKDLLDHLPGQPQFQNGFSTL 1347
            LSRFSENICFVNLLGTDW+GLFGLYKHRALG FLSK+AQLKDLLDHLPGQPQFQNG STL
Sbjct: 145  LSRFSENICFVNLLGTDWNGLFGLYKHRALGRFLSKQAQLKDLLDHLPGQPQFQNGLSTL 204

Query: 1346 IGRDAGKREEKLIGDPWLKCMIDLGQTXXXXXXXXXXXXXXXEWFKTHLPQAELEGVRAR 1167
            IGRDAGKR+EKL+GDPWLKCMIDLGQ                EWFKTHLPQA+LEGVRAR
Sbjct: 205  IGRDAGKRKEKLLGDPWLKCMIDLGQAEDAEEVELLEEVMQEEWFKTHLPQADLEGVRAR 264

Query: 1166 WVHKIMLKEAREVRMGDIVSEQFTDDYPKELGINLTNAAERFETIYPRHRASDTVTFIMA 987
            WVHKIMLKEAREVRMG++VSEQFTDDYPKELG NLTNAAERFETIYPRHRASDTVTFIMA
Sbjct: 265  WVHKIMLKEAREVRMGNMVSEQFTDDYPKELGTNLTNAAERFETIYPRHRASDTVTFIMA 324

Query: 986  VKKRLRFSRPAVERAKLQEAKLYGKFLLGEFLKKVPLKQAHNATMMERAKFDFEEKKTSK 807
            VKKRLRFSRPAVE+AKLQEAKLYGKFLL EFLKKV LKQAHN TMMERAKFDFEEKKTSK
Sbjct: 325  VKKRLRFSRPAVEKAKLQEAKLYGKFLLNEFLKKVSLKQAHNTTMMERAKFDFEEKKTSK 384

Query: 806  SAAIIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAPY 627
            SAAIIENHAGRSCRDWLID+GLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAPY
Sbjct: 385  SAAIIENHAGRSCRDWLIDIGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAPY 444

Query: 626  MRYIEAKLHEALPSRFYIHSGKGLDELNEWVIKGKFEGVCTESDY 492
            MRYIEAKLHEALPSRFYIHSGKGLDELNEWVI+ KFEG+CTESDY
Sbjct: 445  MRYIEAKLHEALPSRFYIHSGKGLDELNEWVIQSKFEGICTESDY 489


>ref|YP_004035878.1| RNA-dependent RNA polymerase [Cowpea mild mottle virus]
 gb|ADQ54107.1| RNA-dependent RNA polymerase [Cowpea mild mottle virus]
          Length = 1836

 Score =  801 bits (2068), Expect = 0.0
 Identities = 408/630 (64%), Positives = 475/630 (75%), Gaps = 32/630 (5%)
 Frame = -1

Query: 1796 EQLLEGQSYKFNVQSHRFNNENFRGRLPCEITGK---DGAEPYLEEHLLYTGCEELVQIM 1626
            + LL+G+ YK+NV+S+RF N NF GRLPCE   +     + PYL    +Y   E+L  + 
Sbjct: 1164 DALLKGRVYKYNVKSYRFLNPNFIGRLPCEFAPELMHKESSPYL----IYNDLEQLSFLP 1219

Query: 1625 DEYSKVFLVSSFEEKKI----------------------------IXXXSAATSEKRWLT 1530
             EY +V LVSSFEEKKI                            I   S    E+RWLT
Sbjct: 1220 FEYGQVILVSSFEEKKIVSSYYPECKNVLTFGESTGLNFHYGTILITMISERAGERRWLT 1279

Query: 1529 ALSRFSENICFVNLLGTDWSGLFGLYKHRALGHFLSKRAQLKDLLDHLPGQPQFQNGFST 1350
            ALSRF  N+  VN  G     L  +Y+ + LG FL+ RA++ DL  +LPG+P+F+ GF +
Sbjct: 1280 ALSRFKNNVALVNATGYSIESLNMMYREKYLGRFLTGRAKVSDLEKYLPGKPEFKEGFDS 1339

Query: 1349 LIGRDAGKREEKLIGDPWLKCMIDLGQTXXXXXXXXXXXXXXXEWFKTHLPQAELEGVRA 1170
             +G+D G REEKL+GDPWLK MIDL Q                E FK HLP+ ELEGVR 
Sbjct: 1340 SVGKDEGIREEKLVGDPWLKSMIDLFQIEDVNVEELQEVVSQVEEFKIHLPRDELEGVRT 1399

Query: 1169 RWVHKIMLKEAREVRMGDIVSEQFTDDYPKELG-INLTNAAERFETIYPRHRASDTVTFI 993
            RWVHKI+ KE REVRMG IVS+QFTDD+ K+ G  +LTNAAERFETIYPRHRA+DTVTFI
Sbjct: 1400 RWVHKILNKEFREVRMGTIVSDQFTDDHSKQRGGTHLTNAAERFETIYPRHRANDTVTFI 1459

Query: 992  MAVKKRLRFSRPAVERAKLQEAKLYGKFLLGEFLKKVPLKQAHNATMMERAKFDFEEKKT 813
            MAVKKRLRFS+P VE AKL +AKL+G++LL EFLKK+PLK+ HN  MME+A+ DF +KKT
Sbjct: 1460 MAVKKRLRFSKPHVEAAKLNQAKLFGRYLLQEFLKKIPLKRTHNTQMMEQARQDFFDKKT 1519

Query: 812  SKSAAIIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFA 633
            SKSAA IENH  RSCRDWL D+  +FSKSQ+CTKFDNRFR AKAAQSI CFQH+VLCRFA
Sbjct: 1520 SKSAATIENHNIRSCRDWLADIVQVFSKSQICTKFDNRFRSAKAAQSIACFQHSVLCRFA 1579

Query: 632  PYMRYIEAKLHEALPSRFYIHSGKGLDELNEWVIKGKFEGVCTESDYEAFDASQDQYIVA 453
            PYMRYIE KLHE LP+R+YIHSGK L++LNEWV+KG+F GVCTESDYEAFDASQDQYIVA
Sbjct: 1580 PYMRYIEKKLHEVLPARYYIHSGKSLEQLNEWVLKGQFNGVCTESDYEAFDASQDQYIVA 1639

Query: 452  FELALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRY 273
            FEL LM+YLGLP DLI+DY +IK HLGSKLG FAIMRF+GEASTFLFNT+ANMLFTFLRY
Sbjct: 1640 FELELMKYLGLPNDLIQDYTYIKTHLGSKLGGFAIMRFTGEASTFLFNTLANMLFTFLRY 1699

Query: 272  NIKDSEHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCSDGIYK 93
             IK +E+ICFAGDDMC+S+RL IKKEHEGFL K+KLKAKV    KPTFCGWHL  DGIYK
Sbjct: 1700 EIKGNEYICFAGDDMCSSKRLVIKKEHEGFLKKIKLKAKVQHTSKPTFCGWHLSPDGIYK 1759

Query: 92   KPQLVLERMCIAKEKNNLANCLDNYAIEVS 3
            KPQLV ERMCIAKE NNL NC+D+YAIEVS
Sbjct: 1760 KPQLVFERMCIAKETNNLHNCIDSYAIEVS 1789


>ref|YP_006297586.1| unnamed protein product [American hop latent virus]
 gb|AFI61519.1| putative viral replicase [American hop latent virus]
          Length = 1977

 Score =  795 bits (2054), Expect = 0.0
 Identities = 404/627 (64%), Positives = 465/627 (74%), Gaps = 29/627 (4%)
 Frame = -1

Query: 1796 EQLLEGQSYKFNVQSHRFNNENFRGRLPCEITGKDGAEPYLEE-HLLYTGCEELVQIMDE 1620
            E +L+ + Y++N+ S RF N N  GRLPC I   D     ++E +L+Y   E+L  + DE
Sbjct: 1307 EMVLKEREYRYNIMSRRFQNANLVGRLPCYI---DQERIKIDESYLIYDRVEDLADLPDE 1363

Query: 1619 YSKVFLVSSFEEKKIIXXX----------------------------SAATSEKRWLTAL 1524
            Y  V LVSSF+EKKI+                               S  TSEKRW+TAL
Sbjct: 1364 YRDVILVSSFDEKKIVESYTPDAKQILTFGESTGRNFRCGCILVTEASKYTSEKRWITAL 1423

Query: 1523 SRFSENICFVNLLGTDWSGLFGLYKHRALGHFLSKRAQLKDLLDHLPGQPQFQNGFSTLI 1344
            SRFS N+ FVN   T +  L  +YK + L  FL KR+  +     LPG+P F+ GFS  +
Sbjct: 1424 SRFSRNVAFVNATSTSFEQLLLVYKGKVLADFLCKRSTEEFFTQILPGKPVFRKGFSNAV 1483

Query: 1343 GRDAGKREEKLIGDPWLKCMIDLGQTXXXXXXXXXXXXXXXEWFKTHLPQAELEGVRARW 1164
            G+D G  EEKL GDPWLK MIDL Q                EWFKTHLPQ ELE VRARW
Sbjct: 1484 GKDEGIMEEKLQGDPWLKTMIDLLQIEDIEETLIDQEEMQKEWFKTHLPQCELESVRARW 1543

Query: 1163 VHKIMLKEAREVRMGDIVSEQFTDDYPKELGINLTNAAERFETIYPRHRASDTVTFIMAV 984
            VHKI+ KE RE R+G ++SEQFT+++ KE G+ LTNA ERFETIYPRHRA+DTVTF+MAV
Sbjct: 1544 VHKILAKEHREKRIGCMISEQFTEEHSKEQGVRLTNACERFETIYPRHRANDTVTFLMAV 1603

Query: 983  KKRLRFSRPAVERAKLQEAKLYGKFLLGEFLKKVPLKQAHNATMMERAKFDFEEKKTSKS 804
            KKRLRFS P  ERAK+ EA  YG+FLL EFLKKVPL+Q HN  +M +AK DFE KKT+KS
Sbjct: 1604 KKRLRFSDPNKERAKMHEAGNYGRFLLKEFLKKVPLRQKHNKELMAQAKADFEAKKTAKS 1663

Query: 803  AAIIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAPYM 624
            AA IENHAGRSCRDWL D+GL+FSKSQ+CTK+DNRFR AKAAQ+IVCF HAVLCRFAPYM
Sbjct: 1664 AATIENHAGRSCRDWLADIGLVFSKSQICTKYDNRFRSAKAAQTIVCFSHAVLCRFAPYM 1723

Query: 623  RYIEAKLHEALPSRFYIHSGKGLDELNEWVIKGKFEGVCTESDYEAFDASQDQYIVAFEL 444
            RYIE KL E LP ++YIHSGKGL+ELN+WVIKG+F+ VCTESDYEAFDASQDQYIVAFE+
Sbjct: 1724 RYIEYKLKEVLPEKYYIHSGKGLEELNDWVIKGRFDDVCTESDYEAFDASQDQYIVAFEI 1783

Query: 443  ALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNIK 264
             +M YLGLP DLI DY +IK HLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRY IK
Sbjct: 1784 EVMRYLGLPADLIADYLYIKTHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYEIK 1843

Query: 263  DSEHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCSDGIYKKPQ 84
              E ICFAGDDMCA+ +L I +EHE FL KLKLKAKV    +PTFCGW+LCSDGIYKKPQ
Sbjct: 1844 GRERICFAGDDMCANTKLVISREHEWFLGKLKLKAKVENTKRPTFCGWNLCSDGIYKKPQ 1903

Query: 83   LVLERMCIAKEKNNLANCLDNYAIEVS 3
            LVLERMCIAKE NNL NC+DNYAIEVS
Sbjct: 1904 LVLERMCIAKETNNLHNCIDNYAIEVS 1930



 Score = 70.5 bits (171), Expect = 1e-08
 Identities = 39/97 (40%), Positives = 55/97 (56%)
 Frame = -3

Query: 2094 YVSPRKALAQEHESKCMSLGKASVGALGGATRKSGRKERQGVAKHWKTLTFETFLKQVHM 1915
            YVSPR+ LA +  S           A+G    +  RK+    +++W+  TFE F+  +  
Sbjct: 1200 YVSPRRGLADDFAS-----------AMG--IERGPRKKLNVASQNWRVNTFEKFIAVIKS 1246

Query: 1914 VKPGMALIIDEIQLYPPGYLDLVCLLLVEGVHIYIGG 1804
            +  G A+IIDEIQLYPPGYLD+   LL   VHI++ G
Sbjct: 1247 IGSGAAVIIDEIQLYPPGYLDICLALLERDVHIFLVG 1283


>gb|ALJ56053.1| putative viral replicase [American hop latent virus]
          Length = 1977

 Score =  795 bits (2054), Expect = 0.0
 Identities = 404/627 (64%), Positives = 466/627 (74%), Gaps = 29/627 (4%)
 Frame = -1

Query: 1796 EQLLEGQSYKFNVQSHRFNNENFRGRLPCEITGKDGAEPYLEE-HLLYTGCEELVQIMDE 1620
            E +L+ + Y++N+ S RF N N  GRLPC I   D  +  ++E +L+Y   E+L  + DE
Sbjct: 1307 EMVLKEREYRYNIMSRRFQNANLVGRLPCYI---DQEQIKIDENYLIYDRVEDLADLPDE 1363

Query: 1619 YSKVFLVSSFEEKKIIXXX----------------------------SAATSEKRWLTAL 1524
            Y  V LVSSF+EKKI+                               S  TSEKRW+TAL
Sbjct: 1364 YRDVILVSSFDEKKIVESYTPDAKQILTFGESTGRNFRCGCILVTEASKYTSEKRWITAL 1423

Query: 1523 SRFSENICFVNLLGTDWSGLFGLYKHRALGHFLSKRAQLKDLLDHLPGQPQFQNGFSTLI 1344
            SRFS N+ FVN   T +  L  +YK + L  FL KR+  +     LPG+P F+ GFS  +
Sbjct: 1424 SRFSRNVVFVNATSTSFEQLLLVYKGKVLADFLCKRSTEEFFTKILPGKPVFRKGFSNAV 1483

Query: 1343 GRDAGKREEKLIGDPWLKCMIDLGQTXXXXXXXXXXXXXXXEWFKTHLPQAELEGVRARW 1164
            G+D G  EEKL GDPWLK MIDL Q                EWFKTHLPQ ELE VRARW
Sbjct: 1484 GKDEGIMEEKLQGDPWLKTMIDLLQIEDIEETLIDQEEMQKEWFKTHLPQCELESVRARW 1543

Query: 1163 VHKIMLKEAREVRMGDIVSEQFTDDYPKELGINLTNAAERFETIYPRHRASDTVTFIMAV 984
            VHKI+ KE RE R+G ++SEQFT+++ KE G+ LTNA ERFETIYPRHRA+DTVTF+MAV
Sbjct: 1544 VHKILAKEHREKRIGCMISEQFTEEHSKEQGVQLTNACERFETIYPRHRANDTVTFLMAV 1603

Query: 983  KKRLRFSRPAVERAKLQEAKLYGKFLLGEFLKKVPLKQAHNATMMERAKFDFEEKKTSKS 804
            KKRLRFS P  ERAK+ EA  YG+FLL EFLKKVPL+Q HN  +M +AK DFE KKT+KS
Sbjct: 1604 KKRLRFSDPNKERAKMHEAGNYGRFLLKEFLKKVPLRQKHNKELMAQAKADFEAKKTAKS 1663

Query: 803  AAIIENHAGRSCRDWLIDVGLIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAPYM 624
            AA IENHAGRSCRDWL D+GL+FSKSQ+CTK+DNRFR AKAAQ+IVCF HAVLCRFAPYM
Sbjct: 1664 AATIENHAGRSCRDWLADIGLVFSKSQICTKYDNRFRSAKAAQTIVCFSHAVLCRFAPYM 1723

Query: 623  RYIEAKLHEALPSRFYIHSGKGLDELNEWVIKGKFEGVCTESDYEAFDASQDQYIVAFEL 444
            RYIE KL E LP ++YIHSGKGL+ELN+WVIKG+F+ VCTESDYEAFDASQDQYIVAFE+
Sbjct: 1724 RYIEYKLKEVLPEKYYIHSGKGLEELNDWVIKGRFDDVCTESDYEAFDASQDQYIVAFEI 1783

Query: 443  ALMEYLGLPRDLIEDYAFIKCHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYNIK 264
             +M YLGLP DLI DY +IK HLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRY IK
Sbjct: 1784 EVMRYLGLPADLIADYLYIKTHLGSKLGNFAIMRFSGEASTFLFNTMANMLFTFLRYEIK 1843

Query: 263  DSEHICFAGDDMCASERLCIKKEHEGFLNKLKLKAKVFFVDKPTFCGWHLCSDGIYKKPQ 84
              E ICFAGDDMCA+ +L I +EHE FL KLKLKAKV    +PTFCGW+LCSDGIYKKPQ
Sbjct: 1844 GRERICFAGDDMCANTKLVISREHEWFLGKLKLKAKVENTKRPTFCGWNLCSDGIYKKPQ 1903

Query: 83   LVLERMCIAKEKNNLANCLDNYAIEVS 3
            LVLERMCIAKE NNL NC+DNYAIEVS
Sbjct: 1904 LVLERMCIAKETNNLHNCIDNYAIEVS 1930



 Score = 70.5 bits (171), Expect = 1e-08
 Identities = 39/97 (40%), Positives = 55/97 (56%)
 Frame = -3

Query: 2094 YVSPRKALAQEHESKCMSLGKASVGALGGATRKSGRKERQGVAKHWKTLTFETFLKQVHM 1915
            YVSPR+ LA +  S           A+G    +  RK+    +++W+  TFE F+  +  
Sbjct: 1200 YVSPRRGLADDFAS-----------AMG--IERGPRKKLNVASQNWRVNTFEKFIAVIKS 1246

Query: 1914 VKPGMALIIDEIQLYPPGYLDLVCLLLVEGVHIYIGG 1804
            +  G A+IIDEIQLYPPGYLD+   LL   VHI++ G
Sbjct: 1247 IGSGAAVIIDEIQLYPPGYLDICLALLERDVHIFLVG 1283