BLASTX nr result

ID: Chrysanthemum21_contig00000398 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00000398
         (350 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022026733.1| GATA transcription factor 1-like [Helianthus...    60   2e-08
ref|XP_023732227.1| GATA transcription factor 1-like [Lactuca sa...    56   7e-07

>ref|XP_022026733.1| GATA transcription factor 1-like [Helianthus annuus]
 gb|OTG35695.1| putative GATA transcription factor 1 [Helianthus annuus]
          Length = 225

 Score = 60.1 bits (144), Expect = 2e-08
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = +1

Query: 247 SSHPSFPEFAEEELEWLSNKDAFPALDDILSTPN 348
           S   SFPEF EEELEWLSNKDAFPALDDI + PN
Sbjct: 40  SDDSSFPEFVEEELEWLSNKDAFPALDDIFTDPN 73


>ref|XP_023732227.1| GATA transcription factor 1-like [Lactuca sativa]
 gb|PLY75090.1| hypothetical protein LSAT_2X42120 [Lactuca sativa]
          Length = 271

 Score = 56.2 bits (134), Expect = 7e-07
 Identities = 30/45 (66%), Positives = 33/45 (73%), Gaps = 8/45 (17%)
 Frame = +1

Query: 238 KTPSSHP-----SFPEFAEEELEWLSNKDAFPALD---DILSTPN 348
           KT S  P     SFPEFAEEELEWLSNKDAFPAL+   DI++ PN
Sbjct: 45  KTNSQEPDDCCGSFPEFAEEELEWLSNKDAFPALETCFDIITNPN 89


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