BLASTX nr result

ID: Cheilocostus21_contig00066534 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00066534
         (487 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ93789.1| predicted protein [Hordeum vulgare subsp. vulgare]    160   1e-46

>dbj|BAJ93789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 226

 Score =  160 bits (405), Expect = 1e-46
 Identities = 87/160 (54%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
 Frame = +3

Query: 6   MKAALALIFFACVAGSMASDARGDFLNQLAQQGSVVAQGVLNHLQGQILGLVQQAIGQLS 185
           MKAALA+IFFACVAGSMA+DAR +  +QL  QG  +AQ + + LQ  +L  +Q A+GQLS
Sbjct: 1   MKAALAIIFFACVAGSMAADARLEIFDQLLAQGQGIAQTIFSQLQATVLATIQTALGQLS 60

Query: 186 SIVGSFGGRFD-FNVILDQFKPLVSGAINQLLVQVLGSISGLIGGRAGLDIAAIFSGFLQ 362
           + +   GGRFD FN +++QFKP++     Q L  VLGS+SG++GG A +D+A IF GF  
Sbjct: 61  AAI---GGRFDLFNDLINQFKPILEQLAGQALSSVLGSLSGILGG-ARIDLAEIFGGFWN 116

Query: 363 QITTPLTQIGQHLLNQGLSAVLGGIG--GSRIFGDILASL 476
            I+T +T++GQH LNQGL+AVLGG+G  GSR   DI AS+
Sbjct: 117 SISTQVTELGQHFLNQGLAAVLGGLGNLGSRGISDIFASI 156


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