BLASTX nr result

ID: Cheilocostus21_contig00066130 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00066130
         (597 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9LEN0.1|ACET6_CERPU RecName: Full=Bifunctional delta 6-fatty...   172   9e-48
sp|Q9LEM9.1|DES6_CERPU RecName: Full=Acyl-lipid (9-3)-desaturase...    88   8e-17
gb|ABT18092.1| delta-6 fatty acid desaturase, partial [Ceratodon...    69   4e-11
gb|ABT18093.1| delta-6 fatty acid desaturase, partial [Ceratodon...    67   4e-10
ref|XP_001768507.1| predicted protein [Physcomitrella patens] >g...    56   8e-06

>sp|Q9LEN0.1|ACET6_CERPU RecName: Full=Bifunctional delta 6-fatty acyl
           acetylenase/desaturase; Short=CpAcet6
 emb|CAB94992.1| delta 6-fatty acetylenase [Ceratodon purpureus]
          Length = 483

 Score =  172 bits (435), Expect = 9e-48
 Identities = 80/89 (89%), Positives = 84/89 (94%)
 Frame = -2

Query: 269 MALVTDFINFLGTTWSKYSVYTQSYAGNYGPTLKHAKKVPVQGKTASQTLRQRSVQDKTP 90
           MALVTDF+NFLGTTWSKYSVYT SYAGNYGPTLKHAKKV  QGKTA QTLRQRSVQDK P
Sbjct: 1   MALVTDFLNFLGTTWSKYSVYTHSYAGNYGPTLKHAKKVSAQGKTAGQTLRQRSVQDKKP 60

Query: 89  GSYSLADVASHDRPGDCWIIVKEKVYDVS 3
           G+YSLADVASHDRPGDCW+IVKEKVYD+S
Sbjct: 61  GTYSLADVASHDRPGDCWMIVKEKVYDIS 89


>sp|Q9LEM9.1|DES6_CERPU RecName: Full=Acyl-lipid (9-3)-desaturase; AltName: Full=Delta
           6-fatty acid desaturase; Short=CpDES6
 emb|CAB94993.1| delta 6-fatty acid desaturase [Ceratodon purpureus]
          Length = 520

 Score = 88.2 bits (217), Expect = 8e-17
 Identities = 50/105 (47%), Positives = 65/105 (61%), Gaps = 14/105 (13%)
 Frame = -2

Query: 275 AKMALVTDFINFLGTTWSKYSVYTQSYAGNYGPTLKHAKKVPVQGKTAS----------- 129
           A M LV+DF+N LGTT  ++S+ T ++A     T KH+  + V+ +  S           
Sbjct: 23  ATMPLVSDFLNVLGTTLGQWSLST-TFAFKRLTTKKHSSDISVEAQKESVARGPVENISQ 81

Query: 128 ---QTLRQRSVQDKTPGSYSLADVASHDRPGDCWIIVKEKVYDVS 3
              Q +R+R VQDK P +YSL DVASHD P DCWII+KEKVYDVS
Sbjct: 82  SVAQPIRRRWVQDKKPVTYSLKDVASHDMPQDCWIIIKEKVYDVS 126


>gb|ABT18092.1| delta-6 fatty acid desaturase, partial [Ceratodon purpureus]
          Length = 197

 Score = 69.3 bits (168), Expect = 4e-11
 Identities = 31/46 (67%), Positives = 38/46 (82%)
 Frame = -2

Query: 140 KTASQTLRQRSVQDKTPGSYSLADVASHDRPGDCWIIVKEKVYDVS 3
           ++ +Q +R+R VQDK P +YSL DVASHD P DCWII+KEKVYDVS
Sbjct: 44  QSVAQPIRRRWVQDKKPVTYSLKDVASHDMPQDCWIIIKEKVYDVS 89


>gb|ABT18093.1| delta-6 fatty acid desaturase, partial [Ceratodon purpureus]
          Length = 197

 Score = 66.6 bits (161), Expect = 4e-10
 Identities = 32/54 (59%), Positives = 41/54 (75%), Gaps = 2/54 (3%)
 Frame = -2

Query: 158 KVPVQ--GKTASQTLRQRSVQDKTPGSYSLADVASHDRPGDCWIIVKEKVYDVS 3
           + PV+   ++ +Q +R+RSVQDK   +YSL DVASHD   DCWII+KEKVYDVS
Sbjct: 36  RAPVEDLSQSVTQPIRRRSVQDKNLVTYSLKDVASHDESQDCWIIIKEKVYDVS 89


>ref|XP_001768507.1| predicted protein [Physcomitrella patens]
 gb|PNR52973.1| hypothetical protein PHYPA_009348 [Physcomitrella patens]
          Length = 529

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 23/49 (46%), Positives = 36/49 (73%)
 Frame = -2

Query: 149 VQGKTASQTLRQRSVQDKTPGSYSLADVASHDRPGDCWIIVKEKVYDVS 3
           V  ++  + +R+RSV+++   SY L +V++H RP DCWI++K KVYDVS
Sbjct: 84  VLAESVVKPVRRRSVKERKSKSYLLTEVSAHTRPNDCWIVIKNKVYDVS 132


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