BLASTX nr result

ID: Cheilocostus21_contig00065915 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00065915
         (606 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_019178412.1| PREDICTED: uncharacterized protein LOC109173...    30   8e-06

>ref|XP_019178412.1| PREDICTED: uncharacterized protein LOC109173591 [Ipomoea nil]
          Length = 273

 Score = 30.0 bits (66), Expect(4) = 8e-06
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -2

Query: 86  KVVLRILEYLNGAPWKAILYKMNGH 12
           + V +IL YL GAP + I+Y+ +GH
Sbjct: 156 RAVEQILNYLKGAPGRGIVYQNHGH 180



 Score = 29.6 bits (65), Expect(4) = 8e-06
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -3

Query: 172 NYLIITKPYIFYGVIVISQLCRIP 101
           NYLI+T+P I Y V V+SQ    P
Sbjct: 127 NYLIVTRPDITYSVSVVSQFMASP 150



 Score = 28.1 bits (61), Expect(4) = 8e-06
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = -1

Query: 345 LFLSQRKYIIDFL*ENGIL 289
           +FLSQRKY++D L E G L
Sbjct: 73  IFLSQRKYVLDLLTETGKL 91



 Score = 27.7 bits (60), Expect(4) = 8e-06
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -3

Query: 541 HSTFIQCTSSSTFILAIYVAEILLIGSNKQHIFYVK 434
           HS F + + +   +L +YV +I++IGS+   I  +K
Sbjct: 8   HSAFYKHSKTGIILLVVYVDDIVIIGSDTAGIASLK 43


Top