BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00065891
         (999 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP66486.1| Retrovirus-related Pol polyprotein from transposo...    93   2e-36
gb|AAK29467.1| polyprotein-like [Solanum chilense]                     92   1e-34
gb|OMO51796.1| Reverse transcriptase, RNA-dependent DNA polymera...    97   1e-33
gb|PRQ29843.1| putative RNA-directed DNA polymerase [Rosa chinen...    92   2e-33
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]             86   3e-33
gb|PRQ60431.1| putative RNA-directed DNA polymerase [Rosa chinen...    92   4e-33
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    86   4e-33
gb|PKI75267.1| hypothetical protein CRG98_004307 [Punica granatum]     80   9e-29
gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposo...    80   1e-28
gb|KYP60296.1| Retrovirus-related Pol polyprotein from transposo...    79   3e-28
gb|KYP41607.1| Retrovirus-related Pol polyprotein from transposo...    78   2e-27
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]       77   6e-27
gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposo...    75   6e-27
gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposo...    75   6e-27
gb|KYP77046.1| Retrovirus-related Pol polyprotein from transposo...    77   1e-26
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]            77   1e-26
gb|KYP42630.1| Retrovirus-related Pol polyprotein from transposo...    75   2e-26
gb|KYP50580.1| Retrovirus-related Pol polyprotein from transposo...    76   2e-26
gb|KYP42640.1| Retrovirus-related Pol polyprotein from transposo...    75   2e-26
gb|KYP65438.1| Retrovirus-related Pol polyprotein from transposo...    77   2e-26

>gb|KYP66486.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1321

 Score = 93.2 bits (230), Expect(2) = 2e-36
 Identities = 45/68 (66%), Positives = 53/68 (77%)
 Frame = +3

Query: 243  GFELEENKYLVCKLKKSLYNLKQASRQWYKKFDSFIGSQFLKRTLAYPYIYLKSFDNGVF 422
            GFE++  + +VCKLKKSLY LKQA RQWYKKFDSFI SQ  KRT A P +Y+  + NG F
Sbjct: 940  GFEVKGKEDMVCKLKKSLYGLKQAPRQWYKKFDSFIKSQGFKRTDADPCVYINRYPNGKF 999

Query: 423  IILLLYVD 446
            +ILLLYVD
Sbjct: 1000 LILLLYVD 1007



 Score = 89.4 bits (220), Expect(2) = 2e-36
 Identities = 41/68 (60%), Positives = 53/68 (77%)
 Frame = +2

Query: 2    FKLKKDNDKMVKYKARLVVKKIYLEKSVDFNEIFSPFIKMCSIRVVLRLATNLNFEIEQF 181
            FKLKKD DK+V++KARLVVK    ++ +DF EIFSP +KMCSIRV+L L  +++ E+EQ 
Sbjct: 859  FKLKKDGDKLVRHKARLVVKGFSQKQGIDFEEIFSPVVKMCSIRVILGLVASMDLELEQL 918

Query: 182  DVNTIFLH 205
            DV T FLH
Sbjct: 919  DVKTAFLH 926



 Score = 70.5 bits (171), Expect(2) = 9e-12
 Identities = 39/101 (38%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
 Frame = +1

Query: 613 SDDMGRRLDRKALNITKKWVDISVVHQVEHKRQT-LLGKKLVDQYERKTAMNKTIAIRKV 789
           SD   ++L +K L+  ++WVDI++ +QV  +    +L KKL   YE K A +K   +RK+
Sbjct: 47  SDGDWKKLKKKTLSTIRQWVDITLYNQVSKETDPQVLWKKLESMYETKNAQSKIFMMRKL 106

Query: 790 SNLKDKDGQSIAEHLSD**DLLNQLTTIKVNLGDKVTALFL 912
            NLK ++G+++AEHL+D   L+ QL +  + L D++ AL L
Sbjct: 107 MNLKLQEGRAVAEHLNDFEGLVMQLISAGLTLEDEMQALLL 147



 Score = 28.9 bits (63), Expect(2) = 9e-12
 Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +3

Query: 501 ERRYSYMIKLTAYNYSIW-LMMKDHLIL 581
           E     M+KLTA NYS+W  MM+D L L
Sbjct: 2   ESNIGTMVKLTATNYSLWKSMMEDRLNL 29


>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score = 91.7 bits (226), Expect(2) = 1e-34
 Identities = 44/82 (53%), Positives = 58/82 (70%), Gaps = 4/82 (4%)
 Frame = +3

Query: 243  GFELEENKYLVCKLKKSLYNLKQASRQWYKKFDSFIGSQFLKRTLAYPYIYLKSFDNGVF 422
            GFE+   K++VCKL KSLY LKQA RQWYKKFDSF+ SQ  + T ++P +Y K F +  F
Sbjct: 944  GFEVSGKKHMVCKLNKSLYGLKQAPRQWYKKFDSFMKSQTYRNTYSHPCVYFKRFSDKNF 1003

Query: 423  IILLLYVDY----GTREQVVSK 476
            IILLLY DY    G  +++++K
Sbjct: 1004 IILLLYTDYMLIVGKDKELIAK 1025



 Score = 85.1 bits (209), Expect(2) = 1e-34
 Identities = 42/69 (60%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
 Frame = +2

Query: 2    FKLKKD-NDKMVKYKARLVVKKIYLEKSVDFNEIFSPFIKMCSIRVVLRLATNLNFEIEQ 178
            FKLKKD N K+V+YKARLVVK    +K +DF+EIFSP +KM SIR +L +A +L+ E+EQ
Sbjct: 862  FKLKKDGNGKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSIAASLDLEVEQ 921

Query: 179  FDVNTIFLH 205
             DV T FLH
Sbjct: 922  LDVKTAFLH 930


>gb|OMO51796.1| Reverse transcriptase, RNA-dependent DNA polymerase [Corchorus
            capsularis]
          Length = 1500

 Score = 87.0 bits (214), Expect(3) = 1e-33
 Identities = 42/68 (61%), Positives = 52/68 (76%)
 Frame = +3

Query: 243  GFELEENKYLVCKLKKSLYNLKQASRQWYKKFDSFIGSQFLKRTLAYPYIYLKSFDNGVF 422
            GF+++  +++VC+LKKSLY LKQA RQWYKKFDSF+ S   KRT   P +Y +SF N  F
Sbjct: 1037 GFKVKGKEHMVCRLKKSLYGLKQALRQWYKKFDSFMVSHLFKRTATDPCVYFRSFGNN-F 1095

Query: 423  IILLLYVD 446
            IILLLYVD
Sbjct: 1096 IILLLYVD 1103



 Score = 85.5 bits (210), Expect(3) = 1e-33
 Identities = 43/68 (63%), Positives = 51/68 (75%)
 Frame = +2

Query: 2    FKLKKDNDKMVKYKARLVVKKIYLEKSVDFNEIFSPFIKMCSIRVVLRLATNLNFEIEQF 181
            FKLKKD +K+V+YK  LVVK    +  +DF+EIFSP +KM SIRVVL LA +LN EIEQ 
Sbjct: 956  FKLKKDGNKLVRYKTCLVVKGFAQKACIDFDEIFSPVVKMSSIRVVLGLAASLNLEIEQL 1015

Query: 182  DVNTIFLH 205
            DV T FLH
Sbjct: 1016 DVKTAFLH 1023



 Score = 20.8 bits (42), Expect(3) = 1e-33
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = +1

Query: 211  IKEKIYIN*PEGLSLK 258
            ++E+IY++ PEG  +K
Sbjct: 1026 LQEEIYMDQPEGFKVK 1041



 Score = 97.4 bits (241), Expect(3) = 8e-21
 Identities = 51/101 (50%), Positives = 71/101 (70%), Gaps = 1/101 (0%)
 Frame = +1

Query: 613 SDDMGRRLDRKALNITKKWVDISVVHQV-EHKRQTLLGKKLVDQYERKTAMNKTIAIRKV 789
           SDD  ++LDRK+L   +KWVDI+V H V + K      +KL   YERK+ MNK    RK+
Sbjct: 328 SDDDWKKLDRKSLGTIRKWVDITVFHYVAQEKSAHAAWEKLAALYERKSPMNKAFGARKL 387

Query: 790 SNLKDKDGQSIAEHLSD**DLLNQLTTIKVNLGDKVTALFL 912
           SN+K K+GQS+AE+LSD  ++LN L T+K++LG++V  LFL
Sbjct: 388 SNMKYKEGQSMAEYLSDYQEMLNLLLTMKIDLGEEVNVLFL 428



 Score = 28.5 bits (62), Expect(3) = 8e-21
 Identities = 13/20 (65%), Positives = 16/20 (80%), Gaps = 1/20 (5%)
 Frame = +3

Query: 519 MIKLTAYNYSIWL-MMKDHL 575
           M+KLT  NY+IW  MM+DHL
Sbjct: 289 MMKLTTTNYNIWKPMMEDHL 308



 Score = 23.9 bits (50), Expect(3) = 8e-21
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 572 FNPVLDDSAKPKD 610
           ++P+L DS KPKD
Sbjct: 314 YDPILGDSGKPKD 326


>gb|PRQ29843.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 501

 Score = 92.4 bits (228), Expect(2) = 2e-33
 Identities = 45/68 (66%), Positives = 52/68 (76%)
 Frame = +3

Query: 243 GFELEENKYLVCKLKKSLYNLKQASRQWYKKFDSFIGSQFLKRTLAYPYIYLKSFDNGVF 422
           GFE+E  +++VCKLKKSLY LKQA RQWYKKFDSF+     KRT A P +YL+ F  G F
Sbjct: 114 GFEVERKQHMVCKLKKSLYGLKQAPRQWYKKFDSFMVGHGYKRTDADPCVYLQRFTGGNF 173

Query: 423 IILLLYVD 446
           IILLLYVD
Sbjct: 174 IILLLYVD 181



 Score = 79.7 bits (195), Expect(2) = 2e-33
 Identities = 37/69 (53%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
 Frame = +2

Query: 2   FKLKKD-NDKMVKYKARLVVKKIYLEKSVDFNEIFSPFIKMCSIRVVLRLATNLNFEIEQ 178
           FKLK+D N+++ K+KARLVVK    ++ +DF+EIFSP +KM SIR++L +A +++ E+EQ
Sbjct: 32  FKLKRDENEQLTKFKARLVVKGFGQKEGIDFDEIFSPVVKMTSIRIILGMAASMDLEVEQ 91

Query: 179 FDVNTIFLH 205
            DV T FLH
Sbjct: 92  LDVKTAFLH 100


>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
          Length = 687

 Score = 85.9 bits (211), Expect(2) = 3e-33
 Identities = 42/68 (61%), Positives = 53/68 (77%)
 Frame = +2

Query: 2   FKLKKDNDKMVKYKARLVVKKIYLEKSVDFNEIFSPFIKMCSIRVVLRLATNLNFEIEQF 181
           FK KKD +K+VK KARLVVK  + +K +DF+EIF+P +KM SIR++L LAT LN E+EQ 
Sbjct: 222 FKNKKDGNKLVKRKARLVVKGCHQKKGIDFDEIFAPVVKMTSIRMILGLATCLNLELEQL 281

Query: 182 DVNTIFLH 205
           DV T FLH
Sbjct: 282 DVKTAFLH 289



 Score = 85.9 bits (211), Expect(2) = 3e-33
 Identities = 41/68 (60%), Positives = 48/68 (70%)
 Frame = +3

Query: 243 GFELEENKYLVCKLKKSLYNLKQASRQWYKKFDSFIGSQFLKRTLAYPYIYLKSFDNGVF 422
           GFE++  +  VCKLKKSLY LKQA RQWY KFDSF+ +   KRT A P +Y + F  G F
Sbjct: 303 GFEVKGKENFVCKLKKSLYGLKQAPRQWYHKFDSFMSNNEYKRTTADPCVYFRKFSEGNF 362

Query: 423 IILLLYVD 446
           IIL LYVD
Sbjct: 363 IILCLYVD 370


>gb|PRQ60431.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1340

 Score = 91.7 bits (226), Expect(2) = 4e-33
 Identities = 45/68 (66%), Positives = 52/68 (76%)
 Frame = +3

Query: 243  GFELEENKYLVCKLKKSLYNLKQASRQWYKKFDSFIGSQFLKRTLAYPYIYLKSFDNGVF 422
            GFE+E  +++VCKLKKSLY LKQA RQWYKKFDSF+     KRT A P +YL+ F  G F
Sbjct: 953  GFEVEGKQHMVCKLKKSLYGLKQAPRQWYKKFDSFMVGHGYKRTDADPCVYLQRFTGGNF 1012

Query: 423  IILLLYVD 446
            IILLLYVD
Sbjct: 1013 IILLLYVD 1020



 Score = 79.7 bits (195), Expect(2) = 4e-33
 Identities = 37/69 (53%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
 Frame = +2

Query: 2    FKLKKD-NDKMVKYKARLVVKKIYLEKSVDFNEIFSPFIKMCSIRVVLRLATNLNFEIEQ 178
            FKLK+D N+++ K+KARLVVK    ++ +DF+EIFSP +KM SIR++L +A +++ E+EQ
Sbjct: 871  FKLKRDENEQLTKFKARLVVKGFGQKEGIDFDEIFSPVVKMTSIRIILGMAASMDLEVEQ 930

Query: 179  FDVNTIFLH 205
             DV T FLH
Sbjct: 931  LDVKTAFLH 939



 Score = 68.6 bits (166), Expect = 7e-09
 Identities = 35/95 (36%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
 Frame = +1

Query: 631 RLDRKALNITKKWVDISVVHQVEHKRQTL-LGKKLVDQYERKTAMNKTIAIRKVSNLKDK 807
           +++RKA+   ++WVD SV H V ++     L  KL   +E+KTA  K   I+++ N+K K
Sbjct: 53  KMNRKAIGYIREWVDDSVFHHVSNETNARELWLKLTSLFEKKTAAKKAFLIKELVNMKYK 112

Query: 808 DGQSIAEHLSD**DLLNQLTTIKVNLGDKVTALFL 912
           DG  + EHL++    +NQL T+ + + D++ AL L
Sbjct: 113 DGVRVTEHLNNFQSTINQLATMDMKIDDELQALLL 147


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease
 emb|CAA32025.1| unnamed protein product [Nicotiana tabacum]
          Length = 1328

 Score = 86.3 bits (212), Expect(2) = 4e-33
 Identities = 43/69 (62%), Positives = 53/69 (76%), Gaps = 1/69 (1%)
 Frame = +2

Query: 2    FKLKKDND-KMVKYKARLVVKKIYLEKSVDFNEIFSPFIKMCSIRVVLRLATNLNFEIEQ 178
            FKLKKD D K+V+YKARLVVK    +K +DF+EIFSP +KM SIR +L LA +L+ E+EQ
Sbjct: 861  FKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQ 920

Query: 179  FDVNTIFLH 205
             DV T FLH
Sbjct: 921  LDVKTAFLH 929



 Score = 85.1 bits (209), Expect(2) = 4e-33
 Identities = 41/68 (60%), Positives = 48/68 (70%)
 Frame = +3

Query: 243  GFELEENKYLVCKLKKSLYNLKQASRQWYKKFDSFIGSQFLKRTLAYPYIYLKSFDNGVF 422
            GFE+   K++VCKL KSLY LKQA RQWY KFDSF+ SQ   +T + P +Y K F    F
Sbjct: 943  GFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNF 1002

Query: 423  IILLLYVD 446
            IILLLYVD
Sbjct: 1003 IILLLYVD 1010


>gb|PKI75267.1| hypothetical protein CRG98_004307 [Punica granatum]
          Length = 801

 Score = 80.5 bits (197), Expect(2) = 9e-29
 Identities = 38/68 (55%), Positives = 51/68 (75%)
 Frame = +3

Query: 243 GFELEENKYLVCKLKKSLYNLKQASRQWYKKFDSFIGSQFLKRTLAYPYIYLKSFDNGVF 422
           GF ++  K+LVC+L+KSLY LKQA RQWY+ FDSF+ +   KRT +   +++K F +G F
Sbjct: 543 GFRVKCKKHLVCRLRKSLYGLKQAPRQWYRMFDSFMLNHGYKRTTSDHCVFVKQFSDGDF 602

Query: 423 IILLLYVD 446
           IILLLYVD
Sbjct: 603 IILLLYVD 610



 Score = 76.3 bits (186), Expect(2) = 9e-29
 Identities = 39/57 (68%), Positives = 43/57 (75%)
 Frame = +2

Query: 35  KYKARLVVKKIYLEKSVDFNEIFSPFIKMCSIRVVLRLATNLNFEIEQFDVNTIFLH 205
           +YKARLVVK    +K VDF EIFSP +KM SIRVVL LA +LN EIEQ DV T FLH
Sbjct: 473 RYKARLVVKGFNQKKGVDFEEIFSPVVKMSSIRVVLALADSLNLEIEQLDVKTTFLH 529


>gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1314

 Score = 80.1 bits (196), Expect(2) = 1e-28
 Identities = 38/68 (55%), Positives = 49/68 (72%)
 Frame = +3

Query: 243  GFELEENKYLVCKLKKSLYNLKQASRQWYKKFDSFIGSQFLKRTLAYPYIYLKSFDNGVF 422
            GF     ++LVC+LKKSLY LKQA RQWYKKFD F+     K+T A   +++K+++NG  
Sbjct: 928  GFAEPGKEHLVCRLKKSLYGLKQAPRQWYKKFDLFMAQHNFKKTSADQCVFVKNYENGES 987

Query: 423  IILLLYVD 446
            IILLLYVD
Sbjct: 988  IILLLYVD 995



 Score = 75.9 bits (185), Expect(2) = 1e-28
 Identities = 39/69 (56%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
 Frame = +2

Query: 2    FKLK-KDNDKMVKYKARLVVKKIYLEKSVDFNEIFSPFIKMCSIRVVLRLATNLNFEIEQ 178
            FKLK ++N+   +YKAR+VVK    +K +DF EIFSP +KM SIR +L LA  L+ EIEQ
Sbjct: 846  FKLKTEENNTKPRYKARIVVKGCNQKKGIDFEEIFSPVVKMTSIRAILGLAAKLDLEIEQ 905

Query: 179  FDVNTIFLH 205
             DV T FLH
Sbjct: 906  LDVKTAFLH 914



 Score = 55.5 bits (132), Expect(2) = 9e-07
 Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
 Frame = +1

Query: 604 KG*SDDMGRRLDRKALNITKKWVDISVVHQVE-HKRQTLLGKKLVDQYERKTAMNKTIAI 780
           +G +D     L+RKA+ + +K++D S+   V  +     L  KL    ++KT  NK    
Sbjct: 36  EGKTDKDWEILNRKAVAVIRKYIDRSLFEHVSTYTNAYELWTKLESLIQKKTPRNKAHLY 95

Query: 781 RKVSNLKDKDGQSIAEHLSD**DLLNQLTTIKVNLGDKVTALFL 912
           R+++ L+  DGQ++ EHL+    L+NQL   ++N+ D+V  L L
Sbjct: 96  RRLAKLEYMDGQNMIEHLNTFKGLVNQLKKAEINIDDEVQTLML 139



 Score = 26.9 bits (58), Expect(2) = 9e-07
 Identities = 13/20 (65%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +3

Query: 519 MIKLTAYNYSIWL-MMKDHL 575
           M KLTA N+S W  MM+DHL
Sbjct: 1   MFKLTADNFSYWKPMMEDHL 20


>gb|KYP60296.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 990

 Score = 79.0 bits (193), Expect(2) = 3e-28
 Identities = 41/69 (59%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
 Frame = +2

Query: 2   FKLKKD-NDKMVKYKARLVVKKIYLEKSVDFNEIFSPFIKMCSIRVVLRLATNLNFEIEQ 178
           F++K++ N    +YKARLVVK     K VDFNEIFSP +KM SIR VL LA  LN E+EQ
Sbjct: 781 FRVKQESNSTSPRYKARLVVKGFRQRKGVDFNEIFSPVVKMSSIRAVLSLAATLNLEVEQ 840

Query: 179 FDVNTIFLH 205
            DV T FLH
Sbjct: 841 MDVKTAFLH 849



 Score = 76.3 bits (186), Expect(2) = 3e-28
 Identities = 36/68 (52%), Positives = 50/68 (73%)
 Frame = +3

Query: 243  GFELEENKYLVCKLKKSLYNLKQASRQWYKKFDSFIGSQFLKRTLAYPYIYLKSFDNGVF 422
            GF+++  +  VC+L+KSLY LKQA RQWYKKF+SF+  Q  K+T +   +++K F +  F
Sbjct: 863  GFQVKGKEDCVCRLRKSLYGLKQAPRQWYKKFESFMCEQGYKKTTSDHCVFVKMFSDDDF 922

Query: 423  IILLLYVD 446
            IILLLYVD
Sbjct: 923  IILLLYVD 930


>gb|KYP41607.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 230

 Score = 77.8 bits (190), Expect(3) = 2e-27
 Identities = 40/70 (57%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
 Frame = +2

Query: 2   FKLKKD-NDKMVKYKARLVVKKIYLEKSVDFNEIFSPFIKMCSIRVVLRLATNLNFEIEQ 178
           F++K++ N    +YKARLVVK     K VDFNEI SP +KM SIR VL LA  L+ E+EQ
Sbjct: 36  FRVKQEINSTSPRYKARLVVKGFRKTKGVDFNEILSPMVKMSSIREVLSLAATLDLEVEQ 95

Query: 179 FDVNTIFLHD 208
            DV T+FLHD
Sbjct: 96  MDVKTVFLHD 105



 Score = 74.3 bits (181), Expect(3) = 2e-27
 Identities = 35/68 (51%), Positives = 48/68 (70%)
 Frame = +3

Query: 243 GFELEENKYLVCKLKKSLYNLKQASRQWYKKFDSFIGSQFLKRTLAYPYIYLKSFDNGVF 422
           GF+++  +  VC+L+KSLY LKQ  RQWYKKF+SF+  Q  K T +   +++K F +  F
Sbjct: 118 GFQVKGKEDCVCRLRKSLYGLKQTRRQWYKKFESFMCEQGYKNTTSDHCVFVKKFSDDDF 177

Query: 423 IILLLYVD 446
           IILLLYVD
Sbjct: 178 IILLLYVD 185



 Score = 20.4 bits (41), Expect(3) = 2e-27
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 208 HIKEKIYIN*PEGLSLK 258
           +++E+IYI  P G  +K
Sbjct: 106 YLEEEIYIKQPNGFQVK 122


>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
          Length = 1556

 Score = 76.6 bits (187), Expect(2) = 6e-27
 Identities = 37/65 (56%), Positives = 45/65 (69%)
 Frame = +2

Query: 11   KKDNDKMVKYKARLVVKKIYLEKSVDFNEIFSPFIKMCSIRVVLRLATNLNFEIEQFDVN 190
            ++ N    +YKARLVVK     K +DFNEIFSP +KM SIR+VL LA  L+ E+EQ DV 
Sbjct: 809  QESNSTSPRYKARLVVKGFRQRKGIDFNEIFSPVVKMSSIRIVLSLAATLDLEVEQMDVK 868

Query: 191  TIFLH 205
            T FLH
Sbjct: 869  TAFLH 873



 Score = 73.9 bits (180), Expect(2) = 6e-27
 Identities = 37/68 (54%), Positives = 48/68 (70%)
 Frame = +3

Query: 243  GFELEENKYLVCKLKKSLYNLKQASRQWYKKFDSFIGSQFLKRTLAYPYIYLKSFDNGVF 422
            GF +E  +  VC+L+KSLY LKQA RQWYKKF+S +  Q  K+T +   +++K F N  F
Sbjct: 887  GFLVEGKEDHVCRLRKSLYGLKQAPRQWYKKFESVMCEQGYKKTTSDHCVFVKKFANDDF 946

Query: 423  IILLLYVD 446
            IILLLYVD
Sbjct: 947  IILLLYVD 954


>gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1305

 Score = 75.5 bits (184), Expect(2) = 6e-27
 Identities = 35/68 (51%), Positives = 49/68 (72%)
 Frame = +3

Query: 243  GFELEENKYLVCKLKKSLYNLKQASRQWYKKFDSFIGSQFLKRTLAYPYIYLKSFDNGVF 422
            GF++   + LVC+L KSLY LKQA RQWYKKF+SF+     K+T +   +++K + +G F
Sbjct: 918  GFKVPGKENLVCRLTKSLYGLKQAPRQWYKKFESFMAEHEFKKTESDHCVFIKRYASGDF 977

Query: 423  IILLLYVD 446
            +ILLLYVD
Sbjct: 978  LILLLYVD 985



 Score = 75.1 bits (183), Expect(2) = 6e-27
 Identities = 37/64 (57%), Positives = 45/64 (70%)
 Frame = +2

Query: 14   KDNDKMVKYKARLVVKKIYLEKSVDFNEIFSPFIKMCSIRVVLRLATNLNFEIEQFDVNT 193
            +DN+   +YKARLVVK    EK +DF EIFSP +KM SIRV+L +A   + EIEQ DV T
Sbjct: 841  EDNNTKPRYKARLVVKGFGQEKGIDFEEIFSPVVKMSSIRVILGIAATQDLEIEQLDVKT 900

Query: 194  IFLH 205
             FLH
Sbjct: 901  AFLH 904



 Score = 62.0 bits (149), Expect(2) = 3e-09
 Identities = 37/104 (35%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
 Frame = +1

Query: 604 KG*SDDMGRRLDRKALNITKKWVDISVVHQVE-HKRQTLLGKKLVDQYERKTAMNKTIAI 780
           +G SD     L+RKA+ + +K++D S+   V  +     L  KL    ++KT  NK   +
Sbjct: 46  EGKSDAQWELLNRKAVAMIRKYIDKSLFEHVSTYTNAYELWAKLESMIQKKTPRNKANLV 105

Query: 781 RKVSNLKDKDGQSIAEHLSD**DLLNQLTTIKVNLGDKVTALFL 912
           R++  L+ KDG S+ EHL++   L+NQLT I++ + D++ AL L
Sbjct: 106 RRLVKLEYKDGHSMIEHLNNFKGLVNQLTKIEMKIDDELQALLL 149



 Score = 28.9 bits (63), Expect(2) = 3e-09
 Identities = 14/20 (70%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +3

Query: 519 MIKLTAYNYSIWL-MMKDHL 575
           M KLTA NYS W  MM+DHL
Sbjct: 11  MFKLTANNYSYWKPMMEDHL 30


>gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1305

 Score = 75.5 bits (184), Expect(2) = 6e-27
 Identities = 35/68 (51%), Positives = 49/68 (72%)
 Frame = +3

Query: 243  GFELEENKYLVCKLKKSLYNLKQASRQWYKKFDSFIGSQFLKRTLAYPYIYLKSFDNGVF 422
            GF++   + LVC+L KSLY LKQA RQWYKKF+SF+     K+T +   +++K + +G F
Sbjct: 918  GFKVPGKENLVCRLTKSLYGLKQAPRQWYKKFESFMAEHEFKKTESDHCVFIKRYASGDF 977

Query: 423  IILLLYVD 446
            +ILLLYVD
Sbjct: 978  LILLLYVD 985



 Score = 75.1 bits (183), Expect(2) = 6e-27
 Identities = 37/64 (57%), Positives = 45/64 (70%)
 Frame = +2

Query: 14   KDNDKMVKYKARLVVKKIYLEKSVDFNEIFSPFIKMCSIRVVLRLATNLNFEIEQFDVNT 193
            +DN+   +YKARLVVK    EK +DF EIFSP +KM SIRV+L +A   + EIEQ DV T
Sbjct: 841  EDNNTKPRYKARLVVKGFGQEKGIDFEEIFSPVVKMSSIRVILGIAATQDLEIEQLDVKT 900

Query: 194  IFLH 205
             FLH
Sbjct: 901  AFLH 904



 Score = 62.0 bits (149), Expect(2) = 3e-09
 Identities = 37/104 (35%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
 Frame = +1

Query: 604 KG*SDDMGRRLDRKALNITKKWVDISVVHQVE-HKRQTLLGKKLVDQYERKTAMNKTIAI 780
           +G SD     L+RKA+ + +K++D S+   V  +     L  KL    ++KT  NK   +
Sbjct: 46  EGKSDAQWELLNRKAVAMIRKYIDKSLFEHVSTYTNAYELWAKLESMIQKKTPRNKANLV 105

Query: 781 RKVSNLKDKDGQSIAEHLSD**DLLNQLTTIKVNLGDKVTALFL 912
           R++  L+ KDG S+ EHL++   L+NQLT I++ + D++ AL L
Sbjct: 106 RRLVKLEYKDGHSMIEHLNNFKGLVNQLTKIEMKIDDELQALLL 149



 Score = 28.9 bits (63), Expect(2) = 3e-09
 Identities = 14/20 (70%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +3

Query: 519 MIKLTAYNYSIWL-MMKDHL 575
           M KLTA NYS W  MM+DHL
Sbjct: 11  MFKLTANNYSYWKPMMEDHL 30


>gb|KYP77046.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 382

 Score = 77.0 bits (188), Expect(2) = 1e-26
 Identities = 40/69 (57%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
 Frame = +2

Query: 2   FKLKKD-NDKMVKYKARLVVKKIYLEKSVDFNEIFSPFIKMCSIRVVLRLATNLNFEIEQ 178
           FK+K++ N    +YKARLVVK     K VDFNEIFSP ++M SIR VL LA  L+ E+EQ
Sbjct: 37  FKVKQESNSTSPRYKARLVVKGFRQRKGVDFNEIFSPVVRMTSIRTVLSLAATLDLEVEQ 96

Query: 179 FDVNTIFLH 205
            DV T FLH
Sbjct: 97  MDVKTTFLH 105



 Score = 72.8 bits (177), Expect(2) = 1e-26
 Identities = 35/68 (51%), Positives = 48/68 (70%)
 Frame = +3

Query: 243 GFELEENKYLVCKLKKSLYNLKQASRQWYKKFDSFIGSQFLKRTLAYPYIYLKSFDNGVF 422
           GF +E  +  VC+L+KSLY LKQA RQWYKKF+S +  Q  K+T +   ++++ F +  F
Sbjct: 119 GFLIEGKEDYVCRLRKSLYGLKQAPRQWYKKFESVMCEQGYKKTTSDHCVFVRKFSDDDF 178

Query: 423 IILLLYVD 446
           IILLLYVD
Sbjct: 179 IILLLYVD 186


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score = 77.4 bits (189), Expect(2) = 1e-26
 Identities = 39/69 (56%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
 Frame = +2

Query: 2    FKLKKD-NDKMVKYKARLVVKKIYLEKSVDFNEIFSPFIKMCSIRVVLRLATNLNFEIEQ 178
            FK+K D ++ + ++KARLVVK     K +DF+EIFSP +KM SIR VL LA +LN E+EQ
Sbjct: 862  FKMKHDEHNSLPRFKARLVVKGFNQRKGIDFDEIFSPVVKMTSIRTVLGLAASLNLEVEQ 921

Query: 179  FDVNTIFLH 205
             DV T FLH
Sbjct: 922  MDVKTAFLH 930



 Score = 72.0 bits (175), Expect(2) = 1e-26
 Identities = 34/68 (50%), Positives = 47/68 (69%)
 Frame = +3

Query: 243  GFELEENKYLVCKLKKSLYNLKQASRQWYKKFDSFIGSQFLKRTLAYPYIYLKSFDNGVF 422
            GF+ +  +  VC+L+KSLY LKQA RQWYKKF+S +G    K+T +   ++ + F +  F
Sbjct: 944  GFQQKGKEDYVCRLRKSLYGLKQAPRQWYKKFESVMGQHGYKKTTSDHCVFAQKFSDDDF 1003

Query: 423  IILLLYVD 446
            IILLLYVD
Sbjct: 1004 IILLLYVD 1011


>gb|KYP42630.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 701

 Score = 75.5 bits (184), Expect(2) = 2e-26
 Identities = 37/68 (54%), Positives = 49/68 (72%)
 Frame = +3

Query: 243 GFELEENKYLVCKLKKSLYNLKQASRQWYKKFDSFIGSQFLKRTLAYPYIYLKSFDNGVF 422
           GF +E  +  VC+L+KSLY LKQA RQWYKKF+SF+  Q  K+T +   +++K F +  F
Sbjct: 367 GFLVEGKEDHVCRLRKSLYGLKQAPRQWYKKFESFMCEQGYKKTTSDHCVFVKKFSDDDF 426

Query: 423 IILLLYVD 446
           IILLLYVD
Sbjct: 427 IILLLYVD 434



 Score = 73.6 bits (179), Expect(2) = 2e-26
 Identities = 38/69 (55%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
 Frame = +2

Query: 2   FKLKKD-NDKMVKYKARLVVKKIYLEKSVDFNEIFSPFIKMCSIRVVLRLATNLNFEIEQ 178
           F++K++ N    +YKARLVVK       VDFNEIFSP +KM SIR VL L   L+ E+EQ
Sbjct: 285 FRVKQESNSTSPRYKARLVVKGFRQRNDVDFNEIFSPVVKMSSIRTVLSLVATLDLEVEQ 344

Query: 179 FDVNTIFLH 205
            DV T FLH
Sbjct: 345 MDVKTAFLH 353


>gb|KYP50580.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 478

 Score = 76.3 bits (186), Expect(2) = 2e-26
 Identities = 40/69 (57%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
 Frame = +2

Query: 2   FKLKKD-NDKMVKYKARLVVKKIYLEKSVDFNEIFSPFIKMCSIRVVLRLATNLNFEIEQ 178
           FK+K++ N     YKARLVVK     K VDFNEIFSP ++M SIR +L LAT L+ E+E+
Sbjct: 58  FKVKQESNSTSPIYKARLVVKGFRQRKGVDFNEIFSPVVRMSSIRTMLSLATTLDLEVEK 117

Query: 179 FDVNTIFLH 205
            DV TIFLH
Sbjct: 118 MDVKTIFLH 126



 Score = 72.8 bits (177), Expect(2) = 2e-26
 Identities = 35/68 (51%), Positives = 48/68 (70%)
 Frame = +3

Query: 243 GFELEENKYLVCKLKKSLYNLKQASRQWYKKFDSFIGSQFLKRTLAYPYIYLKSFDNGVF 422
           GF +E  +  VC+L+KSLY LKQA RQWYKKF+S +  Q  K+T +   ++++ F +  F
Sbjct: 140 GFLIEGKEDYVCRLRKSLYGLKQAPRQWYKKFESVMCEQDYKKTTSDHCVFVRKFSDDDF 199

Query: 423 IILLLYVD 446
           IILLLYVD
Sbjct: 200 IILLLYVD 207


>gb|KYP42640.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 448

 Score = 75.5 bits (184), Expect(2) = 2e-26
 Identities = 37/68 (54%), Positives = 49/68 (72%)
 Frame = +3

Query: 243 GFELEENKYLVCKLKKSLYNLKQASRQWYKKFDSFIGSQFLKRTLAYPYIYLKSFDNGVF 422
           GF +E  +  VC+L+KSLY LKQA RQWYKKF+SF+  Q  K+T +   +++K F +  F
Sbjct: 114 GFLVEGKEDHVCRLRKSLYGLKQAPRQWYKKFESFMCEQGYKKTTSDHCVFVKKFSDDDF 173

Query: 423 IILLLYVD 446
           IILLLYVD
Sbjct: 174 IILLLYVD 181



 Score = 73.6 bits (179), Expect(2) = 2e-26
 Identities = 38/69 (55%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
 Frame = +2

Query: 2   FKLKKD-NDKMVKYKARLVVKKIYLEKSVDFNEIFSPFIKMCSIRVVLRLATNLNFEIEQ 178
           F++K++ N    +YKARLVVK       VDFNEIFSP +KM SIR VL L   L+ E+EQ
Sbjct: 32  FRVKQESNSTSPRYKARLVVKGFRQRNDVDFNEIFSPVVKMSSIRTVLSLVATLDLEVEQ 91

Query: 179 FDVNTIFLH 205
            DV T FLH
Sbjct: 92  MDVKTAFLH 100


>gb|KYP65438.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 320

 Score = 77.4 bits (189), Expect(2) = 2e-26
 Identities = 39/69 (56%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
 Frame = +2

Query: 2   FKLKKD-NDKMVKYKARLVVKKIYLEKSVDFNEIFSPFIKMCSIRVVLRLATNLNFEIEQ 178
           F++K++ N    +YKARLVVK     K VDFNEIFSP +KM SIR VL LA  L+ E+EQ
Sbjct: 32  FRVKQESNSTSPRYKARLVVKGFRQRKGVDFNEIFSPVVKMSSIRAVLSLAATLDLEVEQ 91

Query: 179 FDVNTIFLH 205
            D+ T+FLH
Sbjct: 92  MDMKTVFLH 100



 Score = 71.6 bits (174), Expect(2) = 2e-26
 Identities = 34/58 (58%), Positives = 44/58 (75%)
 Frame = +3

Query: 273 VCKLKKSLYNLKQASRQWYKKFDSFIGSQFLKRTLAYPYIYLKSFDNGVFIILLLYVD 446
           VC+L+KSLY LKQA RQWY KF+SF+  Q  K+T++   I++K F +  FIILLLYVD
Sbjct: 124 VCRLRKSLYGLKQAPRQWYMKFESFMCEQGYKKTISDHCIFVKKFSDDDFIILLLYVD 181