BLASTX nr result

ID: Cheilocostus21_contig00065740 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00065740
         (534 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OAY76838.1| hypothetical protein ACMD2_17805 [Ananas comosus]       57   4e-06

>gb|OAY76838.1| hypothetical protein ACMD2_17805 [Ananas comosus]
          Length = 643

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
 Frame = -1

Query: 402 TLMCNA*TG*T*I*IINFFVY*NHKIVFYKLIYASTQYHNVVYICQQTKDV-QEIDPHCI 226
           TLMC++ TG T + IINF +Y N K++F+KLI A+ ++ +  YI    + V +E+   C+
Sbjct: 524 TLMCDSWTGQTKMSIINFLIYCNGKVIFHKLIDATGRFEDADYIYALLEQVLREVGEKCV 583

Query: 225 VSIYIALVCNITNSKKVRQDNFLHLFQNP 139
           V I +    N   + K+      HLF  P
Sbjct: 584 VQIVLDNSANFKKAGKLLMQRHPHLFWTP 612


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