BLASTX nr result
ID: Cheilocostus21_contig00065673
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00065673
(484 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN60751.1| hypothetical protein VITISV_044288 [Vitis vinifera] 84 3e-24
emb|CAN66871.1| hypothetical protein VITISV_021425 [Vitis vinifera] 74 6e-22
emb|CAN82144.1| hypothetical protein VITISV_043495 [Vitis vinifera] 79 6e-21
gb|KYP38573.1| Retrovirus-related Pol polyprotein from transposo... 78 8e-21
gb|KYP64149.1| Retrovirus-related Pol polyprotein from transposo... 78 1e-20
gb|KYP58379.1| Retrovirus-related Pol polyprotein from transposo... 79 1e-20
gb|KYP76948.1| Retrovirus-related Pol polyprotein from transposo... 77 1e-20
gb|KYP60990.1| Retrovirus-related Pol polyprotein from transposo... 78 3e-20
gb|KYP34496.1| Transposon Ty3-G Gag-Pol polyprotein, partial [Ca... 75 7e-20
gb|KYP39385.1| Retrovirus-related Pol polyprotein from transposo... 75 7e-20
dbj|GAU35153.1| hypothetical protein TSUD_217860 [Trifolium subt... 80 9e-20
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera] 81 3e-19
gb|KYP41330.1| Retrovirus-related Pol polyprotein from transposo... 74 2e-18
gb|KYP33156.1| Retrovirus-related Pol polyprotein from transposo... 74 2e-18
gb|KYP76789.1| Retrovirus-related Pol polyprotein from transposo... 74 2e-18
gb|KYP43166.1| Retrovirus-related Pol polyprotein from transposo... 72 4e-18
gb|KYP53945.1| Retrovirus-related Pol polyprotein from transposo... 75 5e-18
gb|KYP56111.1| Retrovirus-related Pol polyprotein from transposo... 70 5e-18
gb|KYP52821.1| Copia protein [Cajanus cajan] 72 1e-17
gb|KYP41992.1| Retrovirus-related Pol polyprotein from transposo... 70 1e-17
>emb|CAN60751.1| hypothetical protein VITISV_044288 [Vitis vinifera]
Length = 633
Score = 83.6 bits (205), Expect(3) = 3e-24
Identities = 40/78 (51%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
Frame = -1
Query: 376 VQAKRGVERIHEVLCVFDLDQNLLSVGQLAEHKYALHFEANCCTIFDKKEKKVILAKVEM 197
+Q K G + I +VL + L+QNLLSVGQL EH Y LHFE N CTI+DK++++ ++ K++M
Sbjct: 106 IQTKVGTKYIRDVLLIPALEQNLLSVGQLVEHGYKLHFEDNECTIYDKEQRRNLVKKIKM 165
Query: 196 -MNRCFPLEFKYAKDVAM 146
NR FP+ FKY ++VA+
Sbjct: 166 EKNRSFPIVFKYVENVAL 183
Score = 50.1 bits (118), Expect(3) = 3e-24
Identities = 22/40 (55%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Frame = -2
Query: 117 WHKRLGHLNFGGLKLLHEKGMV*GL-LFIYDKSEICEGCA 1
WH+R GHLNF LK+L ++ MV GL I +K+E+C+GCA
Sbjct: 194 WHRRFGHLNFNSLKMLCQRKMVQGLPNIIEEKNEVCDGCA 233
Score = 25.8 bits (55), Expect(3) = 3e-24
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -3
Query: 482 ITANKNIFIVLDNTFQSKVKV 420
+T NKNIF+ +D S+VK+
Sbjct: 70 MTGNKNIFLDMDTNINSQVKM 90
>emb|CAN66871.1| hypothetical protein VITISV_021425 [Vitis vinifera]
Length = 338
Score = 73.6 bits (179), Expect(3) = 6e-22
Identities = 34/60 (56%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Frame = -1
Query: 322 LDQNLLSVGQLAEHKYALHFEANCCTIFDKKEKKVILAKVEM-MNRCFPLEFKYAKDVAM 146
L+QNLLSVGQL EH Y LHFE N CTI+D ++++ ++ K++M NR FP+ FKYA++VA+
Sbjct: 118 LEQNLLSVGQLVEHGYKLHFEYNECTIYDNEQRRNLVKKIKMEKNRSFPIVFKYAENVAL 177
Score = 51.2 bits (121), Expect(3) = 6e-22
Identities = 22/40 (55%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = -2
Query: 117 WHKRLGHLNFGGLKLLHEKGMV*GL-LFIYDKSEICEGCA 1
WH+R GHLNF LK+L+++ MV GL I +K+E+C+GCA
Sbjct: 188 WHRRFGHLNFNSLKMLYQRKMVQGLPNTIEEKNEVCDGCA 227
Score = 26.9 bits (58), Expect(3) = 6e-22
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3
Query: 482 ITANKNIFIVLDNTFQSKVKVEMVSSCK 399
+T NKNIF+ +D T S+ K ++ K
Sbjct: 89 MTGNKNIFLDMDTTINSQGKAQLAFKLK 116
>emb|CAN82144.1| hypothetical protein VITISV_043495 [Vitis vinifera]
Length = 567
Score = 78.6 bits (192), Expect(3) = 6e-21
Identities = 38/78 (48%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Frame = -1
Query: 376 VQAKRGVERIHEVLCVFDLDQNLLSVGQLAEHKYALHFEANCCTIFDKKEKKVILAKVEM 197
+Q K G + I +VL V L +NLLSVGQL EH Y LHFE N C I+DK++++ ++ K++M
Sbjct: 37 IQTKVGTKHIRDVLLVLVLKKNLLSVGQLVEHGYKLHFEDNECIIYDKEKRRNLVKKIKM 96
Query: 196 -MNRCFPLEFKYAKDVAM 146
N+ P+ FKYA++VA+
Sbjct: 97 EKNKSIPIVFKYAENVAL 114
Score = 42.7 bits (99), Expect(3) = 6e-21
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = -2
Query: 117 WHKRLGHLNFGGLKLLHEKGMV*GL-LFIYDKSEICEGC 4
WH+R GHLNF LK+L ++ MV L I +K+EICE C
Sbjct: 125 WHRRFGHLNFNRLKMLCQRKMVQRLPNTIEEKNEICEDC 163
Score = 26.9 bits (58), Expect(3) = 6e-21
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -3
Query: 482 ITANKNIFIVLDNTFQSKVKV 420
+T NKNIF+ +D T S+VK+
Sbjct: 1 MTXNKNIFLDMDTTIXSQVKM 21
>gb|KYP38573.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 1120
Score = 77.8 bits (190), Expect(2) = 8e-21
Identities = 38/86 (44%), Positives = 54/86 (62%)
Frame = -1
Query: 376 VQAKRGVERIHEVLCVFDLDQNLLSVGQLAEHKYALHFEANCCTIFDKKEKKVILAKVEM 197
V+ K+G I +VL V +L +NLLS+GQ+ E+ Y+LHFE + C I+D K ++ K+E
Sbjct: 281 VETKKGTRLIKDVLLVPNLKENLLSIGQMMENGYSLHFERDICKIYDSKRVEIGQVKMEK 340
Query: 196 MNRCFPLEFKYAKDVAMMVSGGVSWL 119
NR FPL F ++AM V SWL
Sbjct: 341 RNRIFPLSFNRGTNIAMNVEVDDSWL 366
Score = 50.1 bits (118), Expect(2) = 8e-21
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = -2
Query: 117 WHKRLGHLNFGGLKLLHEKGMV*GLLFIYDKSEICEGC 4
WH+R GH N LKLLH+KGM+ L + + +E CEGC
Sbjct: 367 WHRRFGHFNIHALKLLHQKGMMRDLPSLKENNEACEGC 404
>gb|KYP64149.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 339
Score = 77.8 bits (190), Expect(2) = 1e-20
Identities = 38/86 (44%), Positives = 54/86 (62%)
Frame = -1
Query: 376 VQAKRGVERIHEVLCVFDLDQNLLSVGQLAEHKYALHFEANCCTIFDKKEKKVILAKVEM 197
V+ K+G I +VL V +L +NLLS+GQ+ E+ Y+LHFE + C I+D K ++ K+E
Sbjct: 95 VETKKGTTLIKDVLLVPNLKENLLSIGQMMENGYSLHFERDICKIYDSKRVEIGQVKMEK 154
Query: 196 MNRCFPLEFKYAKDVAMMVSGGVSWL 119
NR FPL F ++AM V SWL
Sbjct: 155 RNRSFPLSFNRGTNIAMKVEVDDSWL 180
Score = 49.7 bits (117), Expect(2) = 1e-20
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = -2
Query: 117 WHKRLGHLNFGGLKLLHEKGMV*GLLFIYDKSEICEGC 4
WH+R GH N LKLLH+KGM+ L + + +E CEGC
Sbjct: 181 WHRRFGHFNIHALKLLHQKGMMRDLPNLKENNEACEGC 218
>gb|KYP58379.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 503
Score = 78.6 bits (192), Expect(2) = 1e-20
Identities = 37/86 (43%), Positives = 55/86 (63%)
Frame = -1
Query: 376 VQAKRGVERIHEVLCVFDLDQNLLSVGQLAEHKYALHFEANCCTIFDKKEKKVILAKVEM 197
V+ K+G I ++L V +L +NLLS+GQ+ E+ Y+LHFE + C I+D K ++ K+E
Sbjct: 260 VETKKGTRLIKDMLLVPNLKENLLSIGQMMENGYSLHFERDICKIYDSKRVEIGQVKMEK 319
Query: 196 MNRCFPLEFKYAKDVAMMVSGGVSWL 119
NR FPL F + ++AM V SWL
Sbjct: 320 RNRSFPLSFNHGTNIAMKVEVDDSWL 345
Score = 48.5 bits (114), Expect(2) = 1e-20
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = -2
Query: 117 WHKRLGHLNFGGLKLLHEKGMV*GLLFIYDKSEICEGC 4
WH+R GH N LKLLH+KGM+ L + + E CEGC
Sbjct: 346 WHRRFGHFNIHALKLLHQKGMMRDLPNLKENIEACEGC 383
>gb|KYP76948.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 422
Score = 77.4 bits (189), Expect(2) = 1e-20
Identities = 38/86 (44%), Positives = 54/86 (62%)
Frame = -1
Query: 376 VQAKRGVERIHEVLCVFDLDQNLLSVGQLAEHKYALHFEANCCTIFDKKEKKVILAKVEM 197
V+ K+G I +VL V +L +NLLS+GQ+ E+ Y+LHFE + C I+D K ++ K+E
Sbjct: 224 VETKKGTRLIKDVLLVPNLKENLLSIGQMMENGYSLHFERDICKIYDSKRVEIGQVKMEK 283
Query: 196 MNRCFPLEFKYAKDVAMMVSGGVSWL 119
NR FPL F ++AM V SWL
Sbjct: 284 RNRSFPLSFNCGTNLAMKVEVDDSWL 309
Score = 49.7 bits (117), Expect(2) = 1e-20
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = -2
Query: 117 WHKRLGHLNFGGLKLLHEKGMV*GLLFIYDKSEICEGC 4
WH+R GH N LKLLH+KGM+ L + + +E CEGC
Sbjct: 310 WHRRFGHFNIHALKLLHQKGMMRDLPNLKENNEACEGC 347
>gb|KYP60990.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 441
Score = 78.2 bits (191), Expect(2) = 3e-20
Identities = 38/86 (44%), Positives = 54/86 (62%)
Frame = -1
Query: 376 VQAKRGVERIHEVLCVFDLDQNLLSVGQLAEHKYALHFEANCCTIFDKKEKKVILAKVEM 197
V+ K+G I +VL V +L +NLLS+GQ+ E+ Y+LHFE + C I+D K ++ K+E
Sbjct: 312 VETKKGTRLIKDVLLVPNLKENLLSIGQMMENGYSLHFERDICKIYDSKRVEIGQVKMEK 371
Query: 196 MNRCFPLEFKYAKDVAMMVSGGVSWL 119
NR FPL F ++AM V SWL
Sbjct: 372 RNRSFPLSFNRGTNIAMKVEVDNSWL 397
Score = 47.8 bits (112), Expect(2) = 3e-20
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = -2
Query: 117 WHKRLGHLNFGGLKLLHEKGMV*GLLFIYDKSEICEGC 4
WH R GH N LKLLH+KGM+ L + + +E CEGC
Sbjct: 398 WHWRFGHFNIHALKLLHQKGMMRDLPNLKENNEACEGC 435
>gb|KYP34496.1| Transposon Ty3-G Gag-Pol polyprotein, partial [Cajanus cajan]
Length = 1012
Score = 74.7 bits (182), Expect(2) = 7e-20
Identities = 36/86 (41%), Positives = 54/86 (62%)
Frame = -1
Query: 376 VQAKRGVERIHEVLCVFDLDQNLLSVGQLAEHKYALHFEANCCTIFDKKEKKVILAKVEM 197
V+ K+G I ++L V +L +NLLS+GQ E++Y+L FE + C I+D K KV K+E
Sbjct: 345 VETKKGTRLIKDILLVPNLKENLLSIGQKMENRYSLLFERDICKIYDSKRLKVGQVKMEK 404
Query: 196 MNRCFPLEFKYAKDVAMMVSGGVSWL 119
N+ FP+ FK ++AM + SWL
Sbjct: 405 RNKSFPISFKPGTNIAMKIEVDDSWL 430
Score = 50.1 bits (118), Expect(2) = 7e-20
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = -2
Query: 117 WHKRLGHLNFGGLKLLHEKGMV*GLLFIYDKSEICEGC 4
WH+R GH N LKLLH+KGM+ L + + +E CEGC
Sbjct: 431 WHRRFGHFNIHALKLLHQKGMMRDLPTLKENNEACEGC 468
>gb|KYP39385.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 723
Score = 74.7 bits (182), Expect(2) = 7e-20
Identities = 36/86 (41%), Positives = 54/86 (62%)
Frame = -1
Query: 376 VQAKRGVERIHEVLCVFDLDQNLLSVGQLAEHKYALHFEANCCTIFDKKEKKVILAKVEM 197
V+ K+G I ++L V +L +NLLS+GQ E++Y+L FE + C I+D K KV K+E
Sbjct: 344 VETKKGTRLIKDILLVPNLKENLLSIGQKMENRYSLLFERDICKIYDSKRLKVGQVKMEK 403
Query: 196 MNRCFPLEFKYAKDVAMMVSGGVSWL 119
N+ FP+ FK ++AM + SWL
Sbjct: 404 RNKSFPISFKPGTNIAMKIEVDDSWL 429
Score = 50.1 bits (118), Expect(2) = 7e-20
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = -2
Query: 117 WHKRLGHLNFGGLKLLHEKGMV*GLLFIYDKSEICEGC 4
WH+R GH N LKLLH+KGM+ L + + +E CEGC
Sbjct: 430 WHRRFGHFNIHALKLLHQKGMMRDLPTLKENNEACEGC 467
>dbj|GAU35153.1| hypothetical protein TSUD_217860 [Trifolium subterraneum]
Length = 858
Score = 80.5 bits (197), Expect(2) = 9e-20
Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Frame = -1
Query: 376 VQAKRGVERIHEVLCVFDLDQNLLSVGQLAEHKYALHFEANCCTIFDKKEKKVILAKVEM 197
V+ K+G I +VL V +L +NLLS+GQ+ E Y LHFE + C+I+D K+ +AKV+M
Sbjct: 379 VETKKGTRFIKDVLLVPNLKENLLSIGQMMEKGYTLHFEGDTCSIYDNSHKRHEIAKVKM 438
Query: 196 --MNRCFPLEFKYAKDVAMMVSGGVSWL 119
NR FP+ FKY ++A+ V SWL
Sbjct: 439 EKRNRSFPISFKYTTNIALKVQVDDSWL 466
Score = 43.9 bits (102), Expect(2) = 9e-20
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = -2
Query: 117 WHKRLGHLNFGGLKLLHEKGMV*GLLFIYDKSEICEG 7
WH+R GH N LK+L++K M+ L ++ + SE CEG
Sbjct: 467 WHRRFGHFNTQALKMLYQKNMMRNLPYLKENSEACEG 503
>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
Length = 1424
Score = 80.9 bits (198), Expect(3) = 3e-19
Identities = 40/78 (51%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Frame = -1
Query: 376 VQAKRGVERIHEVLCVFDLDQNLLSVGQLAEHKYALHFEANCCTIFDKKEKKVILAKVEM 197
+Q K G + I +VL V L+Q LLSVGQL EH Y LHFE N CTI+DK++++ ++ K++M
Sbjct: 466 IQXKVGTKYIRDVLLVPALEQXLLSVGQLVEHGYKLHFENNECTIYDKEQRRNLVKKIKM 525
Query: 196 -MNRCFPLEFKYAKDVAM 146
NR FP+ FKY ++VA+
Sbjct: 526 EKNRSFPIVFKYVENVAL 543
Score = 33.5 bits (75), Expect(3) = 3e-19
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -2
Query: 117 WHKRLGHLNFGGLKLLHEKGM 55
WH+R GHLNF LK+L ++ M
Sbjct: 554 WHRRFGHLNFNSLKMLCQRKM 574
Score = 28.1 bits (61), Expect(3) = 3e-19
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 482 ITANKNIFIVLDNTFQSKVKVEMVSSCK*KALGQLG 375
+T NKNIF+ +D T S+VK+ K G +G
Sbjct: 430 MTGNKNIFLDMDTTINSQVKMGNGDLVNVKGKGTVG 465
>gb|KYP41330.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 604
Score = 73.9 bits (180), Expect(2) = 2e-18
Identities = 35/86 (40%), Positives = 52/86 (60%)
Frame = -1
Query: 376 VQAKRGVERIHEVLCVFDLDQNLLSVGQLAEHKYALHFEANCCTIFDKKEKKVILAKVEM 197
V+ K+G I +VL V +L +NLLS+GQ+ E Y LHFE + C I+D K+ ++ K+E
Sbjct: 292 VETKKGTRLITDVLLVPNLKENLLSIGQMMEKGYTLHFEGDTCKIYDNKKLEIGRVKMEK 351
Query: 196 MNRCFPLEFKYAKDVAMMVSGGVSWL 119
NR FP+ + ++AM SWL
Sbjct: 352 RNRSFPISLRQGPNIAMKAEVDDSWL 377
Score = 45.8 bits (107), Expect(2) = 2e-18
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -2
Query: 117 WHKRLGHLNFGGLKLLHEKGMV*GLLFIYDKSEICEGC 4
WH+R GH N LKLL++K M+ L + + SE CEGC
Sbjct: 378 WHRRFGHFNTHALKLLYQKNMMRDLPCLKENSEACEGC 415
>gb|KYP33156.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 570
Score = 73.9 bits (180), Expect(2) = 2e-18
Identities = 35/86 (40%), Positives = 52/86 (60%)
Frame = -1
Query: 376 VQAKRGVERIHEVLCVFDLDQNLLSVGQLAEHKYALHFEANCCTIFDKKEKKVILAKVEM 197
V+ K+G I +VL V +L +NLLS+GQ+ E Y LHFE + C I+D K+ ++ K+E
Sbjct: 224 VETKKGTRLITDVLLVPNLKENLLSIGQMMEKGYTLHFEGDTCKIYDNKKLEIGRVKMEK 283
Query: 196 MNRCFPLEFKYAKDVAMMVSGGVSWL 119
NR FP+ + ++AM SWL
Sbjct: 284 RNRSFPISLRQGPNIAMKAEVDDSWL 309
Score = 45.8 bits (107), Expect(2) = 2e-18
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -2
Query: 117 WHKRLGHLNFGGLKLLHEKGMV*GLLFIYDKSEICEGC 4
WH+R GH N LKLL++K M+ L + + SE CEGC
Sbjct: 310 WHRRFGHFNTHALKLLYQKNMMRDLPCLKENSEACEGC 347
>gb|KYP76789.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 441
Score = 73.6 bits (179), Expect(2) = 2e-18
Identities = 35/86 (40%), Positives = 52/86 (60%)
Frame = -1
Query: 376 VQAKRGVERIHEVLCVFDLDQNLLSVGQLAEHKYALHFEANCCTIFDKKEKKVILAKVEM 197
V+ K+G I +VL V +L +NLLS+GQ+ E Y LHFE + C I+D K+ ++ K+E
Sbjct: 312 VEMKKGTRLITDVLLVPNLKENLLSIGQMMEKGYTLHFEGDTCKIYDNKKLEIGRVKMEK 371
Query: 196 MNRCFPLEFKYAKDVAMMVSGGVSWL 119
NR FP+ + ++AM SWL
Sbjct: 372 RNRSFPISLRQGPNIAMKAEVDDSWL 397
Score = 46.2 bits (108), Expect(2) = 2e-18
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -2
Query: 117 WHKRLGHLNFGGLKLLHEKGMV*GLLFIYDKSEICEGC 4
WH+R GH N LKLL++K M+ L + + SE CEGC
Sbjct: 398 WHRRFGHFNTHALKLLYQKNMMRDLSCLKENSEACEGC 435
>gb|KYP43166.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 412
Score = 72.4 bits (176), Expect(2) = 4e-18
Identities = 34/86 (39%), Positives = 52/86 (60%)
Frame = -1
Query: 376 VQAKRGVERIHEVLCVFDLDQNLLSVGQLAEHKYALHFEANCCTIFDKKEKKVILAKVEM 197
V+ K+G I +VL V +L +NLLS+GQ+ E Y LHF+ + C I+D K+ ++ K+E
Sbjct: 225 VETKKGTRLITDVLLVPNLKENLLSIGQMMEKGYTLHFKGDTCKIYDNKKLEIGRVKMEK 284
Query: 196 MNRCFPLEFKYAKDVAMMVSGGVSWL 119
NR FP+ + ++AM SWL
Sbjct: 285 RNRSFPISLRQGPNIAMKAEVDDSWL 310
Score = 46.6 bits (109), Expect(2) = 4e-18
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -2
Query: 117 WHKRLGHLNFGGLKLLHEKGMV*GLLFIYDKSEICEGC 4
WH+R GH N LKLL++K M+ L + + SE CEGC
Sbjct: 311 WHRRFGHFNIHALKLLYQKNMMRDLPCLKENSEACEGC 348
>gb|KYP53945.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 558
Score = 75.5 bits (184), Expect(2) = 5e-18
Identities = 36/90 (40%), Positives = 58/90 (64%)
Frame = -1
Query: 376 VQAKRGVERIHEVLCVFDLDQNLLSVGQLAEHKYALHFEANCCTIFDKKEKKVILAKVEM 197
V+ K+G+ I ++L V +L +NLLS+GQ+ E++Y L FE + C I+D K +V K+E
Sbjct: 272 VETKKGMRLIKDILLVPNLKENLLSIGQMMENRYFLLFERDICKIYDSKMLEVGQVKMEK 331
Query: 196 MNRCFPLEFKYAKDVAMMVSGGVSWLLAQK 107
NR FP+ FK+ ++A+ + SWL Q+
Sbjct: 332 RNRNFPISFKFGTNIAIKIEVDDSWLWHQR 361
Score = 43.1 bits (100), Expect(2) = 5e-18
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = -2
Query: 117 WHKRLGHLNFGGLKLLHEKGMV*GLLFIYDKSEICEG 7
WH+R GH N LK LH+KGM L + + +E CEG
Sbjct: 358 WHQRFGHFNIHALKHLHQKGMTRDLPSLKENNEACEG 394
>gb|KYP56111.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 271
Score = 69.7 bits (169), Expect(2) = 5e-18
Identities = 33/79 (41%), Positives = 50/79 (63%)
Frame = -1
Query: 376 VQAKRGVERIHEVLCVFDLDQNLLSVGQLAEHKYALHFEANCCTIFDKKEKKVILAKVEM 197
V+ K+G I ++L V +L +NLLS+GQ+ E+ Y+LHFE + C I+D K ++ K+E
Sbjct: 37 VETKKGTRLIKDMLLVPNLKENLLSIGQMMENGYSLHFERDICKIYDNKRLEIDQVKMEK 96
Query: 196 MNRCFPLEFKYAKDVAMMV 140
N FPL F ++AM V
Sbjct: 97 RNISFPLSFNRGTNIAMKV 115
Score = 48.9 bits (115), Expect(2) = 5e-18
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = -2
Query: 120 FWHKRLGHLNFGGLKLLHEKGMV*GLLFIYDKSEICEGC 4
FWH+R GH N LKLL++KGM+ L + + E CEGC
Sbjct: 122 FWHRRFGHFNIHALKLLYQKGMMRDLPSLKENIEACEGC 160
>gb|KYP52821.1| Copia protein [Cajanus cajan]
Length = 500
Score = 71.6 bits (174), Expect(2) = 1e-17
Identities = 34/86 (39%), Positives = 51/86 (59%)
Frame = -1
Query: 376 VQAKRGVERIHEVLCVFDLDQNLLSVGQLAEHKYALHFEANCCTIFDKKEKKVILAKVEM 197
V+ K+G I +VL V +L +NLLS+GQ+ E Y LHFE + C I+D K+ ++ K+E
Sbjct: 345 VETKKGTRLIADVLLVPNLKENLLSIGQMMEKGYTLHFEGDTCKIYDNKKLEIGRVKMEK 404
Query: 196 MNRCFPLEFKYAKDVAMMVSGGVSWL 119
NR FP+ + ++A SWL
Sbjct: 405 RNRSFPISLRQGPNIATKAEVDDSWL 430
Score = 45.8 bits (107), Expect(2) = 1e-17
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -2
Query: 117 WHKRLGHLNFGGLKLLHEKGMV*GLLFIYDKSEICEGC 4
WH+R GH N LKLL++K M+ L + + SE CEGC
Sbjct: 431 WHRRFGHFNTHALKLLYQKNMMRDLPCLKENSEACEGC 468
>gb|KYP41992.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 465
Score = 70.5 bits (171), Expect(2) = 1e-17
Identities = 34/86 (39%), Positives = 51/86 (59%)
Frame = -1
Query: 376 VQAKRGVERIHEVLCVFDLDQNLLSVGQLAEHKYALHFEANCCTIFDKKEKKVILAKVEM 197
V+ K+G I +VL V +L +NLLS+ Q+ E Y LHFE + C I+D K+ + K+E
Sbjct: 230 VETKKGTRLITDVLLVPNLKENLLSISQMMEKSYTLHFEGDTCKIYDNKKLENGRVKMEK 289
Query: 196 MNRCFPLEFKYAKDVAMMVSGGVSWL 119
NR FP+ + ++AM + SWL
Sbjct: 290 RNRSFPISMRQDPNIAMKIEVDDSWL 315
Score = 46.6 bits (109), Expect(2) = 1e-17
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = -2
Query: 117 WHKRLGHLNFGGLKLLHEKGMV*GLLFIYDKSEICEGC 4
WH+R GH N LKLL++K M+ L + + SE CEGC
Sbjct: 316 WHRRFGHFNMHALKLLYQKNMMRDLPCLKENSEACEGC 353