BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00065471
         (840 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]                   176   5e-58
gb|ANK58548.1| polyprotein [Fig badnavirus 1]                         160   3e-55
gb|ANK58542.1| polyprotein [Fig badnavirus 1]                         160   3e-55
gb|ANG56362.1| protease, partial [Fig badnavirus 1]                   160   3e-55
gb|ANG56359.1| protease, partial [Fig badnavirus 1]                   160   3e-55
gb|ANG56366.1| protease, partial [Fig badnavirus 1]                   159   4e-55
gb|ANG56365.1| protease, partial [Fig badnavirus 1]                   159   4e-55
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] >gi|333493962...   160   7e-55
gb|ANG56364.1| protease, partial [Fig badnavirus 1]                   160   8e-55
gb|ANK58539.1| polyprotein [Fig badnavirus 1]                         157   2e-54
gb|ANG56360.1| protease, partial [Fig badnavirus 1]                   158   2e-54
gb|ANG56363.1| protease, partial [Fig badnavirus 1]                   157   3e-54
gb|ANG56361.1| protease, partial [Fig badnavirus 1]                   156   4e-54
gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration...   155   1e-53
gb|ANG56358.1| protease, partial [Fig badnavirus 1]                   155   2e-53
gb|ANK58536.1| polyprotein [Fig badnavirus 1]                         152   5e-53
gb|ANK58545.1| polyprotein [Fig badnavirus 1]                         153   8e-53
ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discolor...   156   1e-52
ref|YP_009229919.1| polyprotein [Blackberry Virus F] >gi|6892539...   149   9e-48
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]               161   1e-46

>gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]
          Length = 1846

 Score =  176 bits (445), Expect(3) = 5e-58
 Identities = 88/177 (49%), Positives = 125/177 (70%), Gaps = 7/177 (3%)
 Frame = -2

Query: 752  KELQHDYQELGKRDQ---KSREKGKVILIEDEEAHVLFEQ----IKTAEEQQS*GQVGSR 594
            ++LQ DY+EL   D+   K R KG +I+ E E+A+ L E+    +   EEQ+       +
Sbjct: 1003 EDLQKDYKELLSEDEEKRKRRAKGVMIIEEGEQANFLQEEKVNKVAVQEEQRP-----KK 1057

Query: 593  LVKNMLYNIVINFEIPRVSRFSVRAILDTRATTCCIYENSTPNDAVEKNNFVVHFCGINS 414
            +V+NMLYN +I+ +IP + +FSV+AILDT ATTCCI + S P +A+E+N ++V F G+NS
Sbjct: 1058 MVRNMLYNFIISIDIPGIDKFSVKAILDTGATTCCIDQESIPKEALEENTYLVRFSGVNS 1117

Query: 413  KQTTEKKLKNGQMYI*ENIYRTPYTYSLQMQLRDGIQMILSCNFIKAMQGGVRIEGN 243
              T  KKLK G+M+I EN++R PYTYS  +++ DG+QMI+ CNFI+AM GGVRIEGN
Sbjct: 1118 TMTANKKLKGGRMFIGENMFRIPYTYSFPIKMEDGVQMIVGCNFIRAMYGGVRIEGN 1174



 Score = 76.3 bits (186), Expect(3) = 5e-58
 Identities = 36/80 (45%), Positives = 54/80 (67%)
 Frame = -3

Query: 241  VTFYKQLXXXXXXXXXXXXXAIEEMNLEKDEYIHIQEVVFYNARESRESFLEKFQPLLHR 62
            VTFYK L              ++E +++ +E   IQE V+ N  +SRESFL++F+ L+++
Sbjct: 1176 VTFYKNLTVINTSQSTEIARMLQE-DVDDEELWQIQEAVYINIGKSRESFLKRFEALINQ 1234

Query: 61   LKEAGFIGNNPLQHWQKNKI 2
            LKEAG+IG NPLQHW+KN++
Sbjct: 1235 LKEAGYIGENPLQHWEKNRV 1254



 Score = 23.1 bits (48), Expect(3) = 5e-58
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -1

Query: 822  EGEVERLTKDIEYYKQ 775
            E E+ERL K++ Y+K+
Sbjct: 975  EVEIERLEKEVSYWKK 990


>gb|ANK58548.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  160 bits (405), Expect(3) = 3e-55
 Identities = 91/176 (51%), Positives = 117/176 (66%), Gaps = 4/176 (2%)
 Frame = -2

Query: 758  LEKELQHDYQELGKRDQKSREKGKVILIEDEEAHVLFEQIKT----AEEQQS*GQVGSRL 591
            +EK L+ DY+EL K   K R KG +++ E EE + L E  K      EE++       + 
Sbjct: 1013 MEKSLRKDYEEL-KEGDKERRKG-IMIQEPEEVNYLGEDEKILAAGTEEKK-------KF 1063

Query: 590  VKNMLYNIVINFEIPRVSRFSVRAILDTRATTCCIYENSTPNDAVEKNNFVVHFCGINSK 411
            VKNMLYN  I FEIP VSRF VRAILDT A+TCCI E + P +A+E++ + V   G+NS 
Sbjct: 1064 VKNMLYNFDIEFEIPDVSRFRVRAILDTGASTCCINEGAVPKEALEESPYEVQLNGVNSV 1123

Query: 410  QTTEKKLKNGQMYI*ENIYRTPYTYSLQMQLRDGIQMILSCNFIKAMQGGVRIEGN 243
            Q T+KKLK G+M I  N +R P+TYSL + + D IQMI+ CNFI+AM GGVRIEGN
Sbjct: 1124 QKTKKKLKYGRMMIGMNTFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGN 1179



 Score = 82.0 bits (201), Expect(3) = 3e-55
 Identities = 43/80 (53%), Positives = 52/80 (65%)
 Frame = -3

Query: 241  VTFYKQLXXXXXXXXXXXXXAIEEMNLEKDEYIHIQEVVFYNARESRESFLEKFQPLLHR 62
            VTFYK L               EE+   ++EY+ +QE+V  N  ESRESFL+KF+PLL  
Sbjct: 1181 VTFYKNLTRISTSPEVSVNSLDEEVC--EEEYLQVQEMVICNIGESRESFLKKFRPLLEE 1238

Query: 61   LKEAGFIGNNPLQHWQKNKI 2
            LKEAGFIG NPLQHW+KN I
Sbjct: 1239 LKEAGFIGENPLQHWKKNGI 1258



 Score = 23.5 bits (49), Expect(3) = 3e-55
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -1

Query: 822  EGEVERLTKDIEYYK 778
            E E+ERL K++++YK
Sbjct: 991  EVEIERLNKEVKHYK 1005


>gb|ANK58542.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  160 bits (405), Expect(3) = 3e-55
 Identities = 91/176 (51%), Positives = 117/176 (66%), Gaps = 4/176 (2%)
 Frame = -2

Query: 758  LEKELQHDYQELGKRDQKSREKGKVILIEDEEAHVLFEQIKT----AEEQQS*GQVGSRL 591
            +EK L+ DY+EL K   K R KG +++ E EE + L E  K      EE++       + 
Sbjct: 1013 MEKSLRKDYEEL-KEGDKERRKG-IMIQEPEEVNYLGEDEKILAAGTEEKK-------KF 1063

Query: 590  VKNMLYNIVINFEIPRVSRFSVRAILDTRATTCCIYENSTPNDAVEKNNFVVHFCGINSK 411
            VKNMLYN  I FEIP VSRF VRAILDT A+TCCI E + P +A+E++ + V   G+NS 
Sbjct: 1064 VKNMLYNFDIEFEIPDVSRFRVRAILDTGASTCCINEGAVPKEALEESPYEVQLNGVNSV 1123

Query: 410  QTTEKKLKNGQMYI*ENIYRTPYTYSLQMQLRDGIQMILSCNFIKAMQGGVRIEGN 243
            Q T+KKLK G+M I  N +R P+TYSL + + D IQMI+ CNFI+AM GGVRIEGN
Sbjct: 1124 QKTKKKLKYGRMMIGMNTFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGN 1179



 Score = 82.0 bits (201), Expect(3) = 3e-55
 Identities = 43/80 (53%), Positives = 52/80 (65%)
 Frame = -3

Query: 241  VTFYKQLXXXXXXXXXXXXXAIEEMNLEKDEYIHIQEVVFYNARESRESFLEKFQPLLHR 62
            VTFYK L               EE+   ++EY+ +QE+V  N  ESRESFL+KF+PLL  
Sbjct: 1181 VTFYKNLTRISTSPEVSVNSLDEEVC--EEEYLQVQEMVICNIGESRESFLKKFRPLLEE 1238

Query: 61   LKEAGFIGNNPLQHWQKNKI 2
            LKEAGFIG NPLQHW+KN I
Sbjct: 1239 LKEAGFIGENPLQHWKKNGI 1258



 Score = 23.5 bits (49), Expect(3) = 3e-55
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -1

Query: 822  EGEVERLTKDIEYYK 778
            E E+ERL K++++YK
Sbjct: 991  EVEIERLNKEVKHYK 1005


>gb|ANG56362.1| protease, partial [Fig badnavirus 1]
          Length = 359

 Score =  160 bits (405), Expect(3) = 3e-55
 Identities = 91/176 (51%), Positives = 117/176 (66%), Gaps = 4/176 (2%)
 Frame = -2

Query: 758 LEKELQHDYQELGKRDQKSREKGKVILIEDEEAHVLFEQIKT----AEEQQS*GQVGSRL 591
           +EK L+ DY+EL K   K R KG +++ E EE + L E  K      EE++       + 
Sbjct: 70  MEKSLRKDYEEL-KEGDKERRKG-IMIQEPEEVNYLGEDEKILAAGTEEKK-------KF 120

Query: 590 VKNMLYNIVINFEIPRVSRFSVRAILDTRATTCCIYENSTPNDAVEKNNFVVHFCGINSK 411
           VKNMLYN  I FEIP VSRF VRAILDT A+TCCI E + P +A+E++ + V   G+NS 
Sbjct: 121 VKNMLYNFDIEFEIPDVSRFRVRAILDTGASTCCINEGAVPKEALEESPYEVQLNGVNSV 180

Query: 410 QTTEKKLKNGQMYI*ENIYRTPYTYSLQMQLRDGIQMILSCNFIKAMQGGVRIEGN 243
           Q T+KKLK G+M I  N +R P+TYSL + + D IQMI+ CNFI+AM GGVRIEGN
Sbjct: 181 QKTKKKLKYGRMMIGMNTFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGN 236



 Score = 82.0 bits (201), Expect(3) = 3e-55
 Identities = 43/80 (53%), Positives = 52/80 (65%)
 Frame = -3

Query: 241 VTFYKQLXXXXXXXXXXXXXAIEEMNLEKDEYIHIQEVVFYNARESRESFLEKFQPLLHR 62
           VTFYK L               EE+   ++EY+ +QE+V  N  ESRESFL+KF+PLL  
Sbjct: 238 VTFYKNLTRISTSPEVSVNSLDEEVC--EEEYLQVQEMVICNIGESRESFLKKFRPLLEE 295

Query: 61  LKEAGFIGNNPLQHWQKNKI 2
           LKEAGFIG NPLQHW+KN I
Sbjct: 296 LKEAGFIGENPLQHWKKNGI 315



 Score = 23.5 bits (49), Expect(3) = 3e-55
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -1

Query: 822 EGEVERLTKDIEYYK 778
           E E+ERL K++++YK
Sbjct: 48  EVEIERLNKEVKHYK 62


>gb|ANG56359.1| protease, partial [Fig badnavirus 1]
          Length = 359

 Score =  160 bits (405), Expect(3) = 3e-55
 Identities = 91/176 (51%), Positives = 118/176 (67%), Gaps = 4/176 (2%)
 Frame = -2

Query: 758 LEKELQHDYQELGKRDQKSREKGKVILIEDEEAHVLFEQIKT----AEEQQS*GQVGSRL 591
           +EK L+ DY+EL + D K R KG +++ E EE + L E  K      EE++       + 
Sbjct: 70  MEKSLRKDYEELREGD-KERRKG-ILIQEPEEVNYLGEDEKILAAGTEEKK-------KF 120

Query: 590 VKNMLYNIVINFEIPRVSRFSVRAILDTRATTCCIYENSTPNDAVEKNNFVVHFCGINSK 411
           VKNMLYN  I FEIP VSRF VRAILDT A+TCCI E + P +A+E++ + V   G+NS 
Sbjct: 121 VKNMLYNFDIEFEIPDVSRFRVRAILDTGASTCCINEGAVPKEALEESPYEVQLNGVNSV 180

Query: 410 QTTEKKLKNGQMYI*ENIYRTPYTYSLQMQLRDGIQMILSCNFIKAMQGGVRIEGN 243
           Q T+KKLK G+M I  N +R P+TYSL + + D IQMI+ CNFI+AM GGVRIEGN
Sbjct: 181 QKTKKKLKYGRMMIGMNTFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGN 236



 Score = 82.0 bits (201), Expect(3) = 3e-55
 Identities = 43/80 (53%), Positives = 52/80 (65%)
 Frame = -3

Query: 241 VTFYKQLXXXXXXXXXXXXXAIEEMNLEKDEYIHIQEVVFYNARESRESFLEKFQPLLHR 62
           VTFYK L               EE+   ++EY+ +QE+V  N  ESRESFL+KF+PLL  
Sbjct: 238 VTFYKNLTRISTSPEVSVNSLDEEVC--EEEYLQVQEMVICNIGESRESFLKKFRPLLEE 295

Query: 61  LKEAGFIGNNPLQHWQKNKI 2
           LKEAGFIG NPLQHW+KN I
Sbjct: 296 LKEAGFIGENPLQHWKKNGI 315



 Score = 23.5 bits (49), Expect(3) = 3e-55
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -1

Query: 822 EGEVERLTKDIEYYK 778
           E E+ERL K++++YK
Sbjct: 48  EVEIERLNKEVKHYK 62


>gb|ANG56366.1| protease, partial [Fig badnavirus 1]
          Length = 359

 Score =  159 bits (403), Expect(3) = 4e-55
 Identities = 91/176 (51%), Positives = 117/176 (66%), Gaps = 4/176 (2%)
 Frame = -2

Query: 758 LEKELQHDYQELGKRDQKSREKGKVILIEDEEAHVLFEQIKT----AEEQQS*GQVGSRL 591
           +EK L+ DY+EL K   K R KG +++ E EE + L E  K      EE++       + 
Sbjct: 70  MEKSLRKDYEEL-KDGDKERRKG-IMIQEPEEVNYLGEDEKILAAGTEEKK-------KF 120

Query: 590 VKNMLYNIVINFEIPRVSRFSVRAILDTRATTCCIYENSTPNDAVEKNNFVVHFCGINSK 411
           VKNMLYN  I FEIP VSRF VRAILDT A+TCCI E + P +A+E++ + V   G+NS 
Sbjct: 121 VKNMLYNFDIEFEIPDVSRFRVRAILDTGASTCCINEGAVPKEALEESPYEVQLNGVNSV 180

Query: 410 QTTEKKLKNGQMYI*ENIYRTPYTYSLQMQLRDGIQMILSCNFIKAMQGGVRIEGN 243
           Q T+KKLK G+M I  N +R P+TYSL + + D IQMI+ CNFI+AM GGVRIEGN
Sbjct: 181 QKTKKKLKYGRMMIGMNTFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGN 236



 Score = 82.0 bits (201), Expect(3) = 4e-55
 Identities = 43/80 (53%), Positives = 52/80 (65%)
 Frame = -3

Query: 241 VTFYKQLXXXXXXXXXXXXXAIEEMNLEKDEYIHIQEVVFYNARESRESFLEKFQPLLHR 62
           VTFYK L               EE+   ++EY+ +QE+V  N  ESRESFL+KF+PLL  
Sbjct: 238 VTFYKNLTRISTSPEVSVNSLDEEVC--EEEYLQVQEMVICNIGESRESFLKKFRPLLEE 295

Query: 61  LKEAGFIGNNPLQHWQKNKI 2
           LKEAGFIG NPLQHW+KN I
Sbjct: 296 LKEAGFIGENPLQHWKKNGI 315



 Score = 23.5 bits (49), Expect(3) = 4e-55
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -1

Query: 822 EGEVERLTKDIEYYK 778
           E E+ERL K++++YK
Sbjct: 48  EVEIERLNKEVKHYK 62


>gb|ANG56365.1| protease, partial [Fig badnavirus 1]
          Length = 359

 Score =  159 bits (403), Expect(3) = 4e-55
 Identities = 91/176 (51%), Positives = 117/176 (66%), Gaps = 4/176 (2%)
 Frame = -2

Query: 758 LEKELQHDYQELGKRDQKSREKGKVILIEDEEAHVLFEQIKT----AEEQQS*GQVGSRL 591
           +EK L+ DY+EL K   K R KG +++ E EE + L E  K      EE++       + 
Sbjct: 70  MEKSLRKDYEEL-KEGDKERRKG-IMIQEPEEVNYLGEDEKILAAGTEEKK-------KF 120

Query: 590 VKNMLYNIVINFEIPRVSRFSVRAILDTRATTCCIYENSTPNDAVEKNNFVVHFCGINSK 411
           VKNMLYN  I FEIP VSRF VRAILDT A+TCCI E + P +A+E++ + V   G+NS 
Sbjct: 121 VKNMLYNSDIEFEIPDVSRFRVRAILDTGASTCCINEGAVPKEALEESPYEVQLNGVNSV 180

Query: 410 QTTEKKLKNGQMYI*ENIYRTPYTYSLQMQLRDGIQMILSCNFIKAMQGGVRIEGN 243
           Q T+KKLK G+M I  N +R P+TYSL + + D IQMI+ CNFI+AM GGVRIEGN
Sbjct: 181 QKTKKKLKYGRMMIGMNTFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGN 236



 Score = 82.0 bits (201), Expect(3) = 4e-55
 Identities = 43/80 (53%), Positives = 52/80 (65%)
 Frame = -3

Query: 241 VTFYKQLXXXXXXXXXXXXXAIEEMNLEKDEYIHIQEVVFYNARESRESFLEKFQPLLHR 62
           VTFYK L               EE+   ++EY+ +QE+V  N  ESRESFL+KF+PLL  
Sbjct: 238 VTFYKNLTRISTSPEVSVNSLDEEVC--EEEYLQVQEMVICNIGESRESFLKKFRPLLEE 295

Query: 61  LKEAGFIGNNPLQHWQKNKI 2
           LKEAGFIG NPLQHW+KN I
Sbjct: 296 LKEAGFIGENPLQHWKKNGI 315



 Score = 23.5 bits (49), Expect(3) = 4e-55
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -1

Query: 822 EGEVERLTKDIEYYK 778
           E E+ERL K++++YK
Sbjct: 48  EVEIERLNKEVKHYK 62


>ref|YP_006273075.1| polyprotein [Fig badnavirus 1]
 gb|AEF56561.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  160 bits (405), Expect(3) = 7e-55
 Identities = 91/176 (51%), Positives = 117/176 (66%), Gaps = 4/176 (2%)
 Frame = -2

Query: 758  LEKELQHDYQELGKRDQKSREKGKVILIEDEEAHVLFEQIKT----AEEQQS*GQVGSRL 591
            +EK L+ DY+EL K   K R KG +++ E EE + L E  K      EE++       + 
Sbjct: 1013 MEKSLRKDYEEL-KEGDKERRKG-IMIQEPEEVNYLGEDEKILAAGTEEKK-------KF 1063

Query: 590  VKNMLYNIVINFEIPRVSRFSVRAILDTRATTCCIYENSTPNDAVEKNNFVVHFCGINSK 411
            VKNMLYN  I FEIP VSRF VRAILDT A+TCCI E + P +A+E++ + V   G+NS 
Sbjct: 1064 VKNMLYNFDIEFEIPDVSRFRVRAILDTGASTCCINEGAVPKEALEESPYEVQLNGVNSV 1123

Query: 410  QTTEKKLKNGQMYI*ENIYRTPYTYSLQMQLRDGIQMILSCNFIKAMQGGVRIEGN 243
            Q T+KKLK G+M I  N +R P+TYSL + + D IQMI+ CNFI+AM GGVRIEGN
Sbjct: 1124 QKTKKKLKYGRMMIGMNTFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGN 1179



 Score = 80.5 bits (197), Expect(3) = 7e-55
 Identities = 42/80 (52%), Positives = 52/80 (65%)
 Frame = -3

Query: 241  VTFYKQLXXXXXXXXXXXXXAIEEMNLEKDEYIHIQEVVFYNARESRESFLEKFQPLLHR 62
            VTFYK L               EE+   ++EY+ +QE+V  N  ESR+SFL+KF+PLL  
Sbjct: 1181 VTFYKNLTRISTSPEVSVNSLDEEVC--EEEYLQVQEMVICNIGESRKSFLKKFRPLLEE 1238

Query: 61   LKEAGFIGNNPLQHWQKNKI 2
            LKEAGFIG NPLQHW+KN I
Sbjct: 1239 LKEAGFIGENPLQHWKKNGI 1258



 Score = 23.5 bits (49), Expect(3) = 7e-55
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -1

Query: 822  EGEVERLTKDIEYYK 778
            E E+ERL K++++YK
Sbjct: 991  EVEIERLNKEVKHYK 1005


>gb|ANG56364.1| protease, partial [Fig badnavirus 1]
          Length = 359

 Score =  160 bits (405), Expect(3) = 8e-55
 Identities = 91/176 (51%), Positives = 117/176 (66%), Gaps = 4/176 (2%)
 Frame = -2

Query: 758 LEKELQHDYQELGKRDQKSREKGKVILIEDEEAHVLFEQIKT----AEEQQS*GQVGSRL 591
           +EK L+ DY+EL K   K R KG +++ E EE + L E  K      EE++       + 
Sbjct: 70  MEKSLRKDYEEL-KEGDKERRKG-IMIQEPEEVNYLGEDEKILAAGTEEKK-------KF 120

Query: 590 VKNMLYNIVINFEIPRVSRFSVRAILDTRATTCCIYENSTPNDAVEKNNFVVHFCGINSK 411
           VKNMLYN  I FEIP VSRF VRAILDT A+TCCI E + P +A+E++ + V   G+NS 
Sbjct: 121 VKNMLYNFDIEFEIPDVSRFRVRAILDTGASTCCINEGAVPKEALEESPYEVQLNGVNSV 180

Query: 410 QTTEKKLKNGQMYI*ENIYRTPYTYSLQMQLRDGIQMILSCNFIKAMQGGVRIEGN 243
           Q T+KKLK G+M I  N +R P+TYSL + + D IQMI+ CNFI+AM GGVRIEGN
Sbjct: 181 QKTKKKLKYGRMMIGMNTFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGN 236



 Score = 80.5 bits (197), Expect(3) = 8e-55
 Identities = 42/80 (52%), Positives = 52/80 (65%)
 Frame = -3

Query: 241 VTFYKQLXXXXXXXXXXXXXAIEEMNLEKDEYIHIQEVVFYNARESRESFLEKFQPLLHR 62
           VTFYK L               EE+   ++EY+ +QE+V  N  ESR+SFL+KF+PLL  
Sbjct: 238 VTFYKNLTRISTSPEVSVNSLDEEVC--EEEYLQVQEMVICNIGESRKSFLKKFRPLLEE 295

Query: 61  LKEAGFIGNNPLQHWQKNKI 2
           LKEAGFIG NPLQHW+KN I
Sbjct: 296 LKEAGFIGENPLQHWKKNGI 315



 Score = 23.5 bits (49), Expect(3) = 8e-55
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -1

Query: 822 EGEVERLTKDIEYYK 778
           E E+ERL K++++YK
Sbjct: 48  EVEIERLNKEVKHYK 62


>gb|ANK58539.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  157 bits (398), Expect(3) = 2e-54
 Identities = 90/176 (51%), Positives = 116/176 (65%), Gaps = 4/176 (2%)
 Frame = -2

Query: 758  LEKELQHDYQELGKRDQKSREKGKVILIEDEEAHVLFEQIKT----AEEQQS*GQVGSRL 591
            +EK L+ DY+EL K   K R KG +++ E EE + L E  K      EE++       + 
Sbjct: 1013 MEKSLRKDYEEL-KEGDKERRKG-ILIQEPEEVNYLGEDEKILAAGTEEKK-------KF 1063

Query: 590  VKNMLYNIVINFEIPRVSRFSVRAILDTRATTCCIYENSTPNDAVEKNNFVVHFCGINSK 411
            VKNMLYN  I  EIP VSRF VRAILDT A+TCCI E + P +A+E++ + V   G+NS 
Sbjct: 1064 VKNMLYNFDIESEIPDVSRFRVRAILDTGASTCCINEGAVPKEALEESPYEVQLNGVNSV 1123

Query: 410  QTTEKKLKNGQMYI*ENIYRTPYTYSLQMQLRDGIQMILSCNFIKAMQGGVRIEGN 243
            Q T+KKLK G+M I  N +R P+TYSL + + D IQMI+ CNFI+AM GGVRIEGN
Sbjct: 1124 QKTKKKLKYGRMMIGMNTFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGN 1179



 Score = 82.0 bits (201), Expect(3) = 2e-54
 Identities = 43/80 (53%), Positives = 52/80 (65%)
 Frame = -3

Query: 241  VTFYKQLXXXXXXXXXXXXXAIEEMNLEKDEYIHIQEVVFYNARESRESFLEKFQPLLHR 62
            VTFYK L               EE+   ++EY+ +QE+V  N  ESRESFL+KF+PLL  
Sbjct: 1181 VTFYKNLTRISTSPEVSVNSLDEEVC--EEEYLQVQEMVICNIGESRESFLKKFRPLLEE 1238

Query: 61   LKEAGFIGNNPLQHWQKNKI 2
            LKEAGFIG NPLQHW+KN I
Sbjct: 1239 LKEAGFIGENPLQHWKKNGI 1258



 Score = 23.5 bits (49), Expect(3) = 2e-54
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -1

Query: 822  EGEVERLTKDIEYYK 778
            E E+ERL K++++YK
Sbjct: 991  EVEIERLNKEVKHYK 1005


>gb|ANG56360.1| protease, partial [Fig badnavirus 1]
          Length = 359

 Score =  158 bits (400), Expect(3) = 2e-54
 Identities = 91/176 (51%), Positives = 117/176 (66%), Gaps = 4/176 (2%)
 Frame = -2

Query: 758 LEKELQHDYQELGKRDQKSREKGKVILIEDEEAHVLFEQIKT----AEEQQS*GQVGSRL 591
           +EK L+ DY+EL   D K R KG +++ E EE + L E  K      EE++       + 
Sbjct: 70  MEKSLRKDYEELIDGD-KERRKG-IMIQEPEEVNYLGEDEKILAAGTEEKK-------KF 120

Query: 590 VKNMLYNIVINFEIPRVSRFSVRAILDTRATTCCIYENSTPNDAVEKNNFVVHFCGINSK 411
           VKNMLYN  I FEIP VSRF VRAILDT A+TCCI E + P +A+E++ + V   G+NS 
Sbjct: 121 VKNMLYNFDIEFEIPDVSRFRVRAILDTGASTCCINEGAVPKEALEESPYEVQLNGVNSV 180

Query: 410 QTTEKKLKNGQMYI*ENIYRTPYTYSLQMQLRDGIQMILSCNFIKAMQGGVRIEGN 243
           Q T+KKLK G+M I  N +R P+TYSL + + D IQMI+ CNFI+AM GGVRIEGN
Sbjct: 181 QKTKKKLKYGRMMIGMNTFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGN 236



 Score = 82.0 bits (201), Expect(3) = 2e-54
 Identities = 43/80 (53%), Positives = 52/80 (65%)
 Frame = -3

Query: 241 VTFYKQLXXXXXXXXXXXXXAIEEMNLEKDEYIHIQEVVFYNARESRESFLEKFQPLLHR 62
           VTFYK L               EE+   ++EY+ +QE+V  N  ESRESFL+KF+PLL  
Sbjct: 238 VTFYKNLTRISTSPEVSVNSLDEEVC--EEEYLQVQEMVICNIGESRESFLKKFRPLLEE 295

Query: 61  LKEAGFIGNNPLQHWQKNKI 2
           LKEAGFIG NPLQHW+KN I
Sbjct: 296 LKEAGFIGENPLQHWKKNGI 315



 Score = 22.3 bits (46), Expect(3) = 2e-54
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 822 EGEVERLTKDIEYYK 778
           E E+ERL K++ +YK
Sbjct: 48  EVEIERLNKEVMHYK 62


>gb|ANG56363.1| protease, partial [Fig badnavirus 1]
          Length = 359

 Score =  157 bits (396), Expect(3) = 3e-54
 Identities = 90/176 (51%), Positives = 117/176 (66%), Gaps = 4/176 (2%)
 Frame = -2

Query: 758 LEKELQHDYQELGKRDQKSREKGKVILIEDEEAHVLFEQIKT----AEEQQS*GQVGSRL 591
           +E  L+ DY+EL + D K R KG +++ E EE + L E  K      EE++       + 
Sbjct: 70  METSLRKDYEELIEGD-KERRKG-IMIQEPEEVNYLGEDEKILAAGTEEKK-------KF 120

Query: 590 VKNMLYNIVINFEIPRVSRFSVRAILDTRATTCCIYENSTPNDAVEKNNFVVHFCGINSK 411
           VKNMLYN  I FEIP VSRF VRAILDT A+TCCI E + P +A+E++ + V   G+NS 
Sbjct: 121 VKNMLYNFDIEFEIPDVSRFRVRAILDTGASTCCINEGAVPKEALEESPYEVQLNGVNSV 180

Query: 410 QTTEKKLKNGQMYI*ENIYRTPYTYSLQMQLRDGIQMILSCNFIKAMQGGVRIEGN 243
           Q T+KKLK G+M I  N +R P+TYSL + + D IQMI+ CNFI+AM GGVRIEGN
Sbjct: 181 QKTKKKLKYGRMMIGMNTFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGN 236



 Score = 82.0 bits (201), Expect(3) = 3e-54
 Identities = 43/80 (53%), Positives = 52/80 (65%)
 Frame = -3

Query: 241 VTFYKQLXXXXXXXXXXXXXAIEEMNLEKDEYIHIQEVVFYNARESRESFLEKFQPLLHR 62
           VTFYK L               EE+   ++EY+ +QE+V  N  ESRESFL+KF+PLL  
Sbjct: 238 VTFYKNLTRISTSPEVSVNSLDEEVC--EEEYLQVQEMVICNIGESRESFLKKFRPLLEE 295

Query: 61  LKEAGFIGNNPLQHWQKNKI 2
           LKEAGFIG NPLQHW+KN I
Sbjct: 296 LKEAGFIGENPLQHWKKNGI 315



 Score = 23.5 bits (49), Expect(3) = 3e-54
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -1

Query: 822 EGEVERLTKDIEYYK 778
           E E+ERL K++++YK
Sbjct: 48  EVEIERLNKEVKHYK 62


>gb|ANG56361.1| protease, partial [Fig badnavirus 1]
          Length = 359

 Score =  156 bits (395), Expect(3) = 4e-54
 Identities = 90/176 (51%), Positives = 117/176 (66%), Gaps = 4/176 (2%)
 Frame = -2

Query: 758 LEKELQHDYQELGKRDQKSREKGKVILIEDEEAHVLFEQIKT----AEEQQS*GQVGSRL 591
           +EK L+ DY+EL + D K R KG +++ E EE + L E  K      EE++       + 
Sbjct: 70  MEKSLRKDYEELIEGD-KERRKG-ILIQEPEEVNYLGEDEKILAAGTEEKK-------KF 120

Query: 590 VKNMLYNIVINFEIPRVSRFSVRAILDTRATTCCIYENSTPNDAVEKNNFVVHFCGINSK 411
           VKNMLYN  I  EIP VSRF VRAILDT A+TCCI E + P +A+E++ + V   G+NS 
Sbjct: 121 VKNMLYNFDIESEIPDVSRFRVRAILDTGASTCCINEGAVPKEALEESPYEVQLNGVNSV 180

Query: 410 QTTEKKLKNGQMYI*ENIYRTPYTYSLQMQLRDGIQMILSCNFIKAMQGGVRIEGN 243
           Q T+KKLK G+M I  N +R P+TYSL + + D IQMI+ CNFI+AM GGVRIEGN
Sbjct: 181 QKTKKKLKYGRMMIGMNTFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGN 236



 Score = 82.0 bits (201), Expect(3) = 4e-54
 Identities = 43/80 (53%), Positives = 52/80 (65%)
 Frame = -3

Query: 241 VTFYKQLXXXXXXXXXXXXXAIEEMNLEKDEYIHIQEVVFYNARESRESFLEKFQPLLHR 62
           VTFYK L               EE+   ++EY+ +QE+V  N  ESRESFL+KF+PLL  
Sbjct: 238 VTFYKNLTRISTSPEVSVNSLDEEVC--EEEYLQVQEMVICNIGESRESFLKKFRPLLEE 295

Query: 61  LKEAGFIGNNPLQHWQKNKI 2
           LKEAGFIG NPLQHW+KN I
Sbjct: 296 LKEAGFIGENPLQHWKKNGI 315



 Score = 23.5 bits (49), Expect(3) = 4e-54
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -1

Query: 822 EGEVERLTKDIEYYK 778
           E E+ERL K++++YK
Sbjct: 48  EVEIERLNKEVKHYK 62


>gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
          Length = 1789

 Score =  155 bits (393), Expect(3) = 1e-53
 Identities = 89/176 (50%), Positives = 118/176 (67%), Gaps = 5/176 (2%)
 Frame = -2

Query: 755  EKELQHDYQELGKRDQKSREKGKVILIED-EEAHVLFEQIKT----AEEQQS*GQVGSRL 591
            EK L+ DY++L + D K   +GK I+I++ E+ + L E  K     AEE++       RL
Sbjct: 1029 EKALKKDYEDLKEGDIK---RGKGIMIQETEDINYLGENEKALIAGAEERK-------RL 1078

Query: 590  VKNMLYNIVINFEIPRVSRFSVRAILDTRATTCCIYENSTPNDAVEKNNFVVHFCGINSK 411
            VKNMLYN  I FEIP V +F VRAILDT A+TCC+ E + P +A+E + + V   G+NS 
Sbjct: 1079 VKNMLYNFDIEFEIPDVPKFKVRAILDTGASTCCVNEGAVPKEAIEDSPYEVQLNGVNSV 1138

Query: 410  QTTEKKLKNGQMYI*ENIYRTPYTYSLQMQLRDGIQMILSCNFIKAMQGGVRIEGN 243
            Q T+KKLK G+M I  N +R P+TYSL + + D IQMI+ CNFI+AM GGVRIEGN
Sbjct: 1139 QKTKKKLKYGRMMIGMNSFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGN 1194



 Score = 79.7 bits (195), Expect(3) = 1e-53
 Identities = 39/80 (48%), Positives = 52/80 (65%)
 Frame = -3

Query: 241  VTFYKQLXXXXXXXXXXXXXAIEEMNLEKDEYIHIQEVVFYNARESRESFLEKFQPLLHR 62
            VTFYK L              +EE  + ++EY+ +QE+V  N  ESRESFL++F+PL+  
Sbjct: 1196 VTFYKNLTRISTSPEVTVNS-LEEEEVCEEEYLQVQEMVICNIGESRESFLKRFKPLIEE 1254

Query: 61   LKEAGFIGNNPLQHWQKNKI 2
            LKEAG+IG NPLQHW KN +
Sbjct: 1255 LKEAGYIGENPLQHWSKNGV 1274



 Score = 24.6 bits (52), Expect(3) = 1e-53
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -1

Query: 822  EGEVERLTKDIEYYK 778
            E E+ERL K++++YK
Sbjct: 1006 EAEIERLNKEVKHYK 1020


>gb|ANG56358.1| protease, partial [Fig badnavirus 1]
          Length = 359

 Score =  155 bits (392), Expect(3) = 2e-53
 Identities = 90/176 (51%), Positives = 116/176 (65%), Gaps = 4/176 (2%)
 Frame = -2

Query: 758 LEKELQHDYQELGKRDQKSREKGKVILIEDEEAHVLFEQIKT----AEEQQS*GQVGSRL 591
           +EK L+ DY+EL   D K R KG +++ E EE + L E  K      EE++       + 
Sbjct: 70  MEKSLRKDYEELIDGD-KERRKG-IMIQEPEEVNYLGEDEKILAAGTEEKK-------KF 120

Query: 590 VKNMLYNIVINFEIPRVSRFSVRAILDTRATTCCIYENSTPNDAVEKNNFVVHFCGINSK 411
           VKNMLYN  I  EIP VSRF VRAILDT A+TCCI E + P +A+E++ + V   G+NS 
Sbjct: 121 VKNMLYNFDIESEIPDVSRFRVRAILDTGASTCCINEGAVPKEALEESPYEVQLNGVNSV 180

Query: 410 QTTEKKLKNGQMYI*ENIYRTPYTYSLQMQLRDGIQMILSCNFIKAMQGGVRIEGN 243
           Q T+KKLK G+M I  N +R P+TYSL + + D IQMI+ CNFI+AM GGVRIEGN
Sbjct: 181 QKTKKKLKYGRMMIGMNTFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGN 236



 Score = 82.0 bits (201), Expect(3) = 2e-53
 Identities = 43/80 (53%), Positives = 52/80 (65%)
 Frame = -3

Query: 241 VTFYKQLXXXXXXXXXXXXXAIEEMNLEKDEYIHIQEVVFYNARESRESFLEKFQPLLHR 62
           VTFYK L               EE+   ++EY+ +QE+V  N  ESRESFL+KF+PLL  
Sbjct: 238 VTFYKNLTRISTSPEVSVNSLDEEVC--EEEYLQVQEMVICNIGESRESFLKKFRPLLEE 295

Query: 61  LKEAGFIGNNPLQHWQKNKI 2
           LKEAGFIG NPLQHW+KN I
Sbjct: 296 LKEAGFIGENPLQHWKKNGI 315



 Score = 22.3 bits (46), Expect(3) = 2e-53
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 822 EGEVERLTKDIEYYK 778
           E E+ERL K++ +YK
Sbjct: 48  EVEIERLNKEVMHYK 62


>gb|ANK58536.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  152 bits (385), Expect(3) = 5e-53
 Identities = 89/176 (50%), Positives = 115/176 (65%), Gaps = 4/176 (2%)
 Frame = -2

Query: 758  LEKELQHDYQELGKRDQKSREKGKVILIEDEEAHVLFEQIKT----AEEQQS*GQVGSRL 591
            +E  L+ DY+EL   D K R KG +++ E EE + L E  K      EE++       + 
Sbjct: 1013 METSLRKDYEELIDGD-KERRKG-ILIQEPEEVNYLGEDEKILAAGTEEKK-------KF 1063

Query: 590  VKNMLYNIVINFEIPRVSRFSVRAILDTRATTCCIYENSTPNDAVEKNNFVVHFCGINSK 411
            VKNMLYN  I  EIP VSRF VRAILDT A+TCCI E + P +A+E++ + V   G+NS 
Sbjct: 1064 VKNMLYNSDIESEIPDVSRFRVRAILDTGASTCCINEGAVPKEALEESPYEVQLNGVNSV 1123

Query: 410  QTTEKKLKNGQMYI*ENIYRTPYTYSLQMQLRDGIQMILSCNFIKAMQGGVRIEGN 243
            Q T+KKLK G+M I  N +R P+TYSL + + D IQMI+ CNFI+AM GGVRIEGN
Sbjct: 1124 QKTKKKLKYGRMMIGMNTFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGN 1179



 Score = 82.0 bits (201), Expect(3) = 5e-53
 Identities = 43/80 (53%), Positives = 52/80 (65%)
 Frame = -3

Query: 241  VTFYKQLXXXXXXXXXXXXXAIEEMNLEKDEYIHIQEVVFYNARESRESFLEKFQPLLHR 62
            VTFYK L               EE+   ++EY+ +QE+V  N  ESRESFL+KF+PLL  
Sbjct: 1181 VTFYKNLTRISTSPEVSVNSLDEEVC--EEEYLQVQEMVICNIGESRESFLKKFRPLLEE 1238

Query: 61   LKEAGFIGNNPLQHWQKNKI 2
            LKEAGFIG NPLQHW+KN I
Sbjct: 1239 LKEAGFIGENPLQHWKKNGI 1258



 Score = 23.5 bits (49), Expect(3) = 5e-53
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -1

Query: 822  EGEVERLTKDIEYYK 778
            E E+ERL K++++YK
Sbjct: 991  EVEIERLNKEVKHYK 1005


>gb|ANK58545.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  153 bits (386), Expect(3) = 8e-53
 Identities = 89/176 (50%), Positives = 116/176 (65%), Gaps = 4/176 (2%)
 Frame = -2

Query: 758  LEKELQHDYQELGKRDQKSREKGKVILIEDEEAHVLFEQIKT----AEEQQS*GQVGSRL 591
            +E  L+ DY+EL + D K R KG +++ E EE + L E  K      EE++       + 
Sbjct: 1013 METSLRKDYEELIEGD-KERRKG-IMIQEPEEVNYLGEDEKILAAGTEEKK-------KF 1063

Query: 590  VKNMLYNIVINFEIPRVSRFSVRAILDTRATTCCIYENSTPNDAVEKNNFVVHFCGINSK 411
            VKNMLYN  I  EIP VSRF VRAILDT A+TCCI E + P +A+E++ + V   G+NS 
Sbjct: 1064 VKNMLYNSDIESEIPDVSRFRVRAILDTGASTCCINEGAVPKEALEESPYEVQLNGVNSV 1123

Query: 410  QTTEKKLKNGQMYI*ENIYRTPYTYSLQMQLRDGIQMILSCNFIKAMQGGVRIEGN 243
            Q T+KKLK G+M I  N +R P+TYSL + + D IQMI+ CNFI+AM GGVRIEGN
Sbjct: 1124 QKTKKKLKYGRMMIGMNTFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGN 1179



 Score = 82.0 bits (201), Expect(3) = 8e-53
 Identities = 43/80 (53%), Positives = 52/80 (65%)
 Frame = -3

Query: 241  VTFYKQLXXXXXXXXXXXXXAIEEMNLEKDEYIHIQEVVFYNARESRESFLEKFQPLLHR 62
            VTFYK L               EE+   ++EY+ +QE+V  N  ESRESFL+KF+PLL  
Sbjct: 1181 VTFYKNLTRISTSPEVSVNSLDEEVC--EEEYLQVQEMVICNIGESRESFLKKFRPLLEE 1238

Query: 61   LKEAGFIGNNPLQHWQKNKI 2
            LKEAGFIG NPLQHW+KN I
Sbjct: 1239 LKEAGFIGENPLQHWKKNGI 1258



 Score = 22.3 bits (46), Expect(3) = 8e-53
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 822  EGEVERLTKDIEYYK 778
            E E+ERL K++ +YK
Sbjct: 991  EVEIERLNKEVMHYK 1005


>ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
 emb|CDN68224.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
          Length = 1830

 Score =  156 bits (394), Expect(3) = 1e-52
 Identities = 90/175 (51%), Positives = 117/175 (66%), Gaps = 4/175 (2%)
 Frame = -2

Query: 755  EKELQHDYQELGKRDQKSREKGKVILIEDEEAHVLFEQIKT----AEEQQS*GQVGSRLV 588
            EK L+ DY++L + D K R KG V++ E E+ + L E  K     AEE++       RLV
Sbjct: 993  EKSLKKDYEDLREGDIK-RGKG-VMIQEPEDINYLGENEKVLIAGAEERK-------RLV 1043

Query: 587  KNMLYNIVINFEIPRVSRFSVRAILDTRATTCCIYENSTPNDAVEKNNFVVHFCGINSKQ 408
            KNMLYN  I FEIP V +F VRAILDT A+TCC+ E + P +A+E + + V   G+NS Q
Sbjct: 1044 KNMLYNFDIEFEIPDVPKFKVRAILDTGASTCCVNEGAVPKEAIEDSPYEVQLNGVNSVQ 1103

Query: 407  TTEKKLKNGQMYI*ENIYRTPYTYSLQMQLRDGIQMILSCNFIKAMQGGVRIEGN 243
             T+KKLK G+M I  N +R P+TYSL + + D IQMI+ CNFI+AM GGVRIEGN
Sbjct: 1104 KTKKKLKYGRMMIGMNSFRIPFTYSLPLVIGDNIQMIVGCNFIRAMYGGVRIEGN 1158



 Score = 75.9 bits (185), Expect(3) = 1e-52
 Identities = 38/80 (47%), Positives = 51/80 (63%)
 Frame = -3

Query: 241  VTFYKQLXXXXXXXXXXXXXAIEEMNLEKDEYIHIQEVVFYNARESRESFLEKFQPLLHR 62
            VTFYK L               EE+   ++EY+ IQ++V  N  ESRESFL+KF+PL+  
Sbjct: 1160 VTFYKNLTKISTSPEVSVNVLEEEVC--EEEYLQIQDMVVCNIGESRESFLKKFKPLIEE 1217

Query: 61   LKEAGFIGNNPLQHWQKNKI 2
             +EAG+IG NPLQHW+KN +
Sbjct: 1218 FQEAGYIGENPLQHWEKNGV 1237



 Score = 24.6 bits (52), Expect(3) = 1e-52
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -1

Query: 822  EGEVERLTKDIEYYK 778
            E E+ERL K++++YK
Sbjct: 970  EAEIERLNKEVKHYK 984


>ref|YP_009229919.1| polyprotein [Blackberry Virus F]
 gb|AHX37579.1| polyprotein [Blackberry Virus F]
          Length = 1948

 Score =  149 bits (377), Expect(2) = 9e-48
 Identities = 84/182 (46%), Positives = 110/182 (60%), Gaps = 9/182 (4%)
 Frame = -2

Query: 761  ELEKELQHDYQELGKRDQ-KSREKGKVILIEDEEAHVLFEQIKTAEEQQS*GQVGS---- 597
            +L ++L+    E  + DQ K R KG VI       H      +TA        + S    
Sbjct: 1064 KLIEDLEKGRMEAERFDQAKERRKGVVIRTPSGSVHEASSDEETAMAITEETSLSSTTEA 1123

Query: 596  ----RLVKNMLYNIVINFEIPRVSRFSVRAILDTRATTCCIYENSTPNDAVEKNNFVVHF 429
                R V N LYN+V+N  IP V  FSVRAILDT ATTCC+ + + P +A+EK+ + VHF
Sbjct: 1124 PSHGRKVINRLYNMVVNINIPGVKPFSVRAILDTGATTCCVDKGAVPAEALEKSPYAVHF 1183

Query: 428  CGINSKQTTEKKLKNGQMYI*ENIYRTPYTYSLQMQLRDGIQMILSCNFIKAMQGGVRIE 249
             GINS+Q  E K K GQM I EN +R P+TYS  M ++DGI+M+L CNFI++M GG+RIE
Sbjct: 1184 SGINSRQLAEYKFKQGQMEIGENRFRIPFTYSFPMGMKDGIEMLLGCNFIRSMYGGLRIE 1243

Query: 248  GN 243
            GN
Sbjct: 1244 GN 1245



 Score = 70.1 bits (170), Expect(2) = 9e-48
 Identities = 27/59 (45%), Positives = 43/59 (72%)
 Frame = -3

Query: 178  IEEMNLEKDEYIHIQEVVFYNARESRESFLEKFQPLLHRLKEAGFIGNNPLQHWQKNKI 2
            +EE+ LE +EY  I+E+V+Y+   +   F E+F+PLL RLKE G++G  P++HW KN++
Sbjct: 1269 VEELGLEAEEYYSIREMVYYSLGHTSPKFQERFKPLLERLKEQGYVGEEPMRHWSKNQV 1327


>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1967

 Score =  161 bits (407), Expect(2) = 1e-46
 Identities = 82/174 (47%), Positives = 117/174 (67%)
 Frame = -2

Query: 761  ELEKELQHDYQELGKRDQKSREKGKVILIEDEEAHVLFEQIKTAEEQQS*GQVGSRLVKN 582
            EL+ +L+   +EL   D + R K K ++I++   +   E+              +R VKN
Sbjct: 1112 ELQLQLEQSRKELAGADSR-RRKDKGVVIDEGSCYFNPEETTRIVAHGDTQVTKTRPVKN 1170

Query: 581  MLYNIVINFEIPRVSRFSVRAILDTRATTCCIYENSTPNDAVEKNNFVVHFCGINSKQTT 402
            MLYN+ +  EIP +  F+V+AILDT ATTCCI   S P DA+E+N+FVV+F GINSKQ  
Sbjct: 1171 MLYNMDVRMEIPGIPAFTVKAILDTGATTCCIDSRSVPKDALEENSFVVNFSGINSKQQV 1230

Query: 401  EKKLKNGQMYI*ENIYRTPYTYSLQMQLRDGIQMILSCNFIKAMQGGVRIEGNS 240
            ++K+K G+M+I E+ +R PY YS +MQ+ DGIQ+IL CNFI++M GGVR+EGN+
Sbjct: 1231 KQKIKAGKMFINEHYFRIPYCYSFEMQIGDGIQLILGCNFIRSMYGGVRLEGNT 1284



 Score = 55.1 bits (131), Expect(2) = 1e-46
 Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
 Frame = -3

Query: 244  TVTFYKQLXXXXXXXXXXXXXAIEEMNLEK---DEYIHIQEVVFYNARESRESFLEKFQP 74
            TVTFYKQ+               EE   E+   DE+  IQE+V Y+       F +KF  
Sbjct: 1284 TVTFYKQITSINTRLAAPLLKQDEEEKEEELNLDEHRLIQEMVAYSTERPFVHFQQKFAG 1343

Query: 73   LLHRLKEAGFIGNNPLQHWQKNKI 2
            L+  LK  G+IG  P+++W KNK+
Sbjct: 1344 LIQELKAQGYIGEEPMKYWAKNKV 1367