BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00065235
         (466 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP51543.1| Retrovirus-related Pol polyprotein from transposo...    58   9e-07
gb|KYP31378.1| Retrovirus-related Pol polyprotein from transposo...    55   8e-06

>gb|KYP51543.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 439

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/58 (50%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
 Frame = +2

Query: 287 SCDVCQLGLYYRVSFLPS*HSKGSSPFDKVHFDIWSPSFDPLKI-VLIMCYFFDDYPR 457
           SC+ CQLG + R SF PS H++  SPF  VH+DIW PS  P  +  L    F DDY R
Sbjct: 358 SCESCQLGKHSRSSFSPSVHNRALSPFALVHYDIWGPSRVPSTLGFLYFVTFIDDYSR 415


>gb|KYP31378.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 585

 Score = 55.1 bits (131), Expect = 8e-06
 Identities = 29/58 (50%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
 Frame = +2

Query: 287 SCDVCQLGLYYRVSFLPS*HSKGSSPFDKVHFDIWSPSFDPLKI-VLIMCYFFDDYPR 457
           SC+ CQLG + R SF PS H + SSPF  VH DIW PS  P  +       F DDY R
Sbjct: 491 SCESCQLGKHSRSSFSPSVHKQASSPFALVHSDIWGPSRVPSTLGFQYFVTFIDDYSR 548