BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00065026
         (476 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]                   143   1e-36
gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus]               139   4e-35
gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]               139   4e-35
gb|ACH86210.1| unknown [Citrus yellow mosaic virus]                   136   5e-35
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]               138   7e-35
emb|CEH19729.1| polyprotein, partial [Grapevine roditis leaf dis...   130   9e-35
emb|CEH19727.1| polyprotein, partial [Grapevine roditis leaf dis...   130   1e-34
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]               136   3e-34
gb|AER00544.1| ORF III [Citrus yellow mosaic virus]                   136   3e-34
gb|AER00538.1| ORF III [Citrus yellow mosaic virus]                   136   3e-34
gb|ASM61447.1| polyprotein, partial [Cacao swollen shoot virus] ...   129   4e-34
emb|CEH19731.1| polyprotein, partial [Grapevine roditis leaf dis...   128   5e-34
gb|ASM61448.1| polyprotein, partial [Cacao swollen shoot virus]       128   6e-34
gb|AOX12011.1| polyprotein, partial [Fig badnavirus 1]                125   7e-34
gb|AOI28218.1| polyprotein, partial [Fig badnavirus 1]                127   8e-34
gb|AOI28216.1| polyprotein, partial [Fig badnavirus 1] >gi|10614...   127   8e-34
ref|NP_569153.1| unknown [Citrus yellow mosaic virus] >gi|164169...   135   9e-34
gb|ATZ69486.1| ORF3 polyprotein [Cacao swollen shoot Ghana N virus]   134   2e-33
gb|ASM61457.1| polyprotein, partial [Cacao swollen shoot virus]       127   2e-33
gb|ASM61443.1| polyprotein, partial [Cacao swollen shoot virus]       127   2e-33

>gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]
          Length = 1846

 Score =  143 bits (361), Expect = 1e-36
 Identities = 79/137 (57%), Positives = 96/137 (70%), Gaps = 5/137 (3%)
 Frame = +2

Query: 35  PSVSERTLQMEP-KPSHEDQIRRYRQGQRRLFTAQR*IRRM----TENRYNQTLQQQVNP 199
           P  +  T +  P  P +EDQIR YR+GQRR F A++  RR+    T  R+NQTL+Q VNP
Sbjct: 10  PVATTVTAERHPGTPLYEDQIRDYRRGQRRRFVARQAARRIASRITGRRFNQTLEQVVNP 69

Query: 200 EDQLQLSLRDRINLVPVEILYRSRSDDESHRVYIHRSEEAISCVDG*QIDRNVIQAESYE 379
           E+ LQ S+++R NLVP E+LYRSR DD +HRVY HRSEEAI CVDG Q DR VIQ +SYE
Sbjct: 70  EESLQQSMQERANLVPAEVLYRSRRDDINHRVYSHRSEEAILCVDGQQQDRLVIQPDSYE 129

Query: 380 ELRRSNMQFISKGKVPV 430
            LRRS  QFI  G + V
Sbjct: 130 ALRRSGFQFIHLGIMQV 146


>gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1976

 Score =  139 bits (350), Expect = 4e-35
 Identities = 73/135 (54%), Positives = 93/135 (68%)
 Frame = +2

Query: 26  RLRPSVSERTLQMEPKPSHEDQIRRYRQGQRRLFTAQR*IRRMTENRYNQTLQQQVNPED 205
           +L P+ + R  + +  P ++DQIR YRQ QRR     R   ++    YNQTL+Q V+PE 
Sbjct: 12  QLPPATTSRVEERDNTPLYDDQIRDYRQWQRRRHNMGRRWNQLIGRPYNQTLEQVVDPEV 71

Query: 206 QLQLSLRDRINLVPVEILYRSRSDDESHRVYIHRSEEAISCVDG*QIDRNVIQAESYEEL 385
            LQLS+++R  LVP E+LYRSRSDD  H+VYIHRSEEAI CVDG Q+DR +IQ ES E+L
Sbjct: 72  ALQLSMQERARLVPAEVLYRSRSDDRHHQVYIHRSEEAILCVDGDQVDRLLIQPESAEQL 131

Query: 386 RRSNMQFISKGKVPV 430
            RS M FI+ G V V
Sbjct: 132 NRSGMSFINMGIVQV 146


>gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1979

 Score =  139 bits (350), Expect = 4e-35
 Identities = 73/135 (54%), Positives = 93/135 (68%)
 Frame = +2

Query: 26  RLRPSVSERTLQMEPKPSHEDQIRRYRQGQRRLFTAQR*IRRMTENRYNQTLQQQVNPED 205
           +L P+ + R  + +  P ++DQIR YRQ QRR     R   ++    YNQTL+Q V+PE 
Sbjct: 12  QLPPATTSRVEERDNTPLYDDQIRDYRQWQRRRHNMGRRWNQLIGRPYNQTLEQVVDPEV 71

Query: 206 QLQLSLRDRINLVPVEILYRSRSDDESHRVYIHRSEEAISCVDG*QIDRNVIQAESYEEL 385
            LQLS+++R  LVP E+LYRSRSDD  H+VYIHRSEEAI CVDG Q+DR +IQ ES E+L
Sbjct: 72  ALQLSMQERARLVPAEVLYRSRSDDRHHQVYIHRSEEAILCVDGDQVDRLLIQPESAEQL 131

Query: 386 RRSNMQFISKGKVPV 430
            RS M FI+ G V V
Sbjct: 132 NRSGMSFINMGIVQV 146


>gb|ACH86210.1| unknown [Citrus yellow mosaic virus]
          Length = 463

 Score =  136 bits (342), Expect = 5e-35
 Identities = 72/135 (53%), Positives = 91/135 (67%)
 Frame = +2

Query: 26  RLRPSVSERTLQMEPKPSHEDQIRRYRQGQRRLFTAQR*IRRMTENRYNQTLQQQVNPED 205
           +L P+ + R  +    P ++DQIR YRQ QRR     R   ++    YNQTL+Q V+PE 
Sbjct: 12  QLPPATTARVEERNNTPLYDDQIRDYRQWQRRRHNMGRRWNQLIGRPYNQTLEQVVDPEV 71

Query: 206 QLQLSLRDRINLVPVEILYRSRSDDESHRVYIHRSEEAISCVDG*QIDRNVIQAESYEEL 385
            LQLS+++R  LVP E+LYRSR+DD  H+VYIHRSEEAI CVDG Q+DR +IQ ES E+L
Sbjct: 72  ALQLSMQERARLVPAEVLYRSRNDDRHHQVYIHRSEEAILCVDGDQVDRLLIQPESAEQL 131

Query: 386 RRSNMQFISKGKVPV 430
            RS M FI  G V V
Sbjct: 132 NRSGMSFIHMGIVQV 146


>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1968

 Score =  138 bits (348), Expect = 7e-35
 Identities = 74/135 (54%), Positives = 91/135 (67%)
 Frame = +2

Query: 26  RLRPSVSERTLQMEPKPSHEDQIRRYRQGQRRLFTAQR*IRRMTENRYNQTLQQQVNPED 205
           RL P  + R  + +  P ++DQIR YRQ QRR     R   ++    YNQTL+Q V+PE 
Sbjct: 12  RLPPVTTSRVDERDNTPLYDDQIRDYRQWQRRRHNMGRRWNQLIGRPYNQTLEQVVDPEV 71

Query: 206 QLQLSLRDRINLVPVEILYRSRSDDESHRVYIHRSEEAISCVDG*QIDRNVIQAESYEEL 385
            LQLS+++R  LVP E+LYRSRSDD  H+VYIHRSEEAI CVDG Q+DR +IQ ES E+L
Sbjct: 72  ALQLSMQERARLVPAEVLYRSRSDDRHHQVYIHRSEEAILCVDGDQVDRLLIQPESAEQL 131

Query: 386 RRSNMQFISKGKVPV 430
            RS M FI  G V V
Sbjct: 132 NRSGMSFIHMGIVQV 146


>emb|CEH19729.1| polyprotein, partial [Grapevine roditis leaf
           discoloration-associated virus]
          Length = 234

 Score =  130 bits (327), Expect = 9e-35
 Identities = 71/146 (48%), Positives = 101/146 (69%), Gaps = 7/146 (4%)
 Frame = +2

Query: 14  KMTARLRPSVSER---TLQMEPKPSHEDQIRRYRQGQRRLFTAQR*IRR----MTENRYN 172
           + T +  P+VS R   ++    +P  EDQ+R YR+ QRR F A++ +RR    +   RYN
Sbjct: 5   RTTTQQLPAVSSRRSESIHNRDQPLFEDQVRDYRRNQRRRFVAEQALRRTVGRIRGRRYN 64

Query: 173 QTLQQQVNPEDQLQLSLRDRINLVPVEILYRSRSDDESHRVYIHRSEEAISCVDG*QIDR 352
           QTL+Q VNPE++L  S+++R NLVP E+LYR+R D+ +H+VY HRSEEA+ CV G Q DR
Sbjct: 65  QTLEQTVNPEEELSQSMQERANLVPAEVLYRTRRDNINHQVYNHRSEEAMLCV-GEQQDR 123

Query: 353 NVIQAESYEELRRSNMQFISKGKVPV 430
           + IQ +S++EL+RS MQFI  G + V
Sbjct: 124 SFIQPDSFQELQRSGMQFIHLGVLQV 149


>emb|CEH19727.1| polyprotein, partial [Grapevine roditis leaf
           discoloration-associated virus]
          Length = 236

 Score =  130 bits (326), Expect = 1e-34
 Identities = 70/146 (47%), Positives = 101/146 (69%), Gaps = 7/146 (4%)
 Frame = +2

Query: 14  KMTARLRPSVSER---TLQMEPKPSHEDQIRRYRQGQRRLFTAQR*IRR----MTENRYN 172
           + T +  P+VS R   ++    +P  EDQ+R YR+ QRR F A++ +RR    +   RYN
Sbjct: 7   RTTTQQLPAVSSRRPESIHNRDQPLFEDQVRDYRRNQRRRFVAEQALRRTIGRIRGRRYN 66

Query: 173 QTLQQQVNPEDQLQLSLRDRINLVPVEILYRSRSDDESHRVYIHRSEEAISCVDG*QIDR 352
           QTL+Q ++PE++L  S+++R NLVP E+LYR+R D+ +H+VY HRSEEA+ CV G Q DR
Sbjct: 67  QTLEQTIDPEEELSQSMQERANLVPAEVLYRTRRDNINHQVYNHRSEEAMLCV-GEQQDR 125

Query: 353 NVIQAESYEELRRSNMQFISKGKVPV 430
           N IQ +S++EL+RS MQFI  G + V
Sbjct: 126 NFIQPDSFQELQRSGMQFIHLGVLQV 151


>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1967

 Score =  136 bits (343), Expect = 3e-34
 Identities = 72/135 (53%), Positives = 91/135 (67%)
 Frame = +2

Query: 26  RLRPSVSERTLQMEPKPSHEDQIRRYRQGQRRLFTAQR*IRRMTENRYNQTLQQQVNPED 205
           +L P+ + R  +    P ++DQIR YRQ QRR     R   ++    YNQTL+Q V+PE 
Sbjct: 12  QLPPATTSRVEERNNTPLYDDQIRDYRQWQRRRHNMGRRWNQLMGRPYNQTLEQVVDPEV 71

Query: 206 QLQLSLRDRINLVPVEILYRSRSDDESHRVYIHRSEEAISCVDG*QIDRNVIQAESYEEL 385
            LQLS+++R  LVP E+LYRSR+DD  H+VYIHRSEEAI CVDG Q+DR +IQ ES E+L
Sbjct: 72  ALQLSMQERARLVPAEVLYRSRNDDRHHQVYIHRSEEAILCVDGDQVDRLLIQPESAEQL 131

Query: 386 RRSNMQFISKGKVPV 430
            RS M FI  G V V
Sbjct: 132 NRSGMSFIHMGIVQV 146


>gb|AER00544.1| ORF III [Citrus yellow mosaic virus]
          Length = 1976

 Score =  136 bits (343), Expect = 3e-34
 Identities = 72/135 (53%), Positives = 92/135 (68%)
 Frame = +2

Query: 26  RLRPSVSERTLQMEPKPSHEDQIRRYRQGQRRLFTAQR*IRRMTENRYNQTLQQQVNPED 205
           +L P+ + R  + +  P ++DQIR YRQ Q+R     R   ++    YNQTL+Q V+PE 
Sbjct: 12  QLPPATTSRVEERDNTPLYDDQIRDYRQWQQRRHNMGRRWNQLIGRPYNQTLEQVVDPEV 71

Query: 206 QLQLSLRDRINLVPVEILYRSRSDDESHRVYIHRSEEAISCVDG*QIDRNVIQAESYEEL 385
            LQLS+++R  LVP E+LYRSRSDD  H+VYIHRSEEAI CVDG Q+DR +IQ ES E+L
Sbjct: 72  ALQLSMQERARLVPAEVLYRSRSDDRHHQVYIHRSEEAILCVDGDQVDRLLIQPESAEQL 131

Query: 386 RRSNMQFISKGKVPV 430
            RS M FI  G V V
Sbjct: 132 NRSGMPFIHMGIVQV 146


>gb|AER00538.1| ORF III [Citrus yellow mosaic virus]
          Length = 1982

 Score =  136 bits (343), Expect = 3e-34
 Identities = 72/135 (53%), Positives = 92/135 (68%)
 Frame = +2

Query: 26  RLRPSVSERTLQMEPKPSHEDQIRRYRQGQRRLFTAQR*IRRMTENRYNQTLQQQVNPED 205
           +L P+ + R  + +  P ++DQIR YRQ Q+R     R   ++    YNQTL+Q V+PE 
Sbjct: 12  QLPPATTSRVEERDNTPLYDDQIRDYRQWQQRRHNMGRRWNQLIGRPYNQTLEQVVDPEV 71

Query: 206 QLQLSLRDRINLVPVEILYRSRSDDESHRVYIHRSEEAISCVDG*QIDRNVIQAESYEEL 385
            LQLS+++R  LVP E+LYRSRSDD  H+VYIHRSEEAI CVDG Q+DR +IQ ES E+L
Sbjct: 72  ALQLSMQERARLVPAEVLYRSRSDDRHHQVYIHRSEEAILCVDGDQVDRLLIQPESAEQL 131

Query: 386 RRSNMQFISKGKVPV 430
            RS M FI  G V V
Sbjct: 132 NRSGMPFIHMGIVQV 146


>gb|ASM61447.1| polyprotein, partial [Cacao swollen shoot virus]
 gb|ASM61450.1| polyprotein, partial [Cacao swollen shoot virus]
          Length = 241

 Score =  129 bits (323), Expect = 4e-34
 Identities = 67/137 (48%), Positives = 94/137 (68%), Gaps = 5/137 (3%)
 Frame = +2

Query: 35  PSVSERTLQMEPK-PSHEDQIRRYRQGQRRLFTAQR*IRR----MTENRYNQTLQQQVNP 199
           PSV+  T +   + P +EDQIR YR+ QRR+F  +R  RR    M  +RY +TL+Q+++P
Sbjct: 11  PSVTSTTSEQNREGPLYEDQIRDYRRSQRRIFNLRRNARRLRRSMMGSRYQETLEQEIDP 70

Query: 200 EDQLQLSLRDRINLVPVEILYRSRSDDESHRVYIHRSEEAISCVDG*QIDRNVIQAESYE 379
           +  L+LS+++R  LVP E+LYRSR D   HRVY HRSEE++ CVDG Q+DR  IQ ES E
Sbjct: 71  QTTLRLSMQERARLVPAEVLYRSRRDTVHHRVYTHRSEESVLCVDGNQVDRAFIQPESLE 130

Query: 380 ELRRSNMQFISKGKVPV 430
           +L+++ M FI  G + V
Sbjct: 131 QLQKTGMSFIHIGILQV 147


>emb|CEH19731.1| polyprotein, partial [Grapevine roditis leaf
           discoloration-associated virus]
          Length = 235

 Score =  128 bits (322), Expect = 5e-34
 Identities = 69/139 (49%), Positives = 98/139 (70%), Gaps = 7/139 (5%)
 Frame = +2

Query: 35  PSVSER---TLQMEPKPSHEDQIRRYRQGQRRLFTAQR*IRR----MTENRYNQTLQQQV 193
           P+VS R   ++    +P  EDQ+R YR+ QRR F A++ +RR    +   RYNQTL+Q +
Sbjct: 14  PAVSSRRAESIHNRDQPLFEDQVRDYRRNQRRRFVAEQALRRTIGKIRGRRYNQTLEQTI 73

Query: 194 NPEDQLQLSLRDRINLVPVEILYRSRSDDESHRVYIHRSEEAISCVDG*QIDRNVIQAES 373
           +PE++L  S+++R NLVP E+LYR+R D+ +H+VY HRSEEA+ CV G Q DR+ IQ +S
Sbjct: 74  DPEEELSQSMQERANLVPAEVLYRTRRDNINHQVYNHRSEEAMLCV-GEQQDRSFIQPDS 132

Query: 374 YEELRRSNMQFISKGKVPV 430
           ++ELRRS MQFI  G + V
Sbjct: 133 FQELRRSGMQFIHLGVLQV 151


>gb|ASM61448.1| polyprotein, partial [Cacao swollen shoot virus]
          Length = 241

 Score =  128 bits (322), Expect = 6e-34
 Identities = 68/137 (49%), Positives = 93/137 (67%), Gaps = 5/137 (3%)
 Frame = +2

Query: 35  PSVSERTL-QMEPKPSHEDQIRRYRQGQRRLFTAQR*IRR----MTENRYNQTLQQQVNP 199
           PSV+  T  Q   +P +EDQIR YR+ QRR+F  +R  RR    M  +RY +TL+Q+++P
Sbjct: 11  PSVTSTTSEQNRERPLYEDQIRDYRRSQRRIFNLRRNARRLRRSMMGSRYQETLEQEIDP 70

Query: 200 EDQLQLSLRDRINLVPVEILYRSRSDDESHRVYIHRSEEAISCVDG*QIDRNVIQAESYE 379
           +  L+LS+++R  LVP E+LYRSR D   HRVY HRSEE++ CV G Q+DR  IQ ES E
Sbjct: 71  QTTLRLSMQERARLVPAEVLYRSRRDTVHHRVYTHRSEESVLCVGGNQVDRAFIQPESLE 130

Query: 380 ELRRSNMQFISKGKVPV 430
           +L+R+ M FI  G + V
Sbjct: 131 QLQRTGMSFIHIGILQV 147


>gb|AOX12011.1| polyprotein, partial [Fig badnavirus 1]
          Length = 158

 Score =  125 bits (315), Expect = 7e-34
 Identities = 69/126 (54%), Positives = 89/126 (70%), Gaps = 4/126 (3%)
 Frame = +2

Query: 71  KPSHEDQIRRYRQGQRRLFTAQR*IRR----MTENRYNQTLQQQVNPEDQLQLSLRDRIN 238
           +P  EDQIR YR+ QRR F A++ +RR    M   RYNQTL+Q V+PE +L  S+++R N
Sbjct: 11  QPLFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYNQTLEQIVDPEVELNQSMQERAN 70

Query: 239 LVPVEILYRSRSDDESHRVYIHRSEEAISCVDG*QIDRNVIQAESYEELRRSNMQFISKG 418
           LVP E+LYRSR D+ +H+VY HRSEEA+ CV G Q DR  IQ  S++EL+RS MQFI  G
Sbjct: 71  LVPAEVLYRSRRDNINHQVYNHRSEEAMLCV-GEQQDRMFIQPNSFQELQRSGMQFIHLG 129

Query: 419 KVPVTP 436
            + V P
Sbjct: 130 VLQVRP 135


>gb|AOI28218.1| polyprotein, partial [Fig badnavirus 1]
          Length = 196

 Score =  127 bits (318), Expect = 8e-34
 Identities = 73/138 (52%), Positives = 95/138 (68%), Gaps = 6/138 (4%)
 Frame = +2

Query: 35  PSVSERTLQM--EPKPSHEDQIRRYRQGQRRLFTAQR*IRR----MTENRYNQTLQQQVN 196
           P+VS R  +     +P  EDQIR YR+ QRR F A++ +RR    M   RYNQTL+Q V+
Sbjct: 12  PAVSTRRREEINRDQPLFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYNQTLEQIVD 71

Query: 197 PEDQLQLSLRDRINLVPVEILYRSRSDDESHRVYIHRSEEAISCVDG*QIDRNVIQAESY 376
           PE +L LS+++R NLVP E+LYRSR D+ +H+VY HRSEEA+ CV G Q DR  IQ  S+
Sbjct: 72  PEVELNLSMQERANLVPAEVLYRSRRDNINHQVYNHRSEEAMLCV-GEQQDRMFIQPNSF 130

Query: 377 EELRRSNMQFISKGKVPV 430
           +EL+RS MQFI  G + V
Sbjct: 131 QELQRSGMQFIHLGVLQV 148


>gb|AOI28216.1| polyprotein, partial [Fig badnavirus 1]
 gb|AOI28222.1| polyprotein, partial [Fig badnavirus 1]
          Length = 196

 Score =  127 bits (318), Expect = 8e-34
 Identities = 73/138 (52%), Positives = 95/138 (68%), Gaps = 6/138 (4%)
 Frame = +2

Query: 35  PSVSERTLQM--EPKPSHEDQIRRYRQGQRRLFTAQR*IRR----MTENRYNQTLQQQVN 196
           P+VS R  +     +P  EDQIR YR+ QRR F A++ +RR    M   RYNQTL+Q V+
Sbjct: 12  PAVSTRRREEINRDQPLFEDQIRDYRRNQRRRFVAEQAVRRTMGRMRGRRYNQTLEQIVD 71

Query: 197 PEDQLQLSLRDRINLVPVEILYRSRSDDESHRVYIHRSEEAISCVDG*QIDRNVIQAESY 376
           PE +L LS+++R NLVP E+LYRSR D+ +H+VY HRSEEA+ CV G Q DR  IQ  S+
Sbjct: 72  PEVELNLSMQERANLVPAEVLYRSRRDNINHQVYNHRSEEAMLCV-GEQQDRMFIQPNSF 130

Query: 377 EELRRSNMQFISKGKVPV 430
           +EL+RS MQFI  G + V
Sbjct: 131 QELQRSGMQFIHLGVLQV 148


>ref|NP_569153.1| unknown [Citrus yellow mosaic virus]
 gb|AAL18495.1|AF347695_3 unknown [Citrus yellow mosaic virus]
          Length = 1983

 Score =  135 bits (340), Expect = 9e-34
 Identities = 71/135 (52%), Positives = 92/135 (68%)
 Frame = +2

Query: 26  RLRPSVSERTLQMEPKPSHEDQIRRYRQGQRRLFTAQR*IRRMTENRYNQTLQQQVNPED 205
           +L P+ + R  + +  P ++DQIR YRQ QRR     R   ++    YNQTL+Q V+PE 
Sbjct: 12  QLPPATTARVEERDNTPLYDDQIRDYRQWQRRRHNMGRRWNQLIGRPYNQTLEQVVDPEV 71

Query: 206 QLQLSLRDRINLVPVEILYRSRSDDESHRVYIHRSEEAISCVDG*QIDRNVIQAESYEEL 385
            LQLS+++R  LVP E+LYRSR+DD  H+VYIH+SEEAI CVDG Q+DR +IQ ES E+L
Sbjct: 72  ALQLSMQERARLVPAEVLYRSRTDDRHHQVYIHKSEEAILCVDGDQVDRLLIQPESAEQL 131

Query: 386 RRSNMQFISKGKVPV 430
            RS M FI  G V V
Sbjct: 132 SRSGMSFIHMGIVQV 146


>gb|ATZ69486.1| ORF3 polyprotein [Cacao swollen shoot Ghana N virus]
          Length = 1881

 Score =  134 bits (338), Expect = 2e-33
 Identities = 75/142 (52%), Positives = 93/142 (65%), Gaps = 5/142 (3%)
 Frame = +2

Query: 20  TARLRPSVSE-RTLQMEPKPSHEDQIRRYRQGQRRLFTAQR*IRRM----TENRYNQTLQ 184
           T +  PSV++ R  Q +  P  EDQ+R YRQ QRRLF  QR  RR+    T  RY  TL+
Sbjct: 6   TVQENPSVTDGRGRQRDNTPLFEDQVRDYRQNQRRLFNLQRATRRLRGSVTGRRYQDTLE 65

Query: 185 QQVNPEDQLQLSLRDRINLVPVEILYRSRSDDESHRVYIHRSEEAISCVDG*QIDRNVIQ 364
           Q+V+P+  L+LS+++R  LVP E+LYRSR D   HRVY HRSEE+I C DG QIDR  IQ
Sbjct: 66  QEVDPQAALRLSMQERARLVPAEVLYRSRRDTVHHRVYTHRSEESILCTDGNQIDRTFIQ 125

Query: 365 AESYEELRRSNMQFISKGKVPV 430
            ES E L+RS M FI  G + V
Sbjct: 126 PESLERLQRSGMAFIHIGILQV 147


>gb|ASM61457.1| polyprotein, partial [Cacao swollen shoot virus]
          Length = 241

 Score =  127 bits (319), Expect = 2e-33
 Identities = 67/137 (48%), Positives = 93/137 (67%), Gaps = 5/137 (3%)
 Frame = +2

Query: 35  PSVSERTLQMEPK-PSHEDQIRRYRQGQRRLFTAQR*IRR----MTENRYNQTLQQQVNP 199
           PSV+  T +   + P +EDQIR YR+ QRR+F  +R  RR    M  +RY +TL+Q+++P
Sbjct: 11  PSVTSTTSEQNREGPLYEDQIRDYRRSQRRIFNLRRNARRLRRSMMGSRYRETLEQEIDP 70

Query: 200 EDQLQLSLRDRINLVPVEILYRSRSDDESHRVYIHRSEEAISCVDG*QIDRNVIQAESYE 379
           +  L+LS+++R  LVP E+LYRSR D   HRVY HRSEE++ CV G Q+DR  IQ ES E
Sbjct: 71  QTTLRLSMQERARLVPAEVLYRSRRDTVHHRVYTHRSEESVLCVGGNQVDRAFIQPESLE 130

Query: 380 ELRRSNMQFISKGKVPV 430
           +L+R+ M FI  G + V
Sbjct: 131 QLQRTGMSFIHIGILQV 147


>gb|ASM61443.1| polyprotein, partial [Cacao swollen shoot virus]
          Length = 241

 Score =  127 bits (319), Expect = 2e-33
 Identities = 67/137 (48%), Positives = 93/137 (67%), Gaps = 5/137 (3%)
 Frame = +2

Query: 35  PSVSERTLQMEPK-PSHEDQIRRYRQGQRRLFTAQR*IRR----MTENRYNQTLQQQVNP 199
           PSV+  T +   + P +EDQIR YR+ QRR+F  +R  RR    M  +RY +TL+Q+++P
Sbjct: 11  PSVTSTTSEQNREGPLYEDQIRDYRRSQRRIFNLRRNARRLRRSMKGSRYQETLEQEIDP 70

Query: 200 EDQLQLSLRDRINLVPVEILYRSRSDDESHRVYIHRSEEAISCVDG*QIDRNVIQAESYE 379
           +  L+LS+++R  LVP E+LYRSR D   HRVY HRSEE++ CV G Q+DR  IQ ES E
Sbjct: 71  QTTLRLSMQERARLVPAEVLYRSRRDTVHHRVYTHRSEESVLCVGGNQVDRAFIQPESLE 130

Query: 380 ELRRSNMQFISKGKVPV 430
           +L+R+ M FI  G + V
Sbjct: 131 QLQRTGMSFIHIGILQV 147