BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00064293
         (594 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera]    43   9e-08
gb|PNX92788.1| retrovirus-related Pol polyprotein from transposo...    43   2e-06

>emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera]
          Length = 1493

 Score = 43.1 bits (100), Expect(3) = 9e-08
 Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
 Frame = +3

Query: 3   NGSFIPLLDVSFIFLTSTITFHDVLYVLHFSINL-SVYACTKACNSIVIVTLSHCLFSDL 179
           +G+  P+     I ++ +IT + VL+V + S NL S+   TK  N       SHC+F DL
Sbjct: 447 DGTLSPVAGKGSIRISESITLNPVLHVPNLSCNLLSISQLTKKSNCSAKFLSSHCVFQDL 506

Query: 180 KTKRMTGRGHRYGDIHIFDTSCLLPH*AYTSISFNTY-------*WYYRLGY 314
            + +  G       ++ FD + +L   + T  +  +Y        W+ R+G+
Sbjct: 507 SSGKTIGSAKEREGLYYFDETDVLGQSSPTVCNSTSYSKDSELLLWHKRMGH 558



 Score = 32.3 bits (72), Expect(3) = 9e-08
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +1

Query: 445 KSNDKSLSYFQLVHFDI*GMSFVFDKDGD*HFSTFSNDYSKMCWCLLL 588
           KS  K    F L+H D+ G S   ++     F TF +D++++CW  LL
Sbjct: 597 KSKYKPSIPFTLIHSDLWGPSRTPNRTHKKWFITFIDDHTRLCWVYLL 644



 Score = 27.7 bits (60), Expect(3) = 9e-08
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 392 FNCDVYQFGKHHRTLFQSSQ 451
           F C+V +  KHHRT F  S+
Sbjct: 580 FQCEVCELAKHHRTSFPKSK 599


>gb|PNX92788.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 1503

 Score = 43.1 bits (100), Expect(3) = 2e-06
 Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 11/115 (9%)
 Frame = +3

Query: 3   NGSFIPLLDVSFIFLTSTITFHDVLYVLHFSINL-SVYACTKACNSIVIVTLSHCLFSDL 179
           NG+  P++    + L  T+    VL V     NL SV   T A   +VI    +C+F D+
Sbjct: 396 NGTSAPVIGKGSLPLNDTLNLDSVLVVPTLDYNLLSVSQITTALFCVVIFWPEYCVFKDI 455

Query: 180 KTKRMTGRGHRYGDIHIFDTSCLLPH*AYTSISFNTY----------*WYYRLGY 314
           +T++  G G R G ++  D           +++ N+Y           W+ RLG+
Sbjct: 456 QTRKTIGCGTRRGALYYLDLESKSSDKLRQALTINSYEGSKKKSNIWLWHRRLGH 510



 Score = 32.7 bits (73), Expect(3) = 2e-06
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +1

Query: 454 DKSLSYFQLVHFDI*GMSFVFDKDGD*HFSTFSNDYSKMCWCLLLKN 594
           +KS   F ++H D+ G S V    G   F TF +D ++M W  L+K+
Sbjct: 552 NKSPIPFMVIHSDVWGPSKVSSLGGSRWFVTFIDDCTRMTWVCLMKS 598



 Score = 22.3 bits (46), Expect(3) = 2e-06
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 392 FNCDVYQFGKHHRTLF 439
           F CDV +  K HR  F
Sbjct: 532 FQCDVCELAKSHRASF 547