BLASTX nr result

ID: Cheilocostus21_contig00064160 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00064160
         (559 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75744.1| hypothetical protein VITISV_040125 [Vitis vinifera]    52   7e-06
emb|CAN61179.1| hypothetical protein VITISV_032292 [Vitis vinifera]    51   8e-06

>emb|CAN75744.1| hypothetical protein VITISV_040125 [Vitis vinifera]
          Length = 1257

 Score = 52.4 bits (124), Expect(2) = 7e-06
 Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
 Frame = -1

Query: 445 FCHSKIYGRLCYAH*LVLDPR*DKLSHHSV*CTFLCHFQTQKGNQNLDMWAHRSYISAEI 266
           F   +++G  C+ H  +L P  DKLS  ++ C FL + + QKG +   +  HR +ISA++
Sbjct: 657 FLPPRVFGCTCFVH--ILTPGQDKLSAKAMKCLFLGYSRLQKGYRCYSLETHRYFISADV 714

Query: 265 TFLN---LLTTTTSYRI*PLHVPLLVPISVTTHAPSIPRVPHVTRHYYALTHLTTHP 104
           TF       +TT+      L V  ++PIS+ +   ++P  P    H   L  L +HP
Sbjct: 715 TFFEDSPFFSTTSE----SLPVSEVLPISIVSPPDAMPPRPLQVYHRRPLEAL-SHP 766



 Score = 25.0 bits (53), Expect(2) = 7e-06
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -2

Query: 558 HTHVPKSF*SDIVPLIYHLVNTVPLPLYTKLYPNYSLF 445
           H HVP  F  D V    +L+N +P  +     P+  LF
Sbjct: 613 HXHVPFRFWGDAVLTACYLINRMPSSVLHDQJPHSLLF 650


>emb|CAN61179.1| hypothetical protein VITISV_032292 [Vitis vinifera]
          Length = 1237

 Score = 51.2 bits (121), Expect(2) = 8e-06
 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
 Frame = -1

Query: 445 FCHSKIYGRLCYAH*LVLDPR*DKLSHHSV*CTFLCHFQTQKGNQNLDMWAHRSYISAEI 266
           F   +++G  C+ H  +L P  DKLS  ++ C FL + + QKG +   +  HR +ISA++
Sbjct: 657 FLPLRVFGCTCFVH--ILTPGQDKLSAKAMKCLFLGYSRLQKGYRCYSLETHRYFISADV 714

Query: 265 TFLN---LLTTTTSYRI*PLHVPLLVPISVTTHAPSIPRVPHVTRHYYALTHLTTHPFL 98
           TF       +TT+      L V  ++PI + +   ++P  P   + Y+    ++TH  L
Sbjct: 715 TFFEDSPFFSTTSE----SLPVSKVLPILIVSPPDAMP--PRPLQVYHRRPRVSTHETL 767



 Score = 25.8 bits (55), Expect(2) = 8e-06
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -2

Query: 558 HTHVPKSF*SDIVPLIYHLVNTVPLPLYTKLYPNYSLF 445
           H HVP  F  D V    +L+N +P  +     P+  LF
Sbjct: 613 HNHVPFRFWGDAVLTACYLINRMPSSILHDQIPHSLLF 650


Top