BLASTX nr result
ID: Cheilocostus21_contig00064072
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00064072
(461 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_002117531.1| ORF3 [Cycad leaf necrosis virus] >gi|1943991... 156 3e-41
gb|ANK58542.1| polyprotein [Fig badnavirus 1] 154 1e-40
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] >gi|333493962... 154 1e-40
gb|AND76971.1| polyprotein, partial [Fig badnavirus 1] >gi|10269... 149 2e-40
gb|ATZ69477.1| ORF3 polyprotein [Cacao swollen shoot Ghana L virus] 154 3e-40
gb|ANV20887.1| ORF3 protein [Dioscorea bacilliform RT virus] 153 3e-40
gb|ANV20893.1| ORF3 protein [Dioscorea bacilliform RT virus] 153 3e-40
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus] 153 5e-40
gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus] 153 5e-40
gb|ATV81254.1| polyprotein [Grapevine badnavirus 1] 152 9e-40
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus] 152 9e-40
gb|ACH86211.1| unknown [Citrus yellow mosaic virus] 152 1e-39
gb|ANK58539.1| polyprotein [Fig badnavirus 1] 152 1e-39
gb|AER00538.1| ORF III [Citrus yellow mosaic virus] 152 1e-39
ref|NP_569153.1| unknown [Citrus yellow mosaic virus] >gi|164169... 152 1e-39
gb|ANV20890.1| ORF3 protein [Dioscorea bacilliform RT virus] 151 2e-39
gb|AND76973.1| polyprotein, partial [Fig badnavirus 1] 146 2e-39
gb|AND76972.1| polyprotein, partial [Fig badnavirus 1] 146 2e-39
ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]... 150 3e-39
gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus] 150 3e-39
>ref|YP_002117531.1| ORF3 [Cycad leaf necrosis virus]
gb|ACF60613.1| ORF3 [Cycad leaf necrosis virus]
Length = 1916
Score = 156 bits (395), Expect = 3e-41
Identities = 69/105 (65%), Positives = 85/105 (80%)
Frame = -1
Query: 449 LLNYSCNYIPNFGKLLSPLYAKTNPTGEKRLNQ*DWALVKQIKEQVQRLLDLEIPLENCC 270
+LNY+ +YIPN GK L PLY+K +PTGEKR+N DWALVK++K+ VQ L D+E+P + CC
Sbjct: 1591 ILNYARSYIPNLGKTLGPLYSKVSPTGEKRMNHQDWALVKKVKDSVQNLPDMELPPKQCC 1650
Query: 269 IVLDTDECMDGWGGVCKWKLHRYDPITLEKVCAYASGKFTLPKST 135
IV++TD CMDGWGGVCKWKL R+D T EK CAYASGKF+ KST
Sbjct: 1651 IVIETDGCMDGWGGVCKWKLTRHDSKTTEKTCAYASGKFSPVKST 1695
>gb|ANK58542.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 154 bits (390), Expect = 1e-40
Identities = 71/105 (67%), Positives = 86/105 (81%)
Frame = -1
Query: 449 LLNYSCNYIPNFGKLLSPLYAKTNPTGEKRLNQ*DWALVKQIKEQVQRLLDLEIPLENCC 270
+LNY+ YIPN G+LLSPLYAKT+PTG+KR+N DW LV QIKE+VQ+L DLE+P E+C
Sbjct: 1519 ILNYARAYIPNLGRLLSPLYAKTSPTGDKRMNAQDWKLVAQIKEEVQKLPDLELPPEDCF 1578
Query: 269 IVLDTDECMDGWGGVCKWKLHRYDPITLEKVCAYASGKFTLPKST 135
I+L+TD CM GWGG+CKWK R DP +EKVCAYASGKF+ KST
Sbjct: 1579 IILETDGCMTGWGGICKWKPKRNDPRRMEKVCAYASGKFSPIKST 1623
>ref|YP_006273075.1| polyprotein [Fig badnavirus 1]
gb|AEF56561.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 154 bits (390), Expect = 1e-40
Identities = 71/105 (67%), Positives = 86/105 (81%)
Frame = -1
Query: 449 LLNYSCNYIPNFGKLLSPLYAKTNPTGEKRLNQ*DWALVKQIKEQVQRLLDLEIPLENCC 270
+LNY+ YIPN G+LLSPLYAKT+PTG+KR+N DW LV QIKE+VQ+L DLE+P E+C
Sbjct: 1519 ILNYARAYIPNLGRLLSPLYAKTSPTGDKRMNAQDWKLVAQIKEEVQKLPDLELPPEDCF 1578
Query: 269 IVLDTDECMDGWGGVCKWKLHRYDPITLEKVCAYASGKFTLPKST 135
I+L+TD CM GWGG+CKWK R DP +EKVCAYASGKF+ KST
Sbjct: 1579 IILETDGCMTGWGGICKWKPKRNDPRRMEKVCAYASGKFSPIKST 1623
>gb|AND76971.1| polyprotein, partial [Fig badnavirus 1]
gb|AND76974.1| polyprotein, partial [Fig badnavirus 1]
Length = 397
Score = 149 bits (375), Expect = 2e-40
Identities = 69/105 (65%), Positives = 84/105 (80%)
Frame = -1
Query: 449 LLNYSCNYIPNFGKLLSPLYAKTNPTGEKRLNQ*DWALVKQIKEQVQRLLDLEIPLENCC 270
+LNY+ YIPN G+LLSPL AKT+PTG+KR+N DW LV QIKE+VQ+L DLE+P E+C
Sbjct: 240 ILNYTRAYIPNLGRLLSPLSAKTSPTGDKRMNAQDWKLVAQIKEEVQKLPDLELPPEDCF 299
Query: 269 IVLDTDECMDGWGGVCKWKLHRYDPITLEKVCAYASGKFTLPKST 135
I+L+TD CM GWGG+CKWK R DP +EKVCAYASGKF KS+
Sbjct: 300 IILETDGCMTGWGGICKWKPKRNDPRRMEKVCAYASGKFCPIKSS 344
>gb|ATZ69477.1| ORF3 polyprotein [Cacao swollen shoot Ghana L virus]
Length = 1853
Score = 154 bits (388), Expect = 3e-40
Identities = 67/105 (63%), Positives = 87/105 (82%)
Frame = -1
Query: 449 LLNYSCNYIPNFGKLLSPLYAKTNPTGEKRLNQ*DWALVKQIKEQVQRLLDLEIPLENCC 270
LLNY+ YIPN G++LSPLYAKT+PTGEKR+N+ DW L+K+IKE VQ+L DL IP CC
Sbjct: 1539 LLNYARIYIPNLGRMLSPLYAKTSPTGEKRMNRQDWHLIKEIKEMVQKLPDLAIPPAKCC 1598
Query: 269 IVLDTDECMDGWGGVCKWKLHRYDPITLEKVCAYASGKFTLPKST 135
I++++D CM+GWG VCKWK+ + D T+EK+CAYASGKF++ KST
Sbjct: 1599 IIIESDGCMEGWGAVCKWKIAKEDSRTMEKICAYASGKFSIIKST 1643
>gb|ANV20887.1| ORF3 protein [Dioscorea bacilliform RT virus]
Length = 1919
Score = 153 bits (387), Expect = 3e-40
Identities = 66/105 (62%), Positives = 86/105 (81%)
Frame = -1
Query: 449 LLNYSCNYIPNFGKLLSPLYAKTNPTGEKRLNQ*DWALVKQIKEQVQRLLDLEIPLENCC 270
+LNY+ NYIPN GK+L PLY+K +P+GEKR+N DW LV+++K+ VQ+L DLEIP ++CC
Sbjct: 1655 ILNYARNYIPNLGKILGPLYSKVSPSGEKRMNGQDWELVRKVKQLVQKLPDLEIPPKDCC 1714
Query: 269 IVLDTDECMDGWGGVCKWKLHRYDPITLEKVCAYASGKFTLPKST 135
I+++TD CMDGWGGVCKWK +DP E++CAYASGKF PKST
Sbjct: 1715 ILIETDGCMDGWGGVCKWKAFTHDPRKDERICAYASGKFDPPKST 1759
>gb|ANV20893.1| ORF3 protein [Dioscorea bacilliform RT virus]
Length = 1921
Score = 153 bits (387), Expect = 3e-40
Identities = 66/105 (62%), Positives = 86/105 (81%)
Frame = -1
Query: 449 LLNYSCNYIPNFGKLLSPLYAKTNPTGEKRLNQ*DWALVKQIKEQVQRLLDLEIPLENCC 270
+LNY+ NYIPN GK+L PLY+K +P+GEKR+N DW LV+++K+ VQ+L DLEIP ++CC
Sbjct: 1657 ILNYARNYIPNLGKILGPLYSKVSPSGEKRMNGQDWELVRKVKQLVQKLPDLEIPPKDCC 1716
Query: 269 IVLDTDECMDGWGGVCKWKLHRYDPITLEKVCAYASGKFTLPKST 135
I+++TD CMDGWGGVCKWK +DP E++CAYASGKF PKST
Sbjct: 1717 ILIETDGCMDGWGGVCKWKAFTHDPRKDERICAYASGKFDPPKST 1761
>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
Length = 1967
Score = 153 bits (386), Expect = 5e-40
Identities = 68/105 (64%), Positives = 87/105 (82%)
Frame = -1
Query: 449 LLNYSCNYIPNFGKLLSPLYAKTNPTGEKRLNQ*DWALVKQIKEQVQRLLDLEIPLENCC 270
LLNY+ +YIP+ G+LLSPLYAK +PTGE+R+N+ DWAL+ +I+ QVQ L LE+P +C
Sbjct: 1628 LLNYARSYIPHMGRLLSPLYAKVSPTGERRMNRQDWALIDKIRAQVQNLPALELPPADCF 1687
Query: 269 IVLDTDECMDGWGGVCKWKLHRYDPITLEKVCAYASGKFTLPKST 135
I+++TD CMDGWGGVCKWKL +YDP + E+VCAYASGKF PKST
Sbjct: 1688 IIIETDGCMDGWGGVCKWKLAQYDPRSSERVCAYASGKFNPPKST 1732
>gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]
Length = 1979
Score = 153 bits (386), Expect = 5e-40
Identities = 69/105 (65%), Positives = 86/105 (81%)
Frame = -1
Query: 449 LLNYSCNYIPNFGKLLSPLYAKTNPTGEKRLNQ*DWALVKQIKEQVQRLLDLEIPLENCC 270
LLNY+ NYIP+ G+LLSPLYAK +PTGE+R+N+ DWAL+ +I+ QVQ L LE+P +C
Sbjct: 1640 LLNYARNYIPHMGRLLSPLYAKVSPTGERRMNRQDWALIDKIRAQVQNLPALELPPADCF 1699
Query: 269 IVLDTDECMDGWGGVCKWKLHRYDPITLEKVCAYASGKFTLPKST 135
I+++TD CMDGWGGVCKWKL +YD + EKVCAYASGKF PKST
Sbjct: 1700 IIIETDGCMDGWGGVCKWKLAQYDSRSSEKVCAYASGKFNPPKST 1744
>gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]
Length = 1846
Score = 152 bits (384), Expect = 9e-40
Identities = 69/105 (65%), Positives = 84/105 (80%)
Frame = -1
Query: 449 LLNYSCNYIPNFGKLLSPLYAKTNPTGEKRLNQ*DWALVKQIKEQVQRLLDLEIPLENCC 270
LLNY+ YIPN G+LLSPLYAKT+PTG+KR+N DW LV IK VQ+L DLE+P E+C
Sbjct: 1515 LLNYARTYIPNLGRLLSPLYAKTSPTGDKRMNSQDWKLVADIKNLVQKLPDLEVPPESCY 1574
Query: 269 IVLDTDECMDGWGGVCKWKLHRYDPITLEKVCAYASGKFTLPKST 135
IVL+TD CM GWGG+CKWK+ ++DP + EK+CAYASGKF KST
Sbjct: 1575 IVLETDGCMTGWGGICKWKMLKHDPKSSEKICAYASGKFNPVKST 1619
>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
Length = 1968
Score = 152 bits (384), Expect = 9e-40
Identities = 67/105 (63%), Positives = 87/105 (82%)
Frame = -1
Query: 449 LLNYSCNYIPNFGKLLSPLYAKTNPTGEKRLNQ*DWALVKQIKEQVQRLLDLEIPLENCC 270
LLNY+ +YIP+ G+LLSPLYAK +PTGE+R+N+ DWAL+ +I+ QVQ L LE+P +C
Sbjct: 1629 LLNYARSYIPHMGRLLSPLYAKVSPTGERRMNRQDWALIDKIRAQVQNLPALELPPADCF 1688
Query: 269 IVLDTDECMDGWGGVCKWKLHRYDPITLEKVCAYASGKFTLPKST 135
I+++TD CMDGWGGVCKWK+ +YDP + E+VCAYASGKF PKST
Sbjct: 1689 IIIETDGCMDGWGGVCKWKIAQYDPRSSERVCAYASGKFNPPKST 1733
>gb|ACH86211.1| unknown [Citrus yellow mosaic virus]
Length = 1490
Score = 152 bits (383), Expect = 1e-39
Identities = 67/105 (63%), Positives = 87/105 (82%)
Frame = -1
Query: 449 LLNYSCNYIPNFGKLLSPLYAKTNPTGEKRLNQ*DWALVKQIKEQVQRLLDLEIPLENCC 270
LLNY+ +YIP+ G+LLSPLYAK +PTGE+R+N+ DWAL+ +I+ QVQ L LE+P +C
Sbjct: 1151 LLNYARSYIPHMGRLLSPLYAKVSPTGERRVNRQDWALIDKIRAQVQNLPALELPPADCF 1210
Query: 269 IVLDTDECMDGWGGVCKWKLHRYDPITLEKVCAYASGKFTLPKST 135
I+++TD CMDGWGGVCKWK+ +YDP + E+VCAYASGKF PKST
Sbjct: 1211 IIIETDGCMDGWGGVCKWKIAQYDPRSSERVCAYASGKFNPPKST 1255
>gb|ANK58539.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 152 bits (383), Expect = 1e-39
Identities = 70/105 (66%), Positives = 85/105 (80%)
Frame = -1
Query: 449 LLNYSCNYIPNFGKLLSPLYAKTNPTGEKRLNQ*DWALVKQIKEQVQRLLDLEIPLENCC 270
+LNY+ YIPN G+LLSPLYAKT+PTG+KR+N DW LV QIKE+VQ+L DLE+P E+C
Sbjct: 1519 ILNYARAYIPNLGRLLSPLYAKTSPTGDKRMNAQDWKLVAQIKEEVQKLPDLELPPEDCF 1578
Query: 269 IVLDTDECMDGWGGVCKWKLHRYDPITLEKVCAYASGKFTLPKST 135
I+L+T CM GWGG+CKWK R DP +EKVCAYASGKF+ KST
Sbjct: 1579 IILETHGCMTGWGGICKWKPKRNDPRRMEKVCAYASGKFSPIKST 1623
>gb|AER00538.1| ORF III [Citrus yellow mosaic virus]
Length = 1982
Score = 152 bits (383), Expect = 1e-39
Identities = 67/105 (63%), Positives = 87/105 (82%)
Frame = -1
Query: 449 LLNYSCNYIPNFGKLLSPLYAKTNPTGEKRLNQ*DWALVKQIKEQVQRLLDLEIPLENCC 270
LLNY+ +YIP+ G+LLSPLYAK +PTGE+R+N+ DWAL+ +I+ QVQ L LE+P +C
Sbjct: 1643 LLNYARSYIPHMGRLLSPLYAKVSPTGERRMNRQDWALIDKIRAQVQNLPALELPPADCF 1702
Query: 269 IVLDTDECMDGWGGVCKWKLHRYDPITLEKVCAYASGKFTLPKST 135
I+++TD CMDGWGGVCKWK+ +YDP + E+VCAYASGKF PKST
Sbjct: 1703 IIIETDGCMDGWGGVCKWKVAQYDPRSSERVCAYASGKFNPPKST 1747
>ref|NP_569153.1| unknown [Citrus yellow mosaic virus]
gb|AAL18495.1|AF347695_3 unknown [Citrus yellow mosaic virus]
Length = 1983
Score = 152 bits (383), Expect = 1e-39
Identities = 67/105 (63%), Positives = 87/105 (82%)
Frame = -1
Query: 449 LLNYSCNYIPNFGKLLSPLYAKTNPTGEKRLNQ*DWALVKQIKEQVQRLLDLEIPLENCC 270
LLNY+ +YIP+ G+LLSPLYAK +PTGE+R+N+ DWAL+ +I+ QVQ L LE+P +C
Sbjct: 1644 LLNYARSYIPHMGRLLSPLYAKVSPTGERRMNRQDWALIDKIRAQVQNLPALELPPADCF 1703
Query: 269 IVLDTDECMDGWGGVCKWKLHRYDPITLEKVCAYASGKFTLPKST 135
I+++TD CMDGWGGVCKWK+ +YDP + E+VCAYASGKF PKST
Sbjct: 1704 IIIETDGCMDGWGGVCKWKVAQYDPRSSERVCAYASGKFNPPKST 1748
>gb|ANV20890.1| ORF3 protein [Dioscorea bacilliform RT virus]
Length = 1921
Score = 151 bits (382), Expect = 2e-39
Identities = 65/105 (61%), Positives = 85/105 (80%)
Frame = -1
Query: 449 LLNYSCNYIPNFGKLLSPLYAKTNPTGEKRLNQ*DWALVKQIKEQVQRLLDLEIPLENCC 270
+LNY+ NYIPN GK+L PLY+K +P+GEKR+N DW LV+++K+ VQ+L DLEIP ++CC
Sbjct: 1657 ILNYARNYIPNLGKILGPLYSKVSPSGEKRMNGQDWELVRKVKQLVQKLPDLEIPPKDCC 1716
Query: 269 IVLDTDECMDGWGGVCKWKLHRYDPITLEKVCAYASGKFTLPKST 135
I+++ D CMDGWGGVCKWK +DP E++CAYASGKF PKST
Sbjct: 1717 ILIEADGCMDGWGGVCKWKAFTHDPRKDERICAYASGKFDPPKST 1761
>gb|AND76973.1| polyprotein, partial [Fig badnavirus 1]
Length = 397
Score = 146 bits (368), Expect = 2e-39
Identities = 68/105 (64%), Positives = 83/105 (79%)
Frame = -1
Query: 449 LLNYSCNYIPNFGKLLSPLYAKTNPTGEKRLNQ*DWALVKQIKEQVQRLLDLEIPLENCC 270
+LNY+ YIPN G+LLSPL AKT+PTG+KR+N DW LV QIKE+VQ+L DLE+P E+C
Sbjct: 240 ILNYTRAYIPNLGRLLSPLSAKTSPTGDKRMNAQDWKLVAQIKEEVQKLPDLELPPEDCF 299
Query: 269 IVLDTDECMDGWGGVCKWKLHRYDPITLEKVCAYASGKFTLPKST 135
I+L+T CM GWGG+CKWK R DP +EKVCAYASGKF KS+
Sbjct: 300 IILETHGCMTGWGGICKWKPKRNDPRRMEKVCAYASGKFCPIKSS 344
>gb|AND76972.1| polyprotein, partial [Fig badnavirus 1]
Length = 397
Score = 146 bits (368), Expect = 2e-39
Identities = 68/105 (64%), Positives = 83/105 (79%)
Frame = -1
Query: 449 LLNYSCNYIPNFGKLLSPLYAKTNPTGEKRLNQ*DWALVKQIKEQVQRLLDLEIPLENCC 270
+LNY+ YIPN G+LLSPL AKT+PTG+KR+N DW LV QIKE+VQ+L LE+P E+C
Sbjct: 240 ILNYTRAYIPNLGRLLSPLSAKTSPTGDKRMNAQDWKLVAQIKEEVQKLPHLELPPEDCF 299
Query: 269 IVLDTDECMDGWGGVCKWKLHRYDPITLEKVCAYASGKFTLPKST 135
I+L+TD CM GWGG+CKWK R DP +EKVCAYASGKF KS+
Sbjct: 300 IILETDGCMTGWGGICKWKPKRNDPRRMEKVCAYASGKFCPIKSS 344
>ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]
gb|AHI90954.1| polyprotein [Hibiscus bacilliform virus GD1]
Length = 1892
Score = 150 bits (380), Expect = 3e-39
Identities = 69/105 (65%), Positives = 83/105 (79%)
Frame = -1
Query: 449 LLNYSCNYIPNFGKLLSPLYAKTNPTGEKRLNQ*DWALVKQIKEQVQRLLDLEIPLENCC 270
LLNY+ YIP G+LLSPLYAK +P GEK+LN+ DW LV+QIKEQVQ+L DLE+P + C
Sbjct: 1577 LLNYARAYIPQMGRLLSPLYAKVSPKGEKKLNKEDWKLVRQIKEQVQQLPDLELPPQECF 1636
Query: 269 IVLDTDECMDGWGGVCKWKLHRYDPITLEKVCAYASGKFTLPKST 135
I+L+TD CM+GWGGVCKWK YDP E++CAYASGKF KST
Sbjct: 1637 IILETDGCMEGWGGVCKWKKKEYDPKNTERICAYASGKFHPIKST 1681
>gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus]
Length = 1976
Score = 150 bits (380), Expect = 3e-39
Identities = 67/106 (63%), Positives = 87/106 (82%)
Frame = -1
Query: 452 VLLNYSCNYIPNFGKLLSPLYAKTNPTGEKRLNQ*DWALVKQIKEQVQRLLDLEIPLENC 273
+L+NY+ +YIP+ G+LLSPLYAK +PTGE+R+N+ DWAL+ +I+ QVQ L LE+P +C
Sbjct: 1636 LLINYARSYIPHMGRLLSPLYAKVSPTGERRMNRQDWALIDKIRAQVQNLPALELPPADC 1695
Query: 272 CIVLDTDECMDGWGGVCKWKLHRYDPITLEKVCAYASGKFTLPKST 135
I+++TD CMDGWGGVCKWKL +YD + EKVCAYASGKF PKST
Sbjct: 1696 FIIIETDGCMDGWGGVCKWKLAQYDSRSSEKVCAYASGKFNPPKST 1741