BLASTX nr result
ID: Cheilocostus21_contig00063345
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00063345
(452 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009408594.1| P3b [Jujube mosaic-associated virus] >gi|121... 120 1e-28
gb|ATZ69518.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus] 118 5e-28
gb|ATZ69526.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus] 118 5e-28
gb|ATZ69522.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus] 118 5e-28
gb|ATZ69506.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus] 118 7e-28
gb|ATZ69514.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus] 117 1e-27
gb|ATZ69510.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus] 117 1e-27
gb|ATV81254.1| polyprotein [Grapevine badnavirus 1] 117 1e-27
gb|ATZ69490.1| ORF3 polyprotein [Cacao swollen shoot Ghana Q virus] 114 1e-26
gb|ATZ69502.1| ORF3 polyprotein [Cacao swollen shoot Ghana Q virus] 114 1e-26
gb|ATZ69498.1| ORF3 polyprotein [Cacao swollen shoot Ghana Q virus] 114 1e-26
gb|ATZ69494.1| ORF3 polyprotein [Cacao swollen shoot Ghana Q virus] 114 1e-26
gb|PKU61844.1| RNA-directed DNA polymerase [Dendrobium catenatum] 110 2e-25
gb|ABQ45369.1| polyprotein, partial [Citrus yellow mosaic virus] 104 4e-25
gb|ABN15090.1| polyprotein, partial [Citrus yellow mosaic virus] 104 9e-25
gb|AAW30012.1| polyprotein, partial [Citrus yellow mosaic virus] 104 9e-24
ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discolor... 103 7e-23
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus] 103 1e-22
gb|AER00544.1| ORF III [Citrus yellow mosaic virus] 102 2e-22
gb|ATZ69467.1| ORF3 polyprotein [Cacao swollen shoot Ghana J virus] 101 5e-22
>ref|YP_009408594.1| P3b [Jujube mosaic-associated virus]
gb|ASL69990.1| P3b [Jujube mosaic-associated virus]
Length = 1597
Score = 120 bits (301), Expect = 1e-28
Identities = 66/150 (44%), Positives = 87/150 (58%)
Frame = -1
Query: 452 LEQNSTIVCFSGINSRQTADKKLKSGRMHIGTNTFHILYTYRFKMTLGDGIQMIIRYNFI 273
LE+NS V F+G+NSRQ A+ KLK G+M IG N F I +TY F M LGDGIQMII NF+
Sbjct: 905 LEENSYTVYFNGVNSRQAANWKLKGGQMQIGENKFKIPFTYSFNMNLGDGIQMIIGCNFV 964
Query: 272 KAMQGGLRIEGNSHILQEPYDNKHHSYSIGSSH*RNRPG*RRISGHQRISLLQP*R*PQS 93
+AMQGG+RIEGN + + S G + +SL Q
Sbjct: 965 RAMQGGIRIEGNQVTFYKQLTTIETTMSAGPCIQEEEDLDAAVM--TELSLFSAVPSNQK 1022
Query: 92 FISKFDPLIQRLKNAGFIGENPIKHWSKNQ 3
F+ ++ + RLK G+IG+NP++HW KNQ
Sbjct: 1023 FLQQYRGTLDRLKEQGYIGDNPLQHWEKNQ 1052
>gb|ATZ69518.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
Length = 1833
Score = 118 bits (296), Expect = 5e-28
Identities = 68/152 (44%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Frame = -1
Query: 452 LEQNSTIVCFSGINSRQTADKKLKSGRMHIGTNTFHILYTYRFKMTLGDGIQMIIRYNFI 273
LE N+ +V FSGINS T+ KKLK+GRM IG N+F I YTY F M + DGIQMI+ NFI
Sbjct: 1097 LEDNTFVVHFSGINSTSTSRKKLKNGRMRIGENSFRIPYTYAFPMKIADGIQMIVGCNFI 1156
Query: 272 KAMQGGLRIEGNSHILQEPYDNKHHS--YSIGSSH*RNRPG*RRISGHQRISLLQP*R*P 99
+ MQGGLRIEGN+ + + S ++ R++ + +Q
Sbjct: 1157 RNMQGGLRIEGNTITFYKFLTSVQTSTIAAVIEEEEVEETDYLRLTEILAVETIQQ---D 1213
Query: 98 QSFISKFDPLIQRLKNAGFIGENPIKHWSKNQ 3
F S+F +I+ LK GFIGENP++HWSKN+
Sbjct: 1214 NHFSSRFKGVIEELKQQGFIGENPLQHWSKNR 1245
>gb|ATZ69526.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
Length = 1833
Score = 118 bits (296), Expect = 5e-28
Identities = 68/152 (44%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Frame = -1
Query: 452 LEQNSTIVCFSGINSRQTADKKLKSGRMHIGTNTFHILYTYRFKMTLGDGIQMIIRYNFI 273
LE N+ +V FSGINS T+ KKLK+GRM IG N+F I YTY F M + DGIQMI+ NFI
Sbjct: 1097 LEDNTFVVHFSGINSTSTSRKKLKNGRMRIGENSFRIPYTYAFPMKIADGIQMIVGCNFI 1156
Query: 272 KAMQGGLRIEGNSHILQEPYDNKHHS--YSIGSSH*RNRPG*RRISGHQRISLLQP*R*P 99
+ MQGGLRIEGN+ + + S ++ R++ + +Q
Sbjct: 1157 RNMQGGLRIEGNTITFYKFLTSVQTSTIAAVIEEEEVEETDYLRLTEILAVETIQQ---D 1213
Query: 98 QSFISKFDPLIQRLKNAGFIGENPIKHWSKNQ 3
F S+F +I+ LK GFIGENP++HWSKN+
Sbjct: 1214 NHFSSRFKGVIEELKQQGFIGENPLQHWSKNR 1245
>gb|ATZ69522.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
Length = 1833
Score = 118 bits (296), Expect = 5e-28
Identities = 68/152 (44%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Frame = -1
Query: 452 LEQNSTIVCFSGINSRQTADKKLKSGRMHIGTNTFHILYTYRFKMTLGDGIQMIIRYNFI 273
LE N+ +V FSGINS T+ KKLK+GRM IG N+F I YTY F M + DGIQMI+ NFI
Sbjct: 1097 LEDNTFVVHFSGINSTSTSRKKLKNGRMRIGENSFRIPYTYAFPMKIADGIQMIVGCNFI 1156
Query: 272 KAMQGGLRIEGNSHILQEPYDNKHHS--YSIGSSH*RNRPG*RRISGHQRISLLQP*R*P 99
+ MQGGLRIEGN+ + + S ++ R++ + +Q
Sbjct: 1157 RNMQGGLRIEGNTITFYKFLTSVQTSTIAAVIEEEEVEETDYLRLTEILAVETIQQ---D 1213
Query: 98 QSFISKFDPLIQRLKNAGFIGENPIKHWSKNQ 3
F S+F +I+ LK GFIGENP++HWSKN+
Sbjct: 1214 NHFSSRFKGVIEELKQQGFIGENPLQHWSKNR 1245
>gb|ATZ69506.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
Length = 1839
Score = 118 bits (295), Expect = 7e-28
Identities = 69/152 (45%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Frame = -1
Query: 452 LEQNSTIVCFSGINSRQTADKKLKSGRMHIGTNTFHILYTYRFKMTLGDGIQMIIRYNFI 273
LE N+ +V FSGINS T+ KKLK+GRM IG N+F I YTY F M + DGIQMII NFI
Sbjct: 1103 LEDNTFVVHFSGINSTSTSRKKLKNGRMRIGENSFRIPYTYAFPMKIADGIQMIIGCNFI 1162
Query: 272 KAMQGGLRIEGNSHILQEPYDNKHHS--YSIGSSH*RNRPG*RRISGHQRISLLQP*R*P 99
+ MQGGLRIEGN+ + + S ++ R++ + +Q
Sbjct: 1163 RNMQGGLRIEGNTITFYKFLTSVQTSTIAAVIEEEEVEETDYLRLTEILAVETIQQ---D 1219
Query: 98 QSFISKFDPLIQRLKNAGFIGENPIKHWSKNQ 3
F S+F +I+ LK GFIGENP++HWSKN+
Sbjct: 1220 NHFSSRFKGVIEGLKQQGFIGENPLQHWSKNR 1251
>gb|ATZ69514.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
Length = 1833
Score = 117 bits (294), Expect = 1e-27
Identities = 68/152 (44%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Frame = -1
Query: 452 LEQNSTIVCFSGINSRQTADKKLKSGRMHIGTNTFHILYTYRFKMTLGDGIQMIIRYNFI 273
LE N+ +V FSGINS T+ KKLK+GRM IG N+F I YTY F M + DGIQMI+ NFI
Sbjct: 1097 LEDNTFVVHFSGINSTSTSRKKLKNGRMRIGENSFRIPYTYAFPMKIADGIQMIVGCNFI 1156
Query: 272 KAMQGGLRIEGNSHILQEPYDNKHHS--YSIGSSH*RNRPG*RRISGHQRISLLQP*R*P 99
+ MQGGLRIEGN+ + + S ++ R++ + +Q
Sbjct: 1157 RNMQGGLRIEGNTITFYKFLTSVQTSTIAAVIEEEEVEETDYLRLTEILAVETIQQ---D 1213
Query: 98 QSFISKFDPLIQRLKNAGFIGENPIKHWSKNQ 3
F S+F +I+ LK GFIGENP++HWSKN+
Sbjct: 1214 NHFSSRFKGVIEGLKQQGFIGENPLQHWSKNR 1245
>gb|ATZ69510.1| ORF3 polyprotein [Cacao swollen shoot Ghana R virus]
Length = 1833
Score = 117 bits (294), Expect = 1e-27
Identities = 68/152 (44%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Frame = -1
Query: 452 LEQNSTIVCFSGINSRQTADKKLKSGRMHIGTNTFHILYTYRFKMTLGDGIQMIIRYNFI 273
LE N+ +V FSGINS T+ KKLK+GRM IG N+F I YTY F M + DGIQMI+ NFI
Sbjct: 1097 LEDNTFVVHFSGINSTSTSRKKLKNGRMRIGENSFRIPYTYAFPMKIADGIQMIVGCNFI 1156
Query: 272 KAMQGGLRIEGNSHILQEPYDNKHHS--YSIGSSH*RNRPG*RRISGHQRISLLQP*R*P 99
+ MQGGLRIEGN+ + + S ++ R++ + +Q
Sbjct: 1157 RNMQGGLRIEGNTITFYKFLTSVQTSTIAAVIEEEEVEETDYLRLTEILAVETIQQ---D 1213
Query: 98 QSFISKFDPLIQRLKNAGFIGENPIKHWSKNQ 3
F S+F +I+ LK GFIGENP++HWSKN+
Sbjct: 1214 NHFSSRFKGVIEGLKQQGFIGENPLQHWSKNR 1245
>gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]
Length = 1846
Score = 117 bits (293), Expect = 1e-27
Identities = 67/169 (39%), Positives = 94/169 (55%), Gaps = 19/169 (11%)
Frame = -1
Query: 452 LEQNSTIVCFSGINSRQTADKKLKSGRMHIGTNTFHILYTYRFKMTLGDGIQMIIRYNFI 273
LE+N+ +V FSG+NS TA+KKLK GRM IG N F I YTY F + + DG+QMI+ NFI
Sbjct: 1103 LEENTYLVRFSGVNSTMTANKKLKGGRMFIGENMFRIPYTYSFPIKMEDGVQMIVGCNFI 1162
Query: 272 KAMQGGLRIEGN-------------------SHILQEPYDNKHHSYSIGSSH*RNRPG*R 150
+AM GG+RIEGN + +LQE D++
Sbjct: 1163 RAMYGGVRIEGNVVTFYKNLTVINTSQSTEIARMLQEDVDDE------------------ 1204
Query: 149 RISGHQRISLLQP*R*PQSFISKFDPLIQRLKNAGFIGENPIKHWSKNQ 3
+ Q + + +SF+ +F+ LI +LK AG+IGENP++HW KN+
Sbjct: 1205 ELWQIQEAVYINIGKSRESFLKRFEALINQLKEAGYIGENPLQHWEKNR 1253
>gb|ATZ69490.1| ORF3 polyprotein [Cacao swollen shoot Ghana Q virus]
Length = 1853
Score = 114 bits (286), Expect = 1e-26
Identities = 67/150 (44%), Positives = 87/150 (58%)
Frame = -1
Query: 452 LEQNSTIVCFSGINSRQTADKKLKSGRMHIGTNTFHILYTYRFKMTLGDGIQMIIRYNFI 273
LE N+ V F+GINS T+ KKLK+GRM IG NTF I +TY F M + DGIQMI+ NFI
Sbjct: 1117 LEDNTFTVQFNGINSTSTSKKKLKNGRMKIGENTFRIPFTYAFAMKIADGIQMILGCNFI 1176
Query: 272 KAMQGGLRIEGNSHILQEPYDNKHHSYSIGSSH*RNRPG*RRISGHQRISLLQP*R*PQS 93
++MQGGLRIEGN + S +I ++ + I + +
Sbjct: 1177 RSMQGGLRIEGNIVTFYKNLTTVQTS-TIAAAIEEEEVKEKDYLHWTEIVAKETTMQEDN 1235
Query: 92 FISKFDPLIQRLKNAGFIGENPIKHWSKNQ 3
F S F I+ LK GFIGENP++HWSKN+
Sbjct: 1236 FASSFKKEIEELKQQGFIGENPLQHWSKNR 1265
>gb|ATZ69502.1| ORF3 polyprotein [Cacao swollen shoot Ghana Q virus]
Length = 1858
Score = 114 bits (286), Expect = 1e-26
Identities = 67/150 (44%), Positives = 87/150 (58%)
Frame = -1
Query: 452 LEQNSTIVCFSGINSRQTADKKLKSGRMHIGTNTFHILYTYRFKMTLGDGIQMIIRYNFI 273
LE N+ V F+GINS T+ KKLK+GRM IG NTF I +TY F M + DGIQMI+ NFI
Sbjct: 1122 LEDNTFTVQFNGINSTSTSKKKLKNGRMKIGENTFRIPFTYAFAMKIADGIQMILGCNFI 1181
Query: 272 KAMQGGLRIEGNSHILQEPYDNKHHSYSIGSSH*RNRPG*RRISGHQRISLLQP*R*PQS 93
++MQGGLRIEGN + S +I ++ + I + +
Sbjct: 1182 RSMQGGLRIEGNIVTFYKNLTTVQTS-TIAATIEEEEVKEKDYLHWTEIVAKETTMQEDN 1240
Query: 92 FISKFDPLIQRLKNAGFIGENPIKHWSKNQ 3
F S F I+ LK GFIGENP++HWSKN+
Sbjct: 1241 FASSFKKEIEELKQQGFIGENPLQHWSKNR 1270
>gb|ATZ69498.1| ORF3 polyprotein [Cacao swollen shoot Ghana Q virus]
Length = 1859
Score = 114 bits (286), Expect = 1e-26
Identities = 67/150 (44%), Positives = 87/150 (58%)
Frame = -1
Query: 452 LEQNSTIVCFSGINSRQTADKKLKSGRMHIGTNTFHILYTYRFKMTLGDGIQMIIRYNFI 273
LE N+ V F+GINS T+ KKLK+GRM IG NTF I +TY F M + DGIQMI+ NFI
Sbjct: 1123 LEDNTFTVQFNGINSTSTSKKKLKNGRMKIGENTFRIPFTYAFAMKIADGIQMILGCNFI 1182
Query: 272 KAMQGGLRIEGNSHILQEPYDNKHHSYSIGSSH*RNRPG*RRISGHQRISLLQP*R*PQS 93
++MQGGLRIEGN + S +I ++ + I + +
Sbjct: 1183 RSMQGGLRIEGNVVTFYKNLTTVQTS-TIAAAIEEEEVKEKDYLHWTEIVAKETTMQEDN 1241
Query: 92 FISKFDPLIQRLKNAGFIGENPIKHWSKNQ 3
F S F I+ LK GFIGENP++HWSKN+
Sbjct: 1242 FASSFKKEIEELKQQGFIGENPLQHWSKNR 1271
>gb|ATZ69494.1| ORF3 polyprotein [Cacao swollen shoot Ghana Q virus]
Length = 1941
Score = 114 bits (286), Expect = 1e-26
Identities = 67/150 (44%), Positives = 87/150 (58%)
Frame = -1
Query: 452 LEQNSTIVCFSGINSRQTADKKLKSGRMHIGTNTFHILYTYRFKMTLGDGIQMIIRYNFI 273
LE N+ V F+GINS T+ KKLK+GRM IG NTF I +TY F M + DGIQMI+ NFI
Sbjct: 1205 LEDNTFTVQFNGINSTSTSKKKLKNGRMKIGENTFRIPFTYAFAMKIADGIQMILGCNFI 1264
Query: 272 KAMQGGLRIEGNSHILQEPYDNKHHSYSIGSSH*RNRPG*RRISGHQRISLLQP*R*PQS 93
++MQGGLRIEGN + S +I ++ + I + +
Sbjct: 1265 RSMQGGLRIEGNIVTFYKNLTTVQTS-TIAAAIEEEEVKEKDYLHWTEIVAKETTMQEDN 1323
Query: 92 FISKFDPLIQRLKNAGFIGENPIKHWSKNQ 3
F S F I+ LK GFIGENP++HWSKN+
Sbjct: 1324 FASSFKKEIEELKQQGFIGENPLQHWSKNR 1353
>gb|PKU61844.1| RNA-directed DNA polymerase [Dendrobium catenatum]
Length = 531
Score = 110 bits (275), Expect = 2e-25
Identities = 67/153 (43%), Positives = 87/153 (56%), Gaps = 3/153 (1%)
Frame = -1
Query: 452 LEQNSTIVCFSGINSRQTADKKLKSGRMHIGTNTFHILYTYRFKMTLGDGIQMIIRYNFI 273
LE N +V F G+NS TADKKLK GRM IG F I YTY F M +G+ IQM+I NFI
Sbjct: 104 LEPNPFLVHFKGVNSETTADKKLKGGRMVIGDQQFRIPYTYAFPMKIGEDIQMLIGCNFI 163
Query: 272 KAMQGGLRIEGNSHILQEPYDNKH---HSYSIGSSH*RNRPG*RRISGHQRISLLQP*R* 102
+AM GG+RIEG+ + H S I R+S H+ I +
Sbjct: 164 RAMHGGVRIEGDEVTFYKNVTTIHANITSSCIEDEEYGMAQEIERMSAHE-IQI------ 216
Query: 101 PQSFISKFDPLIQRLKNAGFIGENPIKHWSKNQ 3
P F +F+ LI++L+ AG+IG+NPIKHW N+
Sbjct: 217 PAPFKRQFEGLIKQLQAAGYIGDNPIKHWLANK 249
>gb|ABQ45369.1| polyprotein, partial [Citrus yellow mosaic virus]
Length = 196
Score = 104 bits (259), Expect = 4e-25
Identities = 60/154 (38%), Positives = 90/154 (58%), Gaps = 5/154 (3%)
Frame = -1
Query: 452 LEQNSTIVCFSGINSRQTADKKLKSGRMHIGTNTFHILYTYRFKMTLGDGIQMIIRYNFI 273
LE+NS +V FSGINS+Q +K+K+G+M I + F I Y Y F+M +GDGIQ+I+ NFI
Sbjct: 43 LEENSFVVNFSGINSKQQVKQKIKAGKMFINEHYFRIPYCYSFEMQIGDGIQLILGCNFI 102
Query: 272 KAMQGGLRIEGNSHILQEPYD--NKHHSYSIGSSH*RNRPG*RRISGHQRISLLQP*R*P 99
++M GG+R+EGN+ + N + + +R + H+ I +
Sbjct: 103 RSMYGGVRLEGNTITFYKQITSINTRLAAPLLKQDEEDRGEELNLEEHRLIQEMVAYSTE 162
Query: 98 QSFI---SKFDPLIQRLKNAGFIGENPIKHWSKN 6
+ F+ KF LIQ LK G+IGE P+K+W+KN
Sbjct: 163 RPFVKFQQKFAGLIQELKAQGYIGEEPMKYWAKN 196
>gb|ABN15090.1| polyprotein, partial [Citrus yellow mosaic virus]
Length = 226
Score = 104 bits (259), Expect = 9e-25
Identities = 60/154 (38%), Positives = 90/154 (58%), Gaps = 5/154 (3%)
Frame = -1
Query: 452 LEQNSTIVCFSGINSRQTADKKLKSGRMHIGTNTFHILYTYRFKMTLGDGIQMIIRYNFI 273
LE+NS +V FSGINS+Q +K+K+G+M I + F I Y Y F+M +GDGIQ+I+ NFI
Sbjct: 73 LEENSFVVNFSGINSKQQVRQKIKAGKMFINEHYFRIPYCYSFEMQIGDGIQLILGCNFI 132
Query: 272 KAMQGGLRIEGNSHILQEPYD--NKHHSYSIGSSH*RNRPG*RRISGHQRISLLQP*R*P 99
++M GG+R+EGN+ + N + + +R + H+ I +
Sbjct: 133 RSMYGGVRLEGNTITFYKQITSINTRLAAPLLKQDEEDREEELNLEEHRLIQEMVAYSTE 192
Query: 98 QSFI---SKFDPLIQRLKNAGFIGENPIKHWSKN 6
+ F+ KF LIQ LK G+IGE P+K+W+KN
Sbjct: 193 RPFVKFQQKFAGLIQELKAQGYIGEEPMKYWAKN 226
>gb|AAW30012.1| polyprotein, partial [Citrus yellow mosaic virus]
Length = 357
Score = 104 bits (259), Expect = 9e-24
Identities = 63/166 (37%), Positives = 92/166 (55%), Gaps = 16/166 (9%)
Frame = -1
Query: 452 LEQNSTIVCFSGINSRQTADKKLKSGRMHIGTNTFHILYTYRFKMTLGDGIQMIIRYNFI 273
LE+NS +V FSGINS+Q +KLK+G+M I + F I Y Y F+M +GDGIQ+I+ NFI
Sbjct: 21 LEENSFVVNFSGINSKQQVKQKLKAGKMFINEHYFRIPYCYSFEMQIGDGIQLILGCNFI 80
Query: 272 KAMQGGLRIEGN----------------SHILQEPYDNKHHSYSIGSSH*RNRPG*RRIS 141
++M GG+R+EGN + +L++ + K +++ R I
Sbjct: 81 RSMYGGVRLEGNTVTFYKQITSINTRLAAPLLKQEKEEKEEEFNLDEH--------RLIQ 132
Query: 140 GHQRISLLQP*R*PQSFISKFDPLIQRLKNAGFIGENPIKHWSKNQ 3
S +P F KF LIQ LK G+IGE P+K+W+KN+
Sbjct: 133 EMVAYSTERP---FVHFQQKFAGLIQELKAQGYIGEEPMKYWAKNK 175
>ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
emb|CDN68224.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
Length = 1830
Score = 103 bits (258), Expect = 7e-23
Identities = 58/149 (38%), Positives = 81/149 (54%)
Frame = -1
Query: 452 LEQNSTIVCFSGINSRQTADKKLKSGRMHIGTNTFHILYTYRFKMTLGDGIQMIIRYNFI 273
+E + V +G+NS Q KKLK GRM IG N+F I +TY + +GD IQMI+ NFI
Sbjct: 1087 IEDSPYEVQLNGVNSVQKTKKKLKYGRMMIGMNSFRIPFTYSLPLVIGDNIQMIVGCNFI 1146
Query: 272 KAMQGGLRIEGNSHILQEPYDNKHHSYSIGSSH*RNRPG*RRISGHQRISLLQP*R*PQS 93
+AM GG+RIEGN + S + + Q + + +S
Sbjct: 1147 RAMYGGVRIEGNEVTFYKNLTKISTSPEVSVNVLEEEVCEEEYLQIQDMVVCNIGESRES 1206
Query: 92 FISKFDPLIQRLKNAGFIGENPIKHWSKN 6
F+ KF PLI+ + AG+IGENP++HW KN
Sbjct: 1207 FLKKFKPLIEEFQEAGYIGENPLQHWEKN 1235
>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
Length = 1967
Score = 103 bits (257), Expect = 1e-22
Identities = 59/155 (38%), Positives = 90/155 (58%), Gaps = 5/155 (3%)
Frame = -1
Query: 452 LEQNSTIVCFSGINSRQTADKKLKSGRMHIGTNTFHILYTYRFKMTLGDGIQMIIRYNFI 273
LE+NS +V FSGINS+Q +K+K+G+M I + F I Y Y F+M +GDGIQ+I+ NFI
Sbjct: 1212 LEENSFVVNFSGINSKQQVKQKIKAGKMFINEHYFRIPYCYSFEMQIGDGIQLILGCNFI 1271
Query: 272 KAMQGGLRIEGNSHILQEPYD--NKHHSYSIGSSH*RNRPG*RRISGHQRISLLQP*R*P 99
++M GG+R+EGN+ + N + + + + H+ I +
Sbjct: 1272 RSMYGGVRLEGNTVTFYKQITSINTRLAAPLLKQDEEEKEEELNLDEHRLIQEMVAYSTE 1331
Query: 98 QSFI---SKFDPLIQRLKNAGFIGENPIKHWSKNQ 3
+ F+ KF LIQ LK G+IGE P+K+W+KN+
Sbjct: 1332 RPFVHFQQKFAGLIQELKAQGYIGEEPMKYWAKNK 1366
>gb|AER00544.1| ORF III [Citrus yellow mosaic virus]
Length = 1976
Score = 102 bits (254), Expect = 2e-22
Identities = 60/155 (38%), Positives = 89/155 (57%), Gaps = 5/155 (3%)
Frame = -1
Query: 452 LEQNSTIVCFSGINSRQTADKKLKSGRMHIGTNTFHILYTYRFKMTLGDGIQMIIRYNFI 273
LE+NS +V FSGINS+Q +K+KSG+M I + F I Y Y F+M +GDGIQ+I+ NFI
Sbjct: 1220 LEENSFVVNFSGINSKQQVKQKIKSGKMFINEHYFRIPYCYSFEMQIGDGIQLILGCNFI 1279
Query: 272 KAMQGGLRIEGNSHILQEPYD--NKHHSYSIGSSH*RNRPG*RRISGHQRISLLQP*R*P 99
++M GG+R+EGN+ + N + + + + H+ I +
Sbjct: 1280 RSMYGGVRLEGNTITFYKQITSINTRLAAPLLKQDEEEKEEELNLQEHRLIQEMVAYSTE 1339
Query: 98 QSFI---SKFDPLIQRLKNAGFIGENPIKHWSKNQ 3
+SFI KF +IQ LK G+IGE P+K+W+ Q
Sbjct: 1340 RSFIHFQQKFAGIIQELKAQGYIGEEPMKYWTIKQ 1374
>gb|ATZ69467.1| ORF3 polyprotein [Cacao swollen shoot Ghana J virus]
Length = 1868
Score = 101 bits (252), Expect = 5e-22
Identities = 67/190 (35%), Positives = 90/190 (47%), Gaps = 40/190 (21%)
Frame = -1
Query: 452 LEQNSTIVCFSGINSRQTADKKLKSGRMHIGTNTFHILYTYRFKMTLGDGIQMIIRYNFI 273
+EQN+ +V F GINS+Q DKKLK GRM I + F I Y Y F +TLGDGIQMI+ NFI
Sbjct: 1114 IEQNTFLVQFRGINSQQQVDKKLKYGRMTISDHHFRIPYCYAFPLTLGDGIQMILGCNFI 1173
Query: 272 KAMQGGLRIEGNS----------------------------------------HILQEPY 213
+ M GGLRIEGN + ++
Sbjct: 1174 RNMYGGLRIEGNQITFYKNITTINSKTAAALVGGTTNFSFPEQEGWLQLQLAFNEAEDDN 1233
Query: 212 DNKHHSYSIGSSH*RNRPG*RRISGHQRISLLQP*R*PQSFISKFDPLIQRLKNAGFIGE 33
DN+ H + + I HQ+ LQP + + L+ +LK G+IGE
Sbjct: 1234 DNEVHEVHEEAHEVHEQIVSHAIQNHQK--QLQP---------ELNDLLDKLKEQGYIGE 1282
Query: 32 NPIKHWSKNQ 3
NP+KHW+ N+
Sbjct: 1283 NPLKHWANNK 1292