BLASTX nr result

ID: Cheilocostus21_contig00063092 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00063092
         (475 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OAY74722.1| putative ribonuclease H protein [Ananas comosus]        59   4e-07
ref|XP_020096969.1| uncharacterized protein LOC109716078, partia...    59   4e-07
ref|XP_012857002.1| PREDICTED: uncharacterized protein LOC105976...    56   5e-06
ref|XP_016751360.1| PREDICTED: uncharacterized protein LOC107959...    56   5e-06

>gb|OAY74722.1| putative ribonuclease H protein [Ananas comosus]
          Length = 851

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/104 (33%), Positives = 54/104 (51%)
 Frame = +2

Query: 83  VSDLMQGQQWCAFAIHVIGGPSITSAISNIPLFDVPEEDSWI*GEDPLGNSINKSAYLFM 262
           ++ +++  +WC  +I  + G  +  AI+N+ L + P  D W+    P G +   S Y F 
Sbjct: 455 INQIIENGEWCYNSIEGLVGEDLVDAITNLQLGEGP--DKWVWSLHPQGKARAGSVYSF- 511

Query: 263 LRNRLDLSNPYEGWKCLWLLPVSPRIKIFNCKLVHNRLVTSAYL 394
           L    D  N ++GWK LW L V+PR+K F  K    RL T  +L
Sbjct: 512 LNGHTD--NCWDGWKQLWGLAVAPRVKTFLWKYFWKRLPTKDFL 553


>ref|XP_020096969.1| uncharacterized protein LOC109716078, partial [Ananas comosus]
          Length = 1220

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/104 (33%), Positives = 54/104 (51%)
 Frame = +2

Query: 83   VSDLMQGQQWCAFAIHVIGGPSITSAISNIPLFDVPEEDSWI*GEDPLGNSINKSAYLFM 262
            ++ +++  +WC  +I  + G  +  AI+N+ L + P  D W+    P G +   S Y F 
Sbjct: 982  INQIIENGEWCYNSIEGLVGEDLVDAITNLQLGEGP--DKWVWSLHPQGKARAGSVYSF- 1038

Query: 263  LRNRLDLSNPYEGWKCLWLLPVSPRIKIFNCKLVHNRLVTSAYL 394
            L    D  N ++GWK LW L V+PR+K F  K    RL T  +L
Sbjct: 1039 LNGHTD--NCWDGWKQLWGLAVAPRVKTFLWKYFWKRLPTKDFL 1080


>ref|XP_012857002.1| PREDICTED: uncharacterized protein LOC105976270 [Erythranthe guttata]
          Length = 1175

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 38/119 (31%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
 Frame = +2

Query: 83   VSDLMQGQQ--WCAFAIHVIGGPSITSAISNIPLFDVPEEDSWI*GEDPLGNSINKSAYL 256
            VSDL++     W    +H I        I  +PL      DSW+    P GN   +SAY 
Sbjct: 781  VSDLLESDSNSWNLQLVHNIFWEVDVDRILGVPLGGPHTNDSWVWHHSPKGNFTVRSAYH 840

Query: 257  FMLRNRLDLSNPY-------------EGWKCLWLLPVSPRIKIFNCKLVHNRLVTSAYL 394
             +L N  +LS+P                WKC+W LP+ P+I+IF  +   N L T+  L
Sbjct: 841  MILNNH-NLSSPMGIGNNGSISGTNNREWKCIWRLPIPPKIQIFLWRFCGNNLPTNEEL 898


>ref|XP_016751360.1| PREDICTED: uncharacterized protein LOC107959736 [Gossypium hirsutum]
          Length = 1760

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
 Frame = +2

Query: 65   SSNDLLVSDLMQGQQ--WCAFAIHVIGGPSITSAISNIPLFDVPEEDSWI*GEDPLGNSI 238
            + N+  V DL  G    W A  +  + G      I NIP+ DV + D  I   +P G   
Sbjct: 1363 NQNEKRVKDLWLGDSRCWDANRVEQVYGRDWGDKICNIPIGDVGQADRMIWFHNPHGFFT 1422

Query: 239  NKSAYLFMLRNRLDLSNPYEGWKCLWLLPVSPRIKIFNCKLVHNRLVTSAYLAS 400
            +KSAY ++L   +        WK +W L   P+I++F  ++ H  L T+  +AS
Sbjct: 1423 SKSAYSWLLLKEIGYGPHRFFWKAIWKLDTLPKIRVFTWRVGHEILPTNCKIAS 1476


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