BLASTX nr result

ID: Cheilocostus21_contig00062607 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00062607
         (2011 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80831.1| hypothetical protein VITISV_002503 [Vitis vinifera]    62   5e-06

>emb|CAN80831.1| hypothetical protein VITISV_002503 [Vitis vinifera]
          Length = 977

 Score = 61.6 bits (148), Expect = 5e-06
 Identities = 53/166 (31%), Positives = 83/166 (50%), Gaps = 4/166 (2%)
 Frame = -1

Query: 1987 SKSMVFDAFKIFYREIRKTI*CF*KNLLHIDN--KYMKSLFTFFYQSQDVIH*IACLYMF 1814
            S+S +F  F+ FY EI+       + +L  DN  +Y  + FT F  +  +IH  +C Y  
Sbjct: 423  SRSELFSIFQKFYAEIQTQFNISIR-VLRSDNAREYFSAPFTSFMSNHGIIHQSSCAYTP 481

Query: 1813 *KKGSV*QKNYQL-NLARTVVFHMHVPKSILINIILSVYNLINQGSSSIFH-R*SSTFVA 1640
             + G   +KN  L    RT++ H HVP     + +L+V  LIN+  SS+ H +   +F+ 
Sbjct: 482  QQNGVAERKNRHLVETTRTILLHSHVPFRFWGDAVLTVCYLINRMPSSVLHDQIPQSFLF 541

Query: 1639 LCFFSYFVCFPFQVFCLFFGPT*QI*THLILCIFFGYSHSQRAHRC 1502
                 YF+  P +V    FG T  +    + C+F GYS  Q+ +RC
Sbjct: 542  PDQPLYFL--PPRV----FGCTCFLSAKGMKCLFLGYSRLQKGYRC 581


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