BLASTX nr result

ID: Cheilocostus21_contig00062302 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00062302
         (688 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020258560.1| uncharacterized protein LOC109834964 [Aspara...    49   2e-07
gb|KYP52900.1| Retrovirus-related Pol polyprotein from transposo...    48   2e-06
emb|CAN71812.1| hypothetical protein VITISV_037409 [Vitis vinifera]    49   3e-06
gb|KYP41064.1| Retrovirus-related Pol polyprotein from transposo...    47   7e-06
ref|XP_012574204.1| PREDICTED: uncharacterized protein LOC105852...    48   7e-06

>ref|XP_020258560.1| uncharacterized protein LOC109834964 [Asparagus officinalis]
          Length = 1038

 Score = 48.5 bits (114), Expect(2) = 2e-07
 Identities = 22/36 (61%), Positives = 26/36 (72%)
 Frame = +1

Query: 208 YKAKLVVKGFTQTYDVNYFEIFPLIVMLNYVRLLFS 315
           YKA+LV KG+TQ Y VNY E F  +  LN +RLLFS
Sbjct: 390 YKARLVAKGYTQIYGVNYLETFSPVACLNSIRLLFS 425



 Score = 34.7 bits (78), Expect(2) = 2e-07
 Identities = 21/40 (52%), Positives = 23/40 (57%)
 Frame = +3

Query: 24  RILLLSLSDRSNPISPQEGLLSSQWKQAMDDEMLTLKSWG 143
           R   LSLS  S P S +E +L   WKQAMD EM  L S G
Sbjct: 318 RQFALSLSSISLPKSYEEAMLVPAWKQAMDKEMDALISRG 357


>gb|KYP52900.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 737

 Score = 47.8 bits (112), Expect(2) = 2e-06
 Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 10/57 (17%)
 Frame = +1

Query: 175 KGVVC*WLYNY----------YKAKLVVKGFTQTYDVNYFEIFPLIVMLNYVRLLFS 315
           K V C W+Y            YKA+LV KGFTQTY V+Y E F  +  +N VR++ S
Sbjct: 265 KPVGCKWVYTIKYKADGSIERYKARLVAKGFTQTYGVDYMETFAPVAKMNTVRVILS 321



 Score = 32.3 bits (72), Expect(2) = 2e-06
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +3

Query: 24  RILLLSLSDRSNPISPQEGLLSSQWKQAMDDEMLTLK 134
           +  L SL+  + P S  E L   +WKQAMD EM  L+
Sbjct: 214 KAFLTSLNTTTTPTSLSEALSDKKWKQAMDVEMEALE 250


>emb|CAN71812.1| hypothetical protein VITISV_037409 [Vitis vinifera]
          Length = 621

 Score = 48.5 bits (114), Expect(2) = 3e-06
 Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 10/57 (17%)
 Frame = +1

Query: 175 KGVVC*WLYNY----------YKAKLVVKGFTQTYDVNYFEIFPLIVMLNYVRLLFS 315
           K V C W+Y            YKA+LV KG+TQTY ++Y E F L+  +N VR+L S
Sbjct: 188 KPVGCKWVYTVKYRADGSIERYKARLVAKGYTQTYGIDYQETFALVAKMNTVRVLLS 244



 Score = 30.8 bits (68), Expect(2) = 3e-06
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = +3

Query: 24  RILLLSLSDRSNPISPQEGLLSSQWKQAMDDEMLTL---KSWGYV 149
           R  L+SL+  S P +  + L   +WKQAM+ EM  L   K+W  V
Sbjct: 137 RAFLVSLNTISIPTTVSKALTDEKWKQAMNVEMEALEKNKTWELV 181


>gb|KYP41064.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1374

 Score = 47.4 bits (111), Expect(2) = 7e-06
 Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 10/57 (17%)
 Frame = +1

Query: 175  KGVVC*WLY----------NYYKAKLVVKGFTQTYDVNYFEIFPLIVMLNYVRLLFS 315
            K V C W+Y            YKA+LV KGFTQTY V+Y E F  +  +N VR++ S
Sbjct: 902  KPVGCKWVYAVKYRANGTIERYKARLVAKGFTQTYGVDYLETFAPVAKMNTVRVILS 958



 Score = 30.8 bits (68), Expect(2) = 7e-06
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = +3

Query: 24  RILLLSLSDRSNPISPQEGLLSSQWKQAMDDEMLTL---KSWGYV 149
           +  L +L+    P S  E L  S+WK AMD EM  L   ++W  V
Sbjct: 851 KTFLTNLNSTQTPSSVSEALSDSKWKHAMDVEMEALNKNRTWELV 895


>ref|XP_012574204.1| PREDICTED: uncharacterized protein LOC105852603 [Cicer arietinum]
          Length = 1075

 Score = 47.8 bits (112), Expect(2) = 7e-06
 Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 10/57 (17%)
 Frame = +1

Query: 175 KGVVC*WLYNY----------YKAKLVVKGFTQTYDVNYFEIFPLIVMLNYVRLLFS 315
           K V C W+Y            YKA+LV KGFTQTY V+Y E F  +  +N VR++ S
Sbjct: 660 KPVGCKWVYTIKYRADGTIERYKARLVAKGFTQTYGVDYLETFAPVAKMNTVRVILS 716



 Score = 30.4 bits (67), Expect(2) = 7e-06
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = +3

Query: 24  RILLLSLSDRSNPISPQEGLLSSQWKQAMDDEMLTL---KSWGYV 149
           +  L +L+    P S  E L   +WKQAMD EM  L   ++W  V
Sbjct: 609 KTFLTNLNSTHTPSSVSEALSDRKWKQAMDVEMEALNKNRTWKLV 653


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