BLASTX nr result
ID: Cheilocostus21_contig00062108
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00062108
(485 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PKA49422.1| Retrovirus-related Pol polyprotein from transposo... 171 4e-48
gb|PKA60107.1| Retrovirus-related Pol polyprotein from transposo... 171 1e-46
gb|PKA60460.1| Retrovirus-related Pol polyprotein from transposo... 139 2e-39
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 140 2e-35
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] >gi... 139 4e-35
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group... 137 1e-34
gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subc... 134 2e-33
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 134 2e-33
gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subc... 134 2e-33
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 134 3e-33
gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposo... 126 4e-33
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 133 6e-33
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 133 6e-33
gb|AAU90262.1| integrase core domain containing protein [Oryza s... 132 8e-33
gb|PKU77855.1| Retrovirus-related Pol polyprotein from transposo... 125 1e-32
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group] 132 1e-32
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 132 1e-32
gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposo... 128 1e-32
gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposo... 128 1e-32
gb|OMO61326.1| Integrase, catalytic core [Corchorus capsularis] 131 2e-32
>gb|PKA49422.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
Length = 494
Score = 171 bits (434), Expect = 4e-48
Identities = 84/138 (60%), Positives = 100/138 (72%), Gaps = 3/138 (2%)
Frame = -1
Query: 410 HLLIIIANILGF---YLMKCKSDLLDVFCHFQTHVERLFN*RILSVHSNWGGEYQALHRH 240
+ +I + N F + MK KSDL+D+F +FQ HVER FN +I S HS+WGGEYQALHRH
Sbjct: 128 YYVIFVDNFSKFTWLFPMKRKSDLIDIFLNFQNHVERFFNCKIRSFHSDWGGEYQALHRH 187
Query: 239 LIKSGIEHRVSCPHTPEQNGSAE*KHHHIVETALALLHHASVPVKHWDDAVSTVVYLINR 60
L SGI H+VSCPHTPEQN SAE KH HI+ET LALL HAS P K WD A T VYLINR
Sbjct: 188 LYSSGIIHQVSCPHTPEQNDSAERKHRHIIETTLALLQHASAPQKFWDAAAQTAVYLINR 247
Query: 59 ISTPLLSNKTPFEILHQR 6
+ TP+L + TP + L+ R
Sbjct: 248 LPTPILHHITPLQKLYGR 265
>gb|PKA60107.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
Length = 696
Score = 171 bits (432), Expect = 1e-46
Identities = 81/121 (66%), Positives = 92/121 (76%)
Frame = -1
Query: 368 MKCKSDLLDVFCHFQTHVERLFN*RILSVHSNWGGEYQALHRHLIKSGIEHRVSCPHTPE 189
+K KSDL+D+F FQ HVER FN +I S HS+WGGEYQALHRHL SGI HRVSCPHTPE
Sbjct: 550 IKRKSDLVDIFLSFQKHVERFFNCKIRSFHSDWGGEYQALHRHLNSSGITHRVSCPHTPE 609
Query: 188 QNGSAE*KHHHIVETALALLHHASVPVKHWDDAVSTVVYLINRISTPLLSNKTPFEILHQ 9
QNGSAE KH HI+ET LA L HAS P K WD A T VYLINR+ TP+L + TP + L+
Sbjct: 610 QNGSAERKHRHIIETTLAFLQHASAPQKFWDAAAQTAVYLINRLPTPILHHITPLQKLYG 669
Query: 8 R 6
R
Sbjct: 670 R 670
>gb|PKA60460.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Apostasia shenzhenica]
Length = 147
Score = 139 bits (351), Expect = 2e-39
Identities = 66/88 (75%), Positives = 71/88 (80%)
Frame = -1
Query: 368 MKCKSDLLDVFCHFQTHVERLFN*RILSVHSNWGGEYQALHRHLIKSGIEHRVSCPHTPE 189
MK KSDL+D+F FQ HVER FN +I S HS+WGGEYQALHRHL SGI HRVSCPHTPE
Sbjct: 59 MKRKSDLVDIFLSFQKHVERFFNCKIRSFHSDWGGEYQALHRHLNSSGITHRVSCPHTPE 118
Query: 188 QNGSAE*KHHHIVETALALLHHASVPVK 105
QNGSAE KH HI+ET LALL HAS P K
Sbjct: 119 QNGSAERKHRHIIETTLALLQHASAPQK 146
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 140 bits (353), Expect = 2e-35
Identities = 67/136 (49%), Positives = 93/136 (68%), Gaps = 1/136 (0%)
Frame = -1
Query: 410 HLLIIIANILGFYLMKCKSDLLDVFCHFQTHVERLFN*RILSVHSNWGGEYQALHRHLIK 231
H + + Y++K KS+ VF HF++ VE +I +V S+WGGEY++ ++L
Sbjct: 587 HFIDAYSRFTWIYMLKHKSEAFQVFLHFKSQVELQLGHKIKAVQSDWGGEYRSFTQYLTS 646
Query: 230 SGIEHRVSCPHTPEQNGSAE*KHHHIVETALALLHHASVPVKHWDDAVSTVVYLINRIST 51
+GI HR+SCP+T EQNG AE KH HIVE +ALL AS+P K+WD+A T VYLINR+ T
Sbjct: 647 NGIIHRISCPYTHEQNGLAERKHRHIVEHGIALLAQASLPFKYWDEAFRTSVYLINRLPT 706
Query: 50 PLLSNKTPFEIL-HQR 6
P+L NK+P E+L HQ+
Sbjct: 707 PVLKNKSPLEVLFHQK 722
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gb|AAU44069.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1447
Score = 139 bits (350), Expect = 4e-35
Identities = 68/124 (54%), Positives = 85/124 (68%)
Frame = -1
Query: 374 YLMKCKSDLLDVFCHFQTHVERLFN*RILSVHSNWGGEYQALHRHLIKSGIEHRVSCPHT 195
YL+K KS+++ F FQ VERLFN +I+++ S+WGGEY+ LH K GI H VSCPHT
Sbjct: 550 YLIKHKSEVIQKFHEFQALVERLFNRKIIAMQSDWGGEYEKLHSFFTKIGITHHVSCPHT 609
Query: 194 PEQNGSAE*KHHHIVETALALLHHASVPVKHWDDAVSTVVYLINRISTPLLSNKTPFEIL 15
+QNGSAE KH HIVE L LL ++S+P+K WD+A VYLINR T LL TP E L
Sbjct: 610 HQQNGSAERKHRHIVEVGLTLLAYSSMPLKFWDEAFQAAVYLINRTPTKLLQFLTPLEHL 669
Query: 14 HQRT 3
+T
Sbjct: 670 FNQT 673
>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
gb|AAU44112.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1256
Score = 137 bits (346), Expect = 1e-34
Identities = 66/124 (53%), Positives = 87/124 (70%)
Frame = -1
Query: 374 YLMKCKSDLLDVFCHFQTHVERLFN*RILSVHSNWGGEYQALHRHLIKSGIEHRVSCPHT 195
Y +K KS++ F FQ VER+FN +I+S+ ++WGGEYQ L+ K GI H VSCPHT
Sbjct: 379 YFLKYKSEVFQKFQEFQCLVERMFNRKIISMQTDWGGEYQKLNTFFNKIGITHHVSCPHT 438
Query: 194 PEQNGSAE*KHHHIVETALALLHHASVPVKHWDDAVSTVVYLINRISTPLLSNKTPFEIL 15
+QNGSAE KH HIVE L+LL HAS+P+K WD+A + VYLINR+ T +L +P E L
Sbjct: 439 HQQNGSAERKHRHIVEVGLSLLAHASLPLKFWDEAYQSGVYLINRMPTKVLGYSSPLECL 498
Query: 14 HQRT 3
++T
Sbjct: 499 FKQT 502
>gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1016
Score = 134 bits (338), Expect = 2e-33
Identities = 64/120 (53%), Positives = 81/120 (67%)
Frame = -1
Query: 374 YLMKCKSDLLDVFCHFQTHVERLFN*RILSVHSNWGGEYQALHRHLIKSGIEHRVSCPHT 195
YL+K KS++ F FQ VERLFN +I+S+ ++WGGEY+ LH K GI H VSCP+
Sbjct: 161 YLLKNKSEVFSKFHEFQQRVERLFNRKIISMQTDWGGEYEKLHSFFTKIGISHHVSCPYA 220
Query: 194 PEQNGSAE*KHHHIVETALALLHHASVPVKHWDDAVSTVVYLINRISTPLLSNKTPFEIL 15
+QNGSAE KH HIVE LALL HASVP+K WD+A YLINR+ + ++ P E L
Sbjct: 221 HQQNGSAERKHRHIVEVGLALLAHASVPLKFWDEAFLAATYLINRLPSKVIQYSAPLERL 280
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 134 bits (338), Expect = 2e-33
Identities = 61/120 (50%), Positives = 85/120 (70%)
Frame = -1
Query: 374 YLMKCKSDLLDVFCHFQTHVERLFN*RILSVHSNWGGEYQALHRHLIKSGIEHRVSCPHT 195
YL+K KS++ + F FQ VER+F+ +I+++ ++WGGEYQ L+ K GI+H VSCPHT
Sbjct: 550 YLLKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWGGEYQKLNSFFAKIGIDHHVSCPHT 609
Query: 194 PEQNGSAE*KHHHIVETALALLHHASVPVKHWDDAVSTVVYLINRISTPLLSNKTPFEIL 15
+QNGSAE KH HI+E L+LL +AS+P+K WD+A YLINR+ + + N TP E L
Sbjct: 610 HQQNGSAERKHRHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRVPSKTIQNSTPLEKL 669
>gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1145
Score = 134 bits (337), Expect = 2e-33
Identities = 63/124 (50%), Positives = 86/124 (69%), Gaps = 1/124 (0%)
Frame = -1
Query: 374 YLMKCKSDLLDVFCHFQTHVERLFN*RILSVHSNWGGEYQALHRHLIKSGIEHRVSCPHT 195
YL++ KS + + F FQ +ERLF+ +IL++ ++WGGEY+AL+ K GI H VSCPHT
Sbjct: 420 YLLQHKSQVFEKFQEFQVMIERLFDRKILAMQTDWGGEYRALNSFFSKIGIVHHVSCPHT 479
Query: 194 PEQNGSAE*KHHHIVETALALLHHASVPVKHWDDAVSTVVYLINRISTPLLSNKTPFE-I 18
+QNGSAE KH HIVE L+LL HA +P+K WD+A YLINR+ + ++ N TP E
Sbjct: 480 HQQNGSAERKHRHIVEVGLSLLSHAHMPLKFWDEAFQAATYLINRVPSRVIQNTTPLEKF 539
Query: 17 LHQR 6
HQ+
Sbjct: 540 FHQK 543
>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
gb|ABF96679.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1437
Score = 134 bits (336), Expect = 3e-33
Identities = 65/120 (54%), Positives = 86/120 (71%)
Frame = -1
Query: 374 YLMKCKSDLLDVFCHFQTHVERLFN*RILSVHSNWGGEYQALHRHLIKSGIEHRVSCPHT 195
YL+K KS++ D F FQ+ VERLFN +I+++ ++WGGEYQ LH K GI H VSCPHT
Sbjct: 548 YLLKYKSEVFDKFHEFQSLVERLFNRKIVAMQTDWGGEYQKLHSFFNKVGITHHVSCPHT 607
Query: 194 PEQNGSAE*KHHHIVETALALLHHASVPVKHWDDAVSTVVYLINRISTPLLSNKTPFEIL 15
+QNGSAE KH HIVE LALL ++S+P+K W +A + VYLINR + +L + +P E L
Sbjct: 608 HQQNGSAERKHRHIVEVGLALLAYSSMPLKFWGEAFLSAVYLINRTPSRVLHDVSPLERL 667
>gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1268
Score = 126 bits (316), Expect(2) = 4e-33
Identities = 62/124 (50%), Positives = 79/124 (63%)
Frame = -1
Query: 374 YLMKCKSDLLDVFCHFQTHVERLFN*RILSVHSNWGGEYQALHRHLIKSGIEHRVSCPHT 195
Y +K KSD L VF F+ VE N +I S+ S+WGGEY++ L GI HR+ CPHT
Sbjct: 512 YPLKSKSDTLSVFQQFKAMVELQLNTKIKSIQSDWGGEYRSFTAFLATHGITHRLICPHT 571
Query: 194 PEQNGSAE*KHHHIVETALALLHHASVPVKHWDDAVSTVVYLINRISTPLLSNKTPFEIL 15
QNG E KH HIV+ + LLHHAS+P+ WD A ST VYLINR+ T L+ PF +L
Sbjct: 572 HHQNGVVERKHRHIVDIGITLLHHASLPLTFWDYAFSTAVYLINRLPTASLNFDIPFTVL 631
Query: 14 HQRT 3
++T
Sbjct: 632 FKQT 635
Score = 43.1 bits (100), Expect(2) = 4e-33
Identities = 16/33 (48%), Positives = 26/33 (78%)
Frame = -3
Query: 474 LFIHMSSPAPVLSHNGFSHYVSFIDHYSKYTWL 376
+F + P+ V+SH+G+ +YVSFID +SK+TW+
Sbjct: 479 IFTDLWGPSHVVSHSGYVYYVSFIDAFSKFTWI 511
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 133 bits (334), Expect = 6e-33
Identities = 61/120 (50%), Positives = 85/120 (70%)
Frame = -1
Query: 374 YLMKCKSDLLDVFCHFQTHVERLFN*RILSVHSNWGGEYQALHRHLIKSGIEHRVSCPHT 195
YL+K KS++ + F FQ VER+F+ +I+++ ++WGGEYQ L+ + GI+H VSCPHT
Sbjct: 553 YLLKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWGGEYQKLNSFFAQIGIDHHVSCPHT 612
Query: 194 PEQNGSAE*KHHHIVETALALLHHASVPVKHWDDAVSTVVYLINRISTPLLSNKTPFEIL 15
+QNGSAE KH HI+E L+LL +AS+P+K WD+A YLINRI + + N TP E L
Sbjct: 613 HQQNGSAERKHKHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNSTPLEKL 672
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 133 bits (334), Expect = 6e-33
Identities = 61/120 (50%), Positives = 85/120 (70%)
Frame = -1
Query: 374 YLMKCKSDLLDVFCHFQTHVERLFN*RILSVHSNWGGEYQALHRHLIKSGIEHRVSCPHT 195
YL+K KS++ + F FQ VER+F+ +I+++ ++WGGEYQ L+ + GI+H VSCPHT
Sbjct: 553 YLLKYKSEVFEKFKEFQALVERMFDRKIIAMQTDWGGEYQKLNSFFAQIGIDHHVSCPHT 612
Query: 194 PEQNGSAE*KHHHIVETALALLHHASVPVKHWDDAVSTVVYLINRISTPLLSNKTPFEIL 15
+QNGSAE KH HI+E L+LL +AS+P+K WD+A YLINRI + + N TP E L
Sbjct: 613 HQQNGSAERKHKHIIEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNSTPLEKL 672
>gb|AAU90262.1| integrase core domain containing protein [Oryza sativa Japonica
Group]
gb|ABF97857.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 1021
Score = 132 bits (333), Expect = 8e-33
Identities = 65/124 (52%), Positives = 87/124 (70%), Gaps = 1/124 (0%)
Frame = -1
Query: 374 YLMKCKSDLLDVFCHFQTHVERLFN*RILSVHSNWGGEYQALHRHLIKSGIEHRVSCPHT 195
YL+K KS++L F FQ VERLFN +I+++ S+WGGEY+ L+ K GI H VSCP+
Sbjct: 465 YLLKKKSEVLQKFSEFQQLVERLFNRKIIAMQSDWGGEYEKLNAIFTKIGITHHVSCPYA 524
Query: 194 PEQNGSAE*KHHHIVETALALLHHASVPVKHWDDAVSTVVYLINRISTPLLSNKTPFE-I 18
+QNGSAE KH HIVE L+LL HAS+P+K WD+A T YLINR + ++ TP E +
Sbjct: 525 HQQNGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFLTATYLINRTPSKVIQYSTPLERL 584
Query: 17 LHQR 6
L+Q+
Sbjct: 585 LNQK 588
>gb|PKU77855.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 1360
Score = 125 bits (313), Expect(2) = 1e-32
Identities = 61/123 (49%), Positives = 83/123 (67%), Gaps = 2/123 (1%)
Frame = -1
Query: 368 MKCKSDLLDVFCHFQTHVERLFN*RILSVHSNWGGEYQALH--RHLIKSGIEHRVSCPHT 195
+K KS++ D+F F+T++E L + +I + ++ GGEY L GI H+VSCP+T
Sbjct: 545 IKQKSEVTDIFLSFKTYIENLLSTKIKCIRTDGGGEYMCKRFTNLLNNYGISHQVSCPYT 604
Query: 194 PEQNGSAE*KHHHIVETALALLHHASVPVKHWDDAVSTVVYLINRISTPLLSNKTPFEIL 15
PEQNG AE KH H++ET LL+ ASVP W DAV T YLINR+ +P SNK+P+E+L
Sbjct: 605 PEQNGVAERKHRHLLETTRTLLYTASVPTSFWPDAVLTATYLINRMPSPNTSNKSPYELL 664
Query: 14 HQR 6
HQR
Sbjct: 665 HQR 667
Score = 42.7 bits (99), Expect(2) = 1e-32
Identities = 16/26 (61%), Positives = 23/26 (88%)
Frame = -3
Query: 453 PAPVLSHNGFSHYVSFIDHYSKYTWL 376
PAP +S++GF +YVSFID Y+++TWL
Sbjct: 517 PAPQISNSGFLYYVSFIDDYTRFTWL 542
>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1210
Score = 132 bits (332), Expect = 1e-32
Identities = 63/124 (50%), Positives = 85/124 (68%), Gaps = 1/124 (0%)
Frame = -1
Query: 374 YLMKCKSDLLDVFCHFQTHVERLFN*RILSVHSNWGGEYQALHRHLIKSGIEHRVSCPHT 195
YL+K KS++ F FQ VER+F +I+++ ++WGGEY+ LH K GI H VSCPHT
Sbjct: 541 YLLKQKSEVFHKFHEFQQLVERIFYRKIIAMQTDWGGEYEKLHDFFTKIGISHHVSCPHT 600
Query: 194 PEQNGSAE*KHHHIVETALALLHHASVPVKHWDDAVSTVVYLINRISTPLLSNKTPFE-I 18
+QNGSAE KH HIVE L+LL HAS+P+K WD+A YLINR + ++ +TP E +
Sbjct: 601 HQQNGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFIAATYLINRTPSKVIQYETPLEHL 660
Query: 17 LHQR 6
HQ+
Sbjct: 661 FHQK 664
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 132 bits (332), Expect = 1e-32
Identities = 63/123 (51%), Positives = 86/123 (69%)
Frame = -1
Query: 374 YLMKCKSDLLDVFCHFQTHVERLFN*RILSVHSNWGGEYQALHRHLIKSGIEHRVSCPHT 195
YL++ KS + D F FQ VER F+ +IL++ ++WGGEYQ+L+ K GI H VSCPHT
Sbjct: 544 YLIQHKSQVFDKFQEFQVMVERQFDRKILAMQTDWGGEYQSLNSFFSKIGIVHHVSCPHT 603
Query: 194 PEQNGSAE*KHHHIVETALALLHHASVPVKHWDDAVSTVVYLINRISTPLLSNKTPFEIL 15
+QNGSAE KH HIVE L+LL HAS+P+K WD+A YLINR+ + ++ N +P E L
Sbjct: 604 HQQNGSAERKHRHIVEIGLSLLSHASMPLKFWDEAFQVATYLINRVPSRVIHNISPLEKL 663
Query: 14 HQR 6
++
Sbjct: 664 FKQ 666
>gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1358
Score = 128 bits (322), Expect(2) = 1e-32
Identities = 63/124 (50%), Positives = 80/124 (64%)
Frame = -1
Query: 374 YLMKCKSDLLDVFCHFQTHVERLFN*RILSVHSNWGGEYQALHRHLIKSGIEHRVSCPHT 195
Y +K K++ L VF F+ E FN +I SV S+WGGEY+A L +GI+HRV CPHT
Sbjct: 535 YPLKSKAETLSVFQQFKAMAELQFNTKIKSVQSDWGGEYRAFTSFLATNGIQHRVICPHT 594
Query: 194 PEQNGSAE*KHHHIVETALALLHHASVPVKHWDDAVSTVVYLINRISTPLLSNKTPFEIL 15
QNG E KH HIVE L LLHHAS+P+K WD A +T VYLINR+ + L+ PF L
Sbjct: 595 HHQNGVVERKHRHIVEIGLTLLHHASLPLKFWDFAFTTAVYLINRLPSAALNFNVPFTTL 654
Query: 14 HQRT 3
++
Sbjct: 655 FNKS 658
Score = 38.9 bits (89), Expect(2) = 1e-32
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = -3
Query: 474 LFIHMSSPAPVLSHNGFSHYVSFIDHYSKYTWL 376
+F + P+ + S +G+ +YV+FID +SKYTW+
Sbjct: 502 IFTDLWGPSHITSFSGYLYYVAFIDAFSKYTWI 534
>gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 1279
Score = 128 bits (322), Expect(2) = 1e-32
Identities = 63/124 (50%), Positives = 80/124 (64%)
Frame = -1
Query: 374 YLMKCKSDLLDVFCHFQTHVERLFN*RILSVHSNWGGEYQALHRHLIKSGIEHRVSCPHT 195
Y +K K++ L VF F+ E FN +I SV S+WGGEY+A L +GI+HRV CPHT
Sbjct: 456 YPLKSKAETLSVFQQFKAMAELQFNTKIKSVQSDWGGEYRAFTSFLATNGIQHRVICPHT 515
Query: 194 PEQNGSAE*KHHHIVETALALLHHASVPVKHWDDAVSTVVYLINRISTPLLSNKTPFEIL 15
QNG E KH HIVE L LLHHAS+P+K WD A +T VYLINR+ + L+ PF L
Sbjct: 516 HHQNGVVERKHRHIVEIGLTLLHHASLPLKFWDFAFTTAVYLINRLPSAALNFNVPFTTL 575
Query: 14 HQRT 3
++
Sbjct: 576 FNKS 579
Score = 38.9 bits (89), Expect(2) = 1e-32
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = -3
Query: 474 LFIHMSSPAPVLSHNGFSHYVSFIDHYSKYTWL 376
+F + P+ + S +G+ +YV+FID +SKYTW+
Sbjct: 423 IFTDLWGPSHITSFSGYLYYVAFIDAFSKYTWI 455
>gb|OMO61326.1| Integrase, catalytic core [Corchorus capsularis]
Length = 818
Score = 131 bits (330), Expect = 2e-32
Identities = 60/103 (58%), Positives = 79/103 (76%)
Frame = -1
Query: 317 VERLFN*RILSVHSNWGGEYQALHRHLIKSGIEHRVSCPHTPEQNGSAE*KHHHIVETAL 138
VE+ F+ I S ++WGGEYQAL ++L+++GI R SCPHTPEQNG AE KH HIVET L
Sbjct: 131 VEKFFDKPIKSFQADWGGEYQALTQYLVQNGINQRNSCPHTPEQNGCAERKHRHIVETGL 190
Query: 137 ALLHHASVPVKHWDDAVSTVVYLINRISTPLLSNKTPFEILHQ 9
AL++HASVP+K+W A VY+INR+ TP L +K+P+EI+ Q
Sbjct: 191 ALMYHASVPLKYWSFAFDAAVYIINRLLTPKLKHKSPYEIIFQ 233