BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00062043
         (608 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PRQ52491.1| putative RNA-directed DNA polymerase [Rosa chinen...    60   5e-07
ref|XP_020532292.1| uncharacterized protein LOC110008568 [Ambore...    59   6e-07
gb|PRQ34018.1| putative RNA-directed DNA polymerase [Rosa chinen...    59   9e-07

>gb|PRQ52491.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1377

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
 Frame = +1

Query: 160  QSSTSGLCT*VGGNLII*SKNKY----CS*I-SQI*FMKNTNCELTMFQTFVGDLGFTCT 324
            + ST+G CT +GGNL+     K     CS   ++   M +T CEL   +T +GDLG  CT
Sbjct: 1281 RKSTTGYCTFIGGNLVTWKSKKQTVVACSSAEAEYRAMASTACELIWLKTLLGDLGIVCT 1340

Query: 325  KNIIMNCDNHATIHISSYP 381
              I ++CDN A +HI++ P
Sbjct: 1341 LPICLHCDNQAAMHIAANP 1359


>ref|XP_020532292.1| uncharacterized protein LOC110008568 [Amborella trichopoda]
          Length = 317

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 39/117 (33%), Positives = 53/117 (45%), Gaps = 5/117 (4%)
 Frame = +1

Query: 46  LVYTKPQVEFLKSCSTNSSFSKILQETCIF*LCKEFI*QSSTSGLCT*VGGNLII*SKNK 225
           L  TKP + ++ S   N    K                  ST+GLC  VGGN++     K
Sbjct: 154 LTITKPDITYVVSMDVNPLDKK------------------STTGLCAFVGGNMVTWKSKK 195

Query: 226 Y-----CS*ISQI*FMKNTNCELTMFQTFVGDLGFTCTKNIIMNCDNHATIHISSYP 381
                  S  ++   M +T CEL   ++F+ DLGF   K I + CDN A IHI+ YP
Sbjct: 196 QNVVTRSSAEAEYRAMASTTCELIWLKSFLNDLGFKSAKPIPLFCDNQAAIHIAIYP 252


>gb|PRQ34018.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 859

 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
 Frame = +1

Query: 160 QSSTSGLCT*VGGNLII*SKNK-----YCS*ISQI*FMKNTNCELTMFQTFVGDLGFTCT 324
           + ST+G CT +GGNL+     K     + S  ++   M +  CEL   +T +GDLG  CT
Sbjct: 716 RKSTTGYCTFIGGNLVTWKSKKQTVVAHSSAEAEYRAMASITCELIWLKTLLGDLGIVCT 775

Query: 325 KNIIMNCDNHATIHISSYP 381
             I ++CDN A +HI++ P
Sbjct: 776 MPISLHCDNQAAMHIAANP 794