BLASTX nr result
ID: Cheilocostus21_contig00061851
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00061851
(692 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ANK58548.1| polyprotein [Fig badnavirus 1] 229 2e-65
gb|ANK58542.1| polyprotein [Fig badnavirus 1] 229 2e-65
gb|ANK58539.1| polyprotein [Fig badnavirus 1] 229 2e-65
gb|ANK58536.1| polyprotein [Fig badnavirus 1] 228 6e-65
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] >gi|333493962... 228 6e-65
gb|ANK58545.1| polyprotein [Fig badnavirus 1] 226 2e-64
gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration... 218 1e-61
ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discolor... 211 3e-59
gb|ATV81254.1| polyprotein [Grapevine badnavirus 1] 207 9e-58
gb|ASM61279.1| polyprotein, partial [Cacao swollen shoot virus] 180 1e-52
ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]... 192 1e-52
gb|AIK01824.1| ORF3 [Piper yellow mottle virus] 190 7e-52
gb|AIK01820.1| ORF3 [Piper yellow mottle virus] 189 1e-51
gb|AIK01816.1| ORF3 [Piper yellow mottle virus] 189 1e-51
ref|YP_008567619.1| ORF3 [Piper yellow mottle virus] >gi|5403574... 189 1e-51
gb|ASM61278.1| polyprotein, partial [Cacao swollen shoot virus] 176 5e-51
gb|ASM61283.1| polyprotein, partial [Cacao swollen shoot virus] 174 3e-50
gb|ASM61288.1| polyprotein, partial [Cacao swollen shoot virus] 174 3e-50
gb|ASM61284.1| polyprotein, partial [Cacao swollen shoot virus] 174 3e-50
gb|ASM61281.1| polyprotein, partial [Cacao swollen shoot virus] 174 3e-50
>gb|ANK58548.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 229 bits (584), Expect = 2e-65
Identities = 124/205 (60%), Positives = 152/205 (74%), Gaps = 4/205 (1%)
Frame = -2
Query: 607 FINPVASEGGGEEELQLIAAGMEYPSLRGLTQEIETPQNDDQQIYSTSTVISPYRPPKDT 428
++NP SEGGG+++ L + M+YP ++IE ++ STS V SPYRPP+D
Sbjct: 462 YLNPF-SEGGGKDD-HLNSEEMDYPQRM---KKIE-------KLLSTSEVTSPYRPPEDA 509
Query: 427 AMGPPGYTPARADPG----PSRLPPIHEQQLSRTRFKGGFNNEMWTLPFAQQQGGAMFVI 260
AMG P Y PAR PG S PP + +RTRFKGG+N+EMWTLP AQQ+ GAMFVI
Sbjct: 510 AMGRPSYPPARTIPGGGASSSAEPPRFDA--ARTRFKGGYNDEMWTLPSAQQKNGAMFVI 567
Query: 259 PKQLGLFDDTFFRWESITKNHVATQAFTDPKD*IEYIENLLGEIEKISWIP*RMSYPTEY 80
P+QLGLF+D F RWES+TKNHVATQ FTD +D IEY+ENLLGEIEK+ WI RM+Y TEY
Sbjct: 568 PEQLGLFNDAFSRWESVTKNHVATQGFTDTRDKIEYMENLLGEIEKLIWIQWRMTYATEY 627
Query: 79 EALVNIGDGREGTQNILSQIKRVFS 5
EALV IG+GR+GTQNILSQ++RVFS
Sbjct: 628 EALVAIGEGRDGTQNILSQMRRVFS 652
>gb|ANK58542.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 229 bits (584), Expect = 2e-65
Identities = 124/205 (60%), Positives = 152/205 (74%), Gaps = 4/205 (1%)
Frame = -2
Query: 607 FINPVASEGGGEEELQLIAAGMEYPSLRGLTQEIETPQNDDQQIYSTSTVISPYRPPKDT 428
++NP SEGGG+++ L + M+YP ++IE ++ STS V SPYRPP+D
Sbjct: 462 YLNPF-SEGGGKDD-HLNSEEMDYPQRM---KKIE-------KLLSTSEVTSPYRPPEDA 509
Query: 427 AMGPPGYTPARADPG----PSRLPPIHEQQLSRTRFKGGFNNEMWTLPFAQQQGGAMFVI 260
AMG P Y PAR PG S PP + +RTRFKGG+N+EMWTLP AQQ+ GAMFVI
Sbjct: 510 AMGRPSYPPARTIPGGGASSSAEPPRFDA--ARTRFKGGYNDEMWTLPSAQQKNGAMFVI 567
Query: 259 PKQLGLFDDTFFRWESITKNHVATQAFTDPKD*IEYIENLLGEIEKISWIP*RMSYPTEY 80
P+QLGLF+D F RWES+TKNHVATQ FTD +D IEY+ENLLGEIEK+ WI RM+Y TEY
Sbjct: 568 PEQLGLFNDAFSRWESVTKNHVATQGFTDTRDKIEYMENLLGEIEKLIWIQWRMTYATEY 627
Query: 79 EALVNIGDGREGTQNILSQIKRVFS 5
EALV IG+GR+GTQNILSQ++RVFS
Sbjct: 628 EALVAIGEGRDGTQNILSQMRRVFS 652
>gb|ANK58539.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 229 bits (584), Expect = 2e-65
Identities = 124/205 (60%), Positives = 152/205 (74%), Gaps = 4/205 (1%)
Frame = -2
Query: 607 FINPVASEGGGEEELQLIAAGMEYPSLRGLTQEIETPQNDDQQIYSTSTVISPYRPPKDT 428
++NP SEGGG+++ L + M+YP ++IE ++ STS V SPYRPP+D
Sbjct: 462 YLNPF-SEGGGKDD-HLNSEEMDYPQRM---KKIE-------KLLSTSEVTSPYRPPEDA 509
Query: 427 AMGPPGYTPARADPG----PSRLPPIHEQQLSRTRFKGGFNNEMWTLPFAQQQGGAMFVI 260
AMG P Y PAR PG S PP + +RTRFKGG+N+EMWTLP AQQ+ GAMFVI
Sbjct: 510 AMGRPSYPPARTIPGGGASSSAEPPRFDA--ARTRFKGGYNDEMWTLPSAQQKNGAMFVI 567
Query: 259 PKQLGLFDDTFFRWESITKNHVATQAFTDPKD*IEYIENLLGEIEKISWIP*RMSYPTEY 80
P+QLGLF+D F RWES+TKNHVATQ FTD +D IEY+ENLLGEIEK+ WI RM+Y TEY
Sbjct: 568 PEQLGLFNDAFSRWESVTKNHVATQGFTDTRDKIEYMENLLGEIEKLIWIQWRMTYATEY 627
Query: 79 EALVNIGDGREGTQNILSQIKRVFS 5
EALV IG+GR+GTQNILSQ++RVFS
Sbjct: 628 EALVAIGEGRDGTQNILSQMRRVFS 652
>gb|ANK58536.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 228 bits (580), Expect = 6e-65
Identities = 123/205 (60%), Positives = 152/205 (74%), Gaps = 4/205 (1%)
Frame = -2
Query: 607 FINPVASEGGGEEELQLIAAGMEYPSLRGLTQEIETPQNDDQQIYSTSTVISPYRPPKDT 428
++NP SEGGG+++ L + M+YP ++IE ++ STS V SPYRPP+D
Sbjct: 462 YLNPF-SEGGGKDD-HLNSEEMDYPQRM---KKIE-------KLLSTSEVTSPYRPPEDA 509
Query: 427 AMGPPGYTPARADPG----PSRLPPIHEQQLSRTRFKGGFNNEMWTLPFAQQQGGAMFVI 260
AMG P Y PAR PG S PP + +RTRFKGG+N+EMWTLP AQQ+ GAMFVI
Sbjct: 510 AMGRPSYPPARTIPGGGASSSAEPPRFDA--ARTRFKGGYNDEMWTLPSAQQKNGAMFVI 567
Query: 259 PKQLGLFDDTFFRWESITKNHVATQAFTDPKD*IEYIENLLGEIEKISWIP*RMSYPTEY 80
P+QLGLF+D F RWES+TKNHVATQ FTD +D I+Y+ENLLGEIEK+ WI RM+Y TEY
Sbjct: 568 PEQLGLFNDAFSRWESVTKNHVATQGFTDTRDKIKYMENLLGEIEKLIWIQWRMTYATEY 627
Query: 79 EALVNIGDGREGTQNILSQIKRVFS 5
EALV IG+GR+GTQNILSQ++RVFS
Sbjct: 628 EALVAIGEGRDGTQNILSQMRRVFS 652
>ref|YP_006273075.1| polyprotein [Fig badnavirus 1]
gb|AEF56561.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 228 bits (580), Expect = 6e-65
Identities = 123/205 (60%), Positives = 152/205 (74%), Gaps = 4/205 (1%)
Frame = -2
Query: 607 FINPVASEGGGEEELQLIAAGMEYPSLRGLTQEIETPQNDDQQIYSTSTVISPYRPPKDT 428
++NP SEGGG+++ L + M+YP ++IE ++ STS V SPYRPP+D
Sbjct: 462 YLNPF-SEGGGKDD-HLNSEEMDYPQRM---KKIE-------KLLSTSEVTSPYRPPEDA 509
Query: 427 AMGPPGYTPARADPG----PSRLPPIHEQQLSRTRFKGGFNNEMWTLPFAQQQGGAMFVI 260
AMG P Y PAR PG S PP + +RTRFKGG+N+EMWTLP AQQ+ GAMFVI
Sbjct: 510 AMGRPSYPPARTIPGGGASSSAEPPRFDA--ARTRFKGGYNDEMWTLPSAQQKNGAMFVI 567
Query: 259 PKQLGLFDDTFFRWESITKNHVATQAFTDPKD*IEYIENLLGEIEKISWIP*RMSYPTEY 80
P+QLGLF+D F RWES+TKNHVATQ FTD +D I+Y+ENLLGEIEK+ WI RM+Y TEY
Sbjct: 568 PEQLGLFNDAFSRWESVTKNHVATQGFTDTRDKIKYMENLLGEIEKLIWIQWRMTYATEY 627
Query: 79 EALVNIGDGREGTQNILSQIKRVFS 5
EALV IG+GR+GTQNILSQ++RVFS
Sbjct: 628 EALVAIGEGRDGTQNILSQMRRVFS 652
>gb|ANK58545.1| polyprotein [Fig badnavirus 1]
Length = 1837
Score = 226 bits (576), Expect = 2e-64
Identities = 123/205 (60%), Positives = 151/205 (73%), Gaps = 4/205 (1%)
Frame = -2
Query: 607 FINPVASEGGGEEELQLIAAGMEYPSLRGLTQEIETPQNDDQQIYSTSTVISPYRPPKDT 428
++NP SEGGG+++ L + M+YP ++IE ++ STS V SPYRPP+D
Sbjct: 462 YLNPF-SEGGGKDD-HLNSEEMDYPQRM---KKIE-------KLLSTSEVTSPYRPPEDA 509
Query: 427 AMGPPGYTPARADPG----PSRLPPIHEQQLSRTRFKGGFNNEMWTLPFAQQQGGAMFVI 260
AM P Y PAR PG S PP + +RTRFKGG+N+EMWTLP AQQ+ GAMFVI
Sbjct: 510 AMRRPSYPPARTIPGGGASSSAEPPRFDA--ARTRFKGGYNDEMWTLPSAQQKNGAMFVI 567
Query: 259 PKQLGLFDDTFFRWESITKNHVATQAFTDPKD*IEYIENLLGEIEKISWIP*RMSYPTEY 80
P+QLGLF+D F RWES+TKNHVATQ FTD +D IEY+ENLLGEIEK+ WI RM+Y TEY
Sbjct: 568 PEQLGLFNDAFSRWESVTKNHVATQGFTDTRDKIEYMENLLGEIEKLIWIQWRMTYATEY 627
Query: 79 EALVNIGDGREGTQNILSQIKRVFS 5
EALV IG+GR+GTQNILSQ++RVFS
Sbjct: 628 EALVAIGEGRDGTQNILSQMRRVFS 652
>gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
Length = 1789
Score = 218 bits (556), Expect = 1e-61
Identities = 115/206 (55%), Positives = 145/206 (70%), Gaps = 5/206 (2%)
Frame = -2
Query: 607 FINPVASEGGGEEELQLIAAGMEYPS-LRGLTQEIETPQNDD--QQIYSTSTVISPYRPP 437
+INP + GG +E + E L + +E+ PQ +++ STS V PYRPP
Sbjct: 462 YINPFSEAGGEDERKKGERDEREQEQVLAAVEEELAYPQRFKAIEKLLSTSEVTGPYRPP 521
Query: 436 KDTAMGPPGYTPARA--DPGPSRLPPIHEQQLSRTRFKGGFNNEMWTLPFAQQQGGAMFV 263
D AMG P Y PARA + G S +RTRFKGG+N+EMWTLP AQQ+ GAMFV
Sbjct: 522 DDAAMGRPSYPPARAISEEGMSSSNYPSRFDTARTRFKGGYNDEMWTLPSAQQKNGAMFV 581
Query: 262 IPKQLGLFDDTFFRWESITKNHVATQAFTDPKD*IEYIENLLGEIEKISWIP*RMSYPTE 83
+P+QLGLF+D F RWES+TKNHVATQ+FTD +D +EY+ENLLGEIEK+ WI RM+Y E
Sbjct: 582 LPEQLGLFNDAFSRWESVTKNHVATQSFTDVRDKMEYMENLLGEIEKLIWIRWRMTYVAE 641
Query: 82 YEALVNIGDGREGTQNILSQIKRVFS 5
YE+L+ IGDGR+GTQNILSQ++RVFS
Sbjct: 642 YESLIAIGDGRDGTQNILSQMRRVFS 667
>ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
emb|CDN68224.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
Length = 1830
Score = 211 bits (538), Expect = 3e-59
Identities = 115/219 (52%), Positives = 147/219 (67%), Gaps = 5/219 (2%)
Frame = -2
Query: 646 DSAPIWDSYFDDDFINPVASEGGGEEELQLIAAGMEYPSLRGLTQ-EIETPQNDD--QQI 476
D P WD I E E EL+L + ++ + E+ PQ +++
Sbjct: 415 DDQPQWDDEPQATTIR--FEEFSSEAELELAYQQEVFAAVEEEAELELAYPQRFKAIEKL 472
Query: 475 YSTSTVISPYRPPKDTAMGPPGYTPARA--DPGPSRLPPIHEQQLSRTRFKGGFNNEMWT 302
STS V PYRPP D AMG P Y PAR+ + G S + +RTRF+GG+N+EMWT
Sbjct: 473 LSTSEVTGPYRPPDDAAMGRPSYPPARSISEEGVSSSNYPSKFNAARTRFRGGYNDEMWT 532
Query: 301 LPFAQQQGGAMFVIPKQLGLFDDTFFRWESITKNHVATQAFTDPKD*IEYIENLLGEIEK 122
LP AQQ+ GAMFV+P+QLGLF+D F RWES+TKNHVATQ+FTD +D +EY+ENLLGEIEK
Sbjct: 533 LPSAQQKNGAMFVLPEQLGLFNDAFSRWESVTKNHVATQSFTDVRDKMEYMENLLGEIEK 592
Query: 121 ISWIP*RMSYPTEYEALVNIGDGREGTQNILSQIKRVFS 5
+ WI RM+Y EYE+L+ IGDGR+GTQNILSQ++RVFS
Sbjct: 593 LIWIQWRMTYVAEYESLIAIGDGRDGTQNILSQMRRVFS 631
>gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]
Length = 1846
Score = 207 bits (527), Expect = 9e-58
Identities = 112/214 (52%), Positives = 139/214 (64%), Gaps = 11/214 (5%)
Frame = -2
Query: 613 DDFINPVASEGGGEEELQLIAAGMEYPSLRGLTQEIETPQNDD------QQIYSTSTVIS 452
DDFINP A EGGGE + L +E+ P D +++YSTS V S
Sbjct: 429 DDFINPFA-EGGGERD----TGSENSEKLFVFQEEVAEPTLDYPVMKKLEKVYSTSEVTS 483
Query: 451 PYRPPKDTAMGPPGYTPARADPGP-----SRLPPIHEQQLSRTRFKGGFNNEMWTLPFAQ 287
Y PP D MGPP Y PAR G + PP + R FK G+N+E+W+LP AQ
Sbjct: 484 RYTPPTDAVMGPPSYPPARNINGAGTSYAAASPPNFNR---RVNFKAGYNDELWSLPPAQ 540
Query: 286 QQGGAMFVIPKQLGLFDDTFFRWESITKNHVATQAFTDPKD*IEYIENLLGEIEKISWIP 107
Q+GGAMFVIP+Q+G+F D F RWESITKNHV++Q FTD +D +EY+ENLLGE+EK+ WI
Sbjct: 541 QKGGAMFVIPEQIGMFHDVFSRWESITKNHVSSQGFTDVRDKLEYMENLLGEVEKLLWIQ 600
Query: 106 *RMSYPTEYEALVNIGDGREGTQNILSQIKRVFS 5
RM Y EYE LV G+GREGTQNI+SQ++RVFS
Sbjct: 601 WRMQYNAEYEELVRTGEGREGTQNIISQMRRVFS 634
>gb|ASM61279.1| polyprotein, partial [Cacao swollen shoot virus]
Length = 263
Score = 180 bits (456), Expect = 1e-52
Identities = 107/226 (47%), Positives = 134/226 (59%), Gaps = 10/226 (4%)
Frame = -2
Query: 652 DSDSAPIWDSYFDDDFINP---VASEGGGEEELQLIAAGMEYPSLRGLTQEIETPQNDDQ 482
+ S PIWD ++D +P +A E+E Q IAA ++ +E+E P+ Q
Sbjct: 20 EGPSEPIWDQEEEEDEYDPNVYMAYLQKEEDEWQEIAASIQEE------REMEYPRRRPQ 73
Query: 481 QIYSTSTVISP---YRPPKDTAMGPPGYTPARADPG----PSRLPPIHEQQLSRTRFKGG 323
T TV S Y PP DT M P GY PA + PSR P + RFK
Sbjct: 74 ----TETVFSETVDYTPPGDTMMTPVGYPPASSSRSTVTTPSRPPLFEGRPTHMPRFKRD 129
Query: 322 FNNEMWTLPFAQQQGGAMFVIPKQLGLFDDTFFRWESITKNHVATQAFTDPKD*IEYIEN 143
E W LP +Q GA+FV+PKQ+GLF D F RWESITKN+VA Q FTDP + IE++EN
Sbjct: 130 DYTEWWQLPSSQGTTGALFVMPKQMGLFHDVFSRWESITKNYVAAQGFTDPTEKIEFMEN 189
Query: 142 LLGEIEKISWIP*RMSYPTEYEALVNIGDGREGTQNILSQIKRVFS 5
LLGE EK++WI RMSY EY+ L+ DGR+GTQN+LSQIKRVFS
Sbjct: 190 LLGETEKLTWIQWRMSYEAEYQQLITQADGRQGTQNVLSQIKRVFS 235
>ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]
gb|AHI90954.1| polyprotein [Hibiscus bacilliform virus GD1]
Length = 1892
Score = 192 bits (489), Expect = 1e-52
Identities = 108/244 (44%), Positives = 146/244 (59%), Gaps = 18/244 (7%)
Frame = -2
Query: 682 QYMASITTLTDSDSAPIWDSYF--------DDDFINPVASEGGG---------EEELQLI 554
Q+ T S +P W + F +D+ +P SE G EE+ + +
Sbjct: 433 QFDEEPATQPQSPQSPTWYNPFAEGGGSDENDENPDPEESEEMGNEMGYETEVEEQEEKV 492
Query: 553 AAGMEYPSLRGLTQEIETPQNDDQQIYSTSTVISPYRPPKDTAMGPPGYTPARADPGPSR 374
A E P L E +N+++ + + +S YRPP+DTAM P GY PAR + S
Sbjct: 493 AMIQEDPDLLPYPHLRELLKNEEKVFSTQQSEVSSYRPPQDTAMTPAGYAPARGEASSST 552
Query: 373 LPPIHEQQLSRT-RFKGGFNNEMWTLPFAQQQGGAMFVIPKQLGLFDDTFFRWESITKNH 197
P+ E + R +FK + E W P AQ Q GAMFVIP+Q+GLF D F RWESITKN+
Sbjct: 553 HQPMFEGYMPRRPQFKQDRSTEYWQFPTAQGQTGAMFVIPRQIGLFHDAFNRWESITKNY 612
Query: 196 VATQAFTDPKD*IEYIENLLGEIEKISWIP*RMSYPTEYEALVNIGDGREGTQNILSQIK 17
VA+Q FTD KD E++ENLLGE EK++W+ RM++PTEY+ +VN DGREGTQNILSQ++
Sbjct: 613 VASQGFTDSKDKAEFMENLLGETEKLTWVQWRMNFPTEYQEMVNAADGREGTQNILSQMR 672
Query: 16 RVFS 5
RVF+
Sbjct: 673 RVFT 676
>gb|AIK01824.1| ORF3 [Piper yellow mottle virus]
Length = 1925
Score = 190 bits (483), Expect = 7e-52
Identities = 104/214 (48%), Positives = 134/214 (62%), Gaps = 3/214 (1%)
Frame = -2
Query: 637 PIWDSYFDDDFINPVASEGGGEEELQLIAAGMEYPSLRGLTQEIETPQNDDQQIYSTSTV 458
P+WD+ +++ EG EE + MEYP +R L ++ Q+++S +
Sbjct: 535 PVWDNSEEEE-------EGYAAEEEEEEVNDMEYPHIRALRLKM-------QEVFSAQSE 580
Query: 457 ISPYRPPKDTAMGPPGYTPA---RADPGPSRLPPIHEQQLSRTRFKGGFNNEMWTLPFAQ 287
IS YRPP+DTAMGP Y PA + GPSR P S RFK + WTLP AQ
Sbjct: 581 ISQYRPPQDTAMGPSSYPPAVNITNEAGPSR-PMFEGYNKSGVRFKHKDLADSWTLPSAQ 639
Query: 286 QQGGAMFVIPKQLGLFDDTFFRWESITKNHVATQAFTDPKD*IEYIENLLGEIEKISWIP 107
QQ GA+FVIP QLGLFD F RWESITKN VA Q FTDP D + +IENLLGE EK++WI
Sbjct: 640 QQQGAVFVIPTQLGLFDSVFARWESITKNLVAAQGFTDPADKVGFIENLLGEAEKLTWIQ 699
Query: 106 *RMSYPTEYEALVNIGDGREGTQNILSQIKRVFS 5
R +Y EY+ ++N DGR GT+NILSQ++R+F+
Sbjct: 700 WRSTYQEEYQQMMNSADGRAGTENILSQVRRIFA 733
>gb|AIK01820.1| ORF3 [Piper yellow mottle virus]
Length = 1925
Score = 189 bits (481), Expect = 1e-51
Identities = 104/214 (48%), Positives = 134/214 (62%), Gaps = 3/214 (1%)
Frame = -2
Query: 637 PIWDSYFDDDFINPVASEGGGEEELQLIAAGMEYPSLRGLTQEIETPQNDDQQIYSTSTV 458
P+WD+ +++ EG EE + MEYP +R L ++ Q+++S +
Sbjct: 535 PVWDNSEEEE-------EGYAAEEEEEEVDDMEYPHVRALRLKM-------QEVFSAQSE 580
Query: 457 ISPYRPPKDTAMGPPGYTPA---RADPGPSRLPPIHEQQLSRTRFKGGFNNEMWTLPFAQ 287
IS YRPP+DTAMGP Y PA + GPSR P S RFK + WTLP AQ
Sbjct: 581 ISQYRPPQDTAMGPSSYPPAVNITNEAGPSR-PMFEGYNKSGVRFKHKDLADNWTLPSAQ 639
Query: 286 QQGGAMFVIPKQLGLFDDTFFRWESITKNHVATQAFTDPKD*IEYIENLLGEIEKISWIP 107
QQ GA+FVIP QLGLFD F RWESITKN VA Q FTDP D + +IENLLGE EK++WI
Sbjct: 640 QQQGAVFVIPTQLGLFDSVFARWESITKNLVAAQGFTDPADKVGFIENLLGEAEKLTWIQ 699
Query: 106 *RMSYPTEYEALVNIGDGREGTQNILSQIKRVFS 5
R +Y EY+ ++N DGR GT+NILSQ++R+F+
Sbjct: 700 WRSTYQEEYQQMMNSADGRAGTENILSQVRRIFA 733
>gb|AIK01816.1| ORF3 [Piper yellow mottle virus]
Length = 1925
Score = 189 bits (481), Expect = 1e-51
Identities = 105/214 (49%), Positives = 136/214 (63%), Gaps = 3/214 (1%)
Frame = -2
Query: 637 PIWDSYFDDDFINPVASEGGGEEELQLIAAGMEYPSLRGLTQEIETPQNDDQQIYSTSTV 458
P+WD+ +++ EG EE + I MEYP +R L ++ Q+++S +
Sbjct: 535 PVWDNSEEEE-------EGYAAEEEEEID-DMEYPHVRALRLKM-------QEVFSAQSE 579
Query: 457 ISPYRPPKDTAMGPPGYTPA---RADPGPSRLPPIHEQQLSRTRFKGGFNNEMWTLPFAQ 287
IS YRPP+DTAMGP Y PA + GPSR P S RFK + WTLP AQ
Sbjct: 580 ISQYRPPQDTAMGPSSYPPAVNITNEAGPSR-PMFEGYNKSGVRFKHKDLADNWTLPSAQ 638
Query: 286 QQGGAMFVIPKQLGLFDDTFFRWESITKNHVATQAFTDPKD*IEYIENLLGEIEKISWIP 107
QQ GA+FVIP QLGLFD F RWESITKN VA Q FTDP D +++IENLLGE EK++WI
Sbjct: 639 QQQGAVFVIPTQLGLFDSVFARWESITKNLVAAQGFTDPADKVDFIENLLGEAEKLTWIQ 698
Query: 106 *RMSYPTEYEALVNIGDGREGTQNILSQIKRVFS 5
R +Y EY+ ++N DGR GT+NILSQ++R+F+
Sbjct: 699 WRSTYQAEYQQMMNSADGRAGTENILSQVRRIFA 732
>ref|YP_008567619.1| ORF3 [Piper yellow mottle virus]
gb|AGV08293.1| ORF3 [Piper yellow mottle virus]
Length = 1925
Score = 189 bits (481), Expect = 1e-51
Identities = 105/214 (49%), Positives = 136/214 (63%), Gaps = 3/214 (1%)
Frame = -2
Query: 637 PIWDSYFDDDFINPVASEGGGEEELQLIAAGMEYPSLRGLTQEIETPQNDDQQIYSTSTV 458
P+WD+ +++ EG EE + I MEYP +R L ++ Q+++S +
Sbjct: 535 PVWDNSEEEE-------EGYAAEEEEEID-DMEYPHVRALRLKM-------QEVFSAQSE 579
Query: 457 ISPYRPPKDTAMGPPGYTPA---RADPGPSRLPPIHEQQLSRTRFKGGFNNEMWTLPFAQ 287
IS YRPP+DTAMGP Y PA + GPSR P S RFK + WTLP AQ
Sbjct: 580 ISQYRPPQDTAMGPSSYPPAVNITNEAGPSR-PMFEGYNKSGVRFKHKDLADNWTLPSAQ 638
Query: 286 QQGGAMFVIPKQLGLFDDTFFRWESITKNHVATQAFTDPKD*IEYIENLLGEIEKISWIP 107
QQ GA+FVIP QLGLFD F RWESITKN VA Q FTDP D +++IENLLGE EK++WI
Sbjct: 639 QQQGAVFVIPTQLGLFDSVFARWESITKNLVAAQGFTDPADKVDFIENLLGEAEKLTWIQ 698
Query: 106 *RMSYPTEYEALVNIGDGREGTQNILSQIKRVFS 5
R +Y EY+ ++N DGR GT+NILSQ++R+F+
Sbjct: 699 WRSTYQAEYQQMMNSADGRAGTENILSQVRRIFA 732
>gb|ASM61278.1| polyprotein, partial [Cacao swollen shoot virus]
Length = 265
Score = 176 bits (445), Expect = 5e-51
Identities = 104/219 (47%), Positives = 136/219 (62%), Gaps = 8/219 (3%)
Frame = -2
Query: 637 PIWDSYFDDDFINP---VASEGGGEEELQLIAAGMEYPSLRGLTQEIETPQNDDQQIYST 467
PIWD ++D +P +A E++ Q IAA ++ +E+E P+ Q +
Sbjct: 27 PIWDQEEEEDEYDPNVYMAYLQKEEDKWQEIAATIQEE------RELEYPRRRPQTETAF 80
Query: 466 STVISPYRPPKDTAMGPPGYTPARADPG----PSRLPPIHEQQLSRT-RFKGGFNNEMWT 302
S + Y PP DT M P GY PA + PSR PP+ E ++S +FK E W
Sbjct: 81 SETVD-YTPPVDTMMTPVGYPPASSSRSTVTTPSR-PPLFEGRISHVPKFKRDDYTEWWQ 138
Query: 301 LPFAQQQGGAMFVIPKQLGLFDDTFFRWESITKNHVATQAFTDPKD*IEYIENLLGEIEK 122
LP +Q GA+FV+PKQ+GLF D F RWESITKN+VA Q FTDP + +E++ENLLGE EK
Sbjct: 139 LPSSQGTTGALFVMPKQMGLFHDVFSRWESITKNYVAAQGFTDPTEKMEFMENLLGETEK 198
Query: 121 ISWIP*RMSYPTEYEALVNIGDGREGTQNILSQIKRVFS 5
++WI RMSY EY+ L+ DGR+GTQNILSQIKRVFS
Sbjct: 199 LTWIQWRMSYEAEYQQLLTQADGRQGTQNILSQIKRVFS 237
>gb|ASM61283.1| polyprotein, partial [Cacao swollen shoot virus]
Length = 265
Score = 174 bits (440), Expect = 3e-50
Identities = 108/228 (47%), Positives = 138/228 (60%), Gaps = 12/228 (5%)
Frame = -2
Query: 652 DSDSAPIWDSYFDDDFINP---VASEGGGEEELQLIAAGMEYPSLRGLTQEIETPQNDDQ 482
+ S PIWD ++D +P +A E+E Q IAA ++ E+E P+ Q
Sbjct: 21 EGSSEPIWDQEEEEDEYDPNIYMAYLQKEEDEWQEIAASLQEE------MEMEYPRRRPQ 74
Query: 481 QIYSTSTVISP---YRPPKDTAMGPPGYTPARADPG----PSRLPPIHEQQLSRT-RF-K 329
T TV S Y PP DT M P GY PA + PSR PP+ E +++ RF K
Sbjct: 75 ----TETVFSETVDYTPPSDTMMTPVGYPPASSSRSTVTTPSR-PPLFEGRVTHVPRFLK 129
Query: 328 GGFNNEMWTLPFAQQQGGAMFVIPKQLGLFDDTFFRWESITKNHVATQAFTDPKD*IEYI 149
E W LP +Q GA+FV+PKQ+GLF D F RWESITKN+VA Q FTDP + +E++
Sbjct: 130 RDDYTEWWQLPSSQGTTGALFVMPKQMGLFYDVFSRWESITKNYVAAQGFTDPTEKMEFM 189
Query: 148 ENLLGEIEKISWIP*RMSYPTEYEALVNIGDGREGTQNILSQIKRVFS 5
ENLLGE EK++WI RM+Y EY+ L+ DGR+GTQNILSQIKRVFS
Sbjct: 190 ENLLGETEKLTWIQWRMNYEAEYQQLLTQADGRQGTQNILSQIKRVFS 237
>gb|ASM61288.1| polyprotein, partial [Cacao swollen shoot virus]
Length = 265
Score = 174 bits (440), Expect = 3e-50
Identities = 108/228 (47%), Positives = 138/228 (60%), Gaps = 12/228 (5%)
Frame = -2
Query: 652 DSDSAPIWDSYFDDDFINP---VASEGGGEEELQLIAAGMEYPSLRGLTQEIETPQNDDQ 482
+ S PIWD ++D +P +A E+E Q IAA ++ E+E P+ Q
Sbjct: 21 EGSSEPIWDQEEEEDEYDPNIYMAYLQKEEDEWQEIAASLQEE------MEMEYPRRRPQ 74
Query: 481 QIYSTSTVISP---YRPPKDTAMGPPGYTPARADPG----PSRLPPIHEQQLSRT-RF-K 329
T TV S Y PP DT M P GY PA + PSR PP+ E +++ RF K
Sbjct: 75 ----TETVFSETVDYTPPSDTMMTPVGYPPASSSRSTVTTPSR-PPLFEGRVTHVPRFLK 129
Query: 328 GGFNNEMWTLPFAQQQGGAMFVIPKQLGLFDDTFFRWESITKNHVATQAFTDPKD*IEYI 149
E W LP +Q GA+FV+PKQ+GLF D F RWESITKN+VA Q FTDP + +E++
Sbjct: 130 RDDYTEWWQLPSSQGTTGALFVMPKQMGLFYDVFSRWESITKNYVAAQGFTDPTEKMEFM 189
Query: 148 ENLLGEIEKISWIP*RMSYPTEYEALVNIGDGREGTQNILSQIKRVFS 5
ENLLGE EK++WI RM+Y EY+ L+ DGR+GTQNILSQIKRVFS
Sbjct: 190 ENLLGETEKLTWIQWRMNYEAEYQQLLTQADGRQGTQNILSQIKRVFS 237
>gb|ASM61284.1| polyprotein, partial [Cacao swollen shoot virus]
Length = 267
Score = 174 bits (440), Expect = 3e-50
Identities = 108/228 (47%), Positives = 138/228 (60%), Gaps = 12/228 (5%)
Frame = -2
Query: 652 DSDSAPIWDSYFDDDFINP---VASEGGGEEELQLIAAGMEYPSLRGLTQEIETPQNDDQ 482
+ S PIWD ++D +P +A E+E Q IAA ++ E+E P+ Q
Sbjct: 23 EGSSEPIWDQEEEEDEYDPNIYMAYLQKEEDEWQEIAASLQEE------MEMEYPRRRPQ 76
Query: 481 QIYSTSTVISP---YRPPKDTAMGPPGYTPARADPG----PSRLPPIHEQQLSRT-RF-K 329
T TV S Y PP DT M P GY PA + PSR PP+ E +++ RF K
Sbjct: 77 ----TETVFSETVDYTPPSDTMMTPVGYPPASSSRSTVTTPSR-PPLFEGRVTHVPRFLK 131
Query: 328 GGFNNEMWTLPFAQQQGGAMFVIPKQLGLFDDTFFRWESITKNHVATQAFTDPKD*IEYI 149
E W LP +Q GA+FV+PKQ+GLF D F RWESITKN+VA Q FTDP + +E++
Sbjct: 132 RDDYTEWWQLPSSQGTTGALFVMPKQMGLFYDVFSRWESITKNYVAAQGFTDPTEKMEFM 191
Query: 148 ENLLGEIEKISWIP*RMSYPTEYEALVNIGDGREGTQNILSQIKRVFS 5
ENLLGE EK++WI RM+Y EY+ L+ DGR+GTQNILSQIKRVFS
Sbjct: 192 ENLLGETEKLTWIQWRMNYEAEYQQLLTQADGRQGTQNILSQIKRVFS 239
>gb|ASM61281.1| polyprotein, partial [Cacao swollen shoot virus]
Length = 267
Score = 174 bits (440), Expect = 3e-50
Identities = 108/228 (47%), Positives = 138/228 (60%), Gaps = 12/228 (5%)
Frame = -2
Query: 652 DSDSAPIWDSYFDDDFINP---VASEGGGEEELQLIAAGMEYPSLRGLTQEIETPQNDDQ 482
+ S PIWD ++D +P +A E+E Q IAA ++ E+E P+ Q
Sbjct: 23 EGSSEPIWDQEEEEDEYDPNIYMAYLQKEEDEWQEIAASLQEE------MEMEYPRRRPQ 76
Query: 481 QIYSTSTVISP---YRPPKDTAMGPPGYTPARADPG----PSRLPPIHEQQLSRT-RF-K 329
T TV S Y PP DT M P GY PA + PSR PP+ E +++ RF K
Sbjct: 77 ----TETVFSETVDYTPPSDTMMTPVGYPPASSSRSTVTTPSR-PPLFEGRVTHVPRFLK 131
Query: 328 GGFNNEMWTLPFAQQQGGAMFVIPKQLGLFDDTFFRWESITKNHVATQAFTDPKD*IEYI 149
E W LP +Q GA+FV+PKQ+GLF D F RWESITKN+VA Q FTDP + +E++
Sbjct: 132 RDDYTEWWQLPSSQGTTGALFVMPKQMGLFYDVFSRWESITKNYVAAQGFTDPTEKMEFM 191
Query: 148 ENLLGEIEKISWIP*RMSYPTEYEALVNIGDGREGTQNILSQIKRVFS 5
ENLLGE EK++WI RM+Y EY+ L+ DGR+GTQNILSQIKRVFS
Sbjct: 192 ENLLGETEKLTWIQWRMNYEAEYQQLLTQADGRQGTQNILSQIKRVFS 239