BLASTX nr result
ID: Cheilocostus21_contig00061705
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00061705
(706 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020258690.1| uncharacterized protein LOC109835105 [Aspara... 59 1e-06
gb|PRQ60568.1| putative RNA-directed DNA polymerase [Rosa chinen... 55 4e-06
gb|PNX93517.1| retrovirus-related Pol polyprotein from transposo... 52 6e-06
gb|PNX58628.1| hypothetical protein L195_g051003, partial [Trifo... 52 7e-06
gb|KYP51533.1| Copia protein [Cajanus cajan] 45 8e-06
gb|KYP44825.1| Retrovirus-related Pol polyprotein from transposo... 48 9e-06
ref|XP_018504255.1| PREDICTED: uncharacterized protein LOC108867... 55 9e-06
gb|KYP51683.1| Copia protein, partial [Cajanus cajan] 48 9e-06
gb|PRQ53465.1| putative RNA-directed DNA polymerase [Rosa chinen... 55 1e-05
>ref|XP_020258690.1| uncharacterized protein LOC109835105 [Asparagus officinalis]
Length = 262
Score = 58.9 bits (141), Expect = 1e-06
Identities = 28/71 (39%), Positives = 43/71 (60%)
Frame = +1
Query: 7 DTDYAGN*GNRRSAYRYLXXXXXXXXXXXXRNKNVVT*SSAKAKYRVIAHIACEMRWLQT 186
D YAG+ G+R+S R+ + ++VV+ SSA+A+YR +AH ACEM WL+
Sbjct: 135 DAGYAGDMGDRKSTSRFCTFVGGNLVTWRSKKQDVVSRSSAEAEYRAMAHTACEMVWLRK 194
Query: 187 LIKDLGFLHQG 219
+ +LGF+ G
Sbjct: 195 FMTELGFVQSG 205
>gb|PRQ60568.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 697
Score = 55.1 bits (131), Expect(2) = 4e-06
Identities = 29/67 (43%), Positives = 39/67 (58%)
Frame = +1
Query: 7 DTDYAGN*GNRRSAYRYLXXXXXXXXXXXXRNKNVVT*SSAKAKYRVIAHIACEMRWLQT 186
D D+AG+ +RRS Y + + VV SSA+A+YR +AH CEM WL+
Sbjct: 544 DADWAGSITDRRSTSGYFTFVGGNLVTWRSKKQKVVARSSAEAEYRGMAHGVCEMLWLRH 603
Query: 187 LIKDLGF 207
L+KDLGF
Sbjct: 604 LMKDLGF 610
Score = 24.3 bits (51), Expect(2) = 4e-06
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 281 TKYIEVDYYFLLDVLIPKKINI 346
TK++EVD +F+ + L K IN+
Sbjct: 638 TKHVEVDRHFIKEKLESKTINM 659
>gb|PNX93517.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 1465
Score = 51.6 bits (122), Expect(2) = 6e-06
Identities = 26/71 (36%), Positives = 41/71 (57%)
Frame = +1
Query: 1 WFDTDYAGN*GNRRSAYRYLXXXXXXXXXXXXRNKNVVT*SSAKAKYRVIAHIACEMRWL 180
W D+D+AG +RRS ++ + +NVV+ SSA+A+YR +A CE++WL
Sbjct: 1310 WCDSDWAGCPLSRRSLTGWIVFLGNSPISWKTKKQNVVSRSSAEAEYRSMATTTCELKWL 1369
Query: 181 QTLIKDLGFLH 213
+ L+ LG H
Sbjct: 1370 KALLLSLGVSH 1380
Score = 26.9 bits (58), Expect(2) = 6e-06
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 281 TKYIEVDYYFLLDVLIPKKINIH 349
TK+IEVD +FL D L+ I+ H
Sbjct: 1406 TKHIEVDCHFLRDELLKGNISTH 1428
>gb|PNX58628.1| hypothetical protein L195_g051003, partial [Trifolium pratense]
gb|PNX68909.1| hypothetical protein L195_g056424, partial [Trifolium pratense]
Length = 184
Score = 51.6 bits (122), Expect(2) = 7e-06
Identities = 26/71 (36%), Positives = 41/71 (57%)
Frame = +1
Query: 1 WFDTDYAGN*GNRRSAYRYLXXXXXXXXXXXXRNKNVVT*SSAKAKYRVIAHIACEMRWL 180
W D+D+AG +RRS ++ + +NVV+ SSA+A+YR +A CE++WL
Sbjct: 29 WCDSDWAGCPLSRRSLTGWIVFLGNSPISWKTKKQNVVSRSSAEAEYRSMATTTCELKWL 88
Query: 181 QTLIKDLGFLH 213
+ L+ LG H
Sbjct: 89 KALLLSLGVSH 99
Score = 26.9 bits (58), Expect(2) = 7e-06
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 281 TKYIEVDYYFLLDVLIPKKINIH 349
TK+IEVD +FL D L+ I+ H
Sbjct: 125 TKHIEVDCHFLRDELLKGNISTH 147
>gb|KYP51533.1| Copia protein [Cajanus cajan]
Length = 235
Score = 45.4 bits (106), Expect(3) = 8e-06
Identities = 25/67 (37%), Positives = 36/67 (53%)
Frame = +1
Query: 7 DTDYAGN*GNRRSAYRYLXXXXXXXXXXXXRNKNVVT*SSAKAKYRVIAHIACEMRWLQT 186
D D+AG +R S RY + +NVV SS +A+YR +A I CE W++
Sbjct: 100 DADWAGCPIDRCSTTRYYVFLGGNIISWKSKKQNVVARSSVEAEYRAMALITCEFVWIKQ 159
Query: 187 LIKDLGF 207
LI++L F
Sbjct: 160 LIRELRF 166
Score = 28.1 bits (61), Expect(3) = 8e-06
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +2
Query: 281 TKYIEVDYYFLLDVLIPKKINIHC**LIERFFVLIRSNQHLFSILRESIR 430
TK+IEVD +F+ + L+ K+I I F + SN+ L ++ +S+R
Sbjct: 194 TKHIEVDCHFVREKLLSKEI-------ITEF---VNSNEQLADVMTKSLR 233
Score = 23.9 bits (50), Expect(3) = 8e-06
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3
Query: 228 WCDKQVAMYIVINLV 272
+CD QVA++I NLV
Sbjct: 175 YCDNQVALHITSNLV 189
>gb|KYP44825.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1371
Score = 47.8 bits (112), Expect(3) = 9e-06
Identities = 25/67 (37%), Positives = 37/67 (55%)
Frame = +1
Query: 7 DTDYAGN*GNRRSAYRYLXXXXXXXXXXXXRNKNVVT*SSAKAKYRVIAHIACEMRWLQT 186
D D+AG +RRS Y + +NVV SS +AKYR +A I CE+ W++
Sbjct: 1218 DADWAGCPIDRRSTTGYCVFLGGNLISWKSKKQNVVARSSVEAKYRAMALITCELMWIKQ 1277
Query: 187 LIKDLGF 207
L+++L F
Sbjct: 1278 LLQELKF 1284
Score = 28.1 bits (61), Expect(3) = 9e-06
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +2
Query: 281 TKYIEVDYYFLLDVLIPKKINIHC**LIERFFVLIRSNQHLFSILRESIR 430
TK+IEVD +F+ + L+ K+I + +F + SN+ L ++ +S+R
Sbjct: 1312 TKHIEVDCHFVREKLLSKEI-------VTKF---VTSNEQLADVMTKSLR 1351
Score = 21.2 bits (43), Expect(3) = 9e-06
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 228 WCDKQVAMYIVINLV 272
+CD QVA++I N V
Sbjct: 1293 YCDNQVALHIASNPV 1307
>ref|XP_018504255.1| PREDICTED: uncharacterized protein LOC108867611 [Pyrus x
bretschneideri]
Length = 175
Score = 55.1 bits (131), Expect = 9e-06
Identities = 27/67 (40%), Positives = 40/67 (59%)
Frame = +1
Query: 7 DTDYAGN*GNRRSAYRYLXXXXXXXXXXXXRNKNVVT*SSAKAKYRVIAHIACEMRWLQT 186
D D+AGN N++S Y +N++V+ SSA+A+YR +A I CE+ WL+
Sbjct: 99 DVDWAGNALNKKSTTGYCTFVDGNLVTWKSKNQHVIAHSSAEAEYRAMATIVCELIWLKG 158
Query: 187 LIKDLGF 207
L+ DLGF
Sbjct: 159 LLSDLGF 165
>gb|KYP51683.1| Copia protein, partial [Cajanus cajan]
Length = 397
Score = 47.8 bits (112), Expect(3) = 9e-06
Identities = 25/67 (37%), Positives = 38/67 (56%)
Frame = +1
Query: 7 DTDYAGN*GNRRSAYRYLXXXXXXXXXXXXRNKNVVT*SSAKAKYRVIAHIACEMRWLQT 186
D D+AG +RRS Y + +NVV SSA+A+YR +A I CE+ W++
Sbjct: 244 DADWAGCPIDRRSTTGYCVFLGGNLISWKSKKQNVVARSSAEAEYRAMALITCELMWIKQ 303
Query: 187 LIKDLGF 207
L+++L F
Sbjct: 304 LLQELKF 310
Score = 28.1 bits (61), Expect(3) = 9e-06
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +2
Query: 281 TKYIEVDYYFLLDVLIPKKINIHC**LIERFFVLIRSNQHLFSILRESIR 430
TK+IEVD +F+ + L+ K+I + +F + SN+ L ++ +S+R
Sbjct: 338 TKHIEVDCHFVREKLLSKEI-------VTKF---VTSNEQLADVMTKSLR 377
Score = 21.2 bits (43), Expect(3) = 9e-06
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 228 WCDKQVAMYIVINLV 272
+CD QVA++I N V
Sbjct: 319 YCDNQVALHIASNPV 333
>gb|PRQ53465.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1350
Score = 55.1 bits (131), Expect(2) = 1e-05
Identities = 29/67 (43%), Positives = 39/67 (58%)
Frame = +1
Query: 7 DTDYAGN*GNRRSAYRYLXXXXXXXXXXXXRNKNVVT*SSAKAKYRVIAHIACEMRWLQT 186
D D+AG+ +RRS Y + + VV SSA+A+YR +AH CEM WL+
Sbjct: 1197 DADWAGSITDRRSTSGYFTFVGGNLVTWRSKKQKVVARSSAEAEYRGMAHGVCEMLWLRH 1256
Query: 187 LIKDLGF 207
L+KDLGF
Sbjct: 1257 LMKDLGF 1263
Score = 22.7 bits (47), Expect(2) = 1e-05
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2
Query: 281 TKYIEVDYYFLLDVLIPKKINI 346
TK++EVD +F+ + L + IN+
Sbjct: 1291 TKHVEVDRHFIKEKLESETINM 1312