BLASTX nr result
ID: Cheilocostus21_contig00061679
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cheilocostus21_contig00061679
(875 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|GAV87838.1| RVT_2 domain-containing protein, partial [Cephal... 60 4e-31
gb|PRQ42837.1| putative RNA-directed DNA polymerase [Rosa chinen... 66 8e-31
gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa] 66 8e-31
gb|PRQ55789.1| putative RNA-directed DNA polymerase [Rosa chinen... 66 8e-31
ref|XP_020262510.1| uncharacterized protein LOC109838480 [Aspara... 69 1e-30
ref|XP_020262928.1| uncharacterized protein LOC109838913 [Aspara... 61 1e-30
gb|PRQ31964.1| putative RNA-directed DNA polymerase [Rosa chinen... 64 2e-30
ref|XP_020258690.1| uncharacterized protein LOC109835105 [Aspara... 62 1e-29
gb|PRQ35370.1| putative RNA-directed DNA polymerase [Rosa chinen... 63 1e-29
emb|CAN73101.1| hypothetical protein VITISV_042890 [Vitis vinifera] 65 1e-29
emb|CAN72440.1| hypothetical protein VITISV_039162 [Vitis vinifera] 64 2e-29
ref|XP_023905091.1| uncharacterized protein LOC112016851 [Quercu... 57 3e-29
gb|PRQ56600.1| putative RNA-directed DNA polymerase [Rosa chinen... 65 3e-29
emb|CAN79672.1| hypothetical protein VITISV_012210 [Vitis vinifera] 60 3e-29
gb|KYP34729.1| Retrovirus-related Pol polyprotein from transposo... 60 4e-29
gb|KYP74866.1| Retrovirus-related Pol polyprotein from transposo... 65 6e-29
gb|KYP51683.1| Copia protein, partial [Cajanus cajan] 63 9e-29
gb|KYP44825.1| Retrovirus-related Pol polyprotein from transposo... 62 1e-28
emb|CAN67925.1| hypothetical protein VITISV_021168 [Vitis vinifera] 63 1e-28
gb|KYP58900.1| Retrovirus-related Pol polyprotein from transposo... 62 1e-28
>dbj|GAV87838.1| RVT_2 domain-containing protein, partial [Cephalotus follicularis]
Length = 555
Score = 60.1 bits (144), Expect(4) = 4e-31
Identities = 35/71 (49%), Positives = 44/71 (61%), Gaps = 6/71 (8%)
Frame = -2
Query: 313 APRKGLIYKKHRHTMI*GY-----AKNVNDR*SMTGYYTYVGRNLVTWKSKK-AKYCS*I 152
AP KGLIY+ +RH + Y A + +DR S TGY T+VG NLV+W+SKK
Sbjct: 382 APGKGLIYRPNRHMDLVAYSDADWAGSTSDRRSTTGYCTFVGGNLVSWRSKKQTTVARSS 441
Query: 151 KHAKYRAMAHT 119
A+YRAMAHT
Sbjct: 442 AEAEYRAMAHT 452
Score = 55.5 bits (132), Expect(4) = 4e-31
Identities = 27/51 (52%), Positives = 37/51 (72%)
Frame = -3
Query: 468 DSTKYRRPFEKLIYLTVTGPDIAYSDGLVSQLIQKPQKPH*EILMRIL*YI 316
D +YR KLIYLTVT PDI+++ G++SQ IQ PQK H ++ +RIL Y+
Sbjct: 329 DVHQYRSLIGKLIYLTVTRPDISFAVGVLSQFIQAPQKAHWDVAIRILRYL 379
Score = 50.8 bits (120), Expect(4) = 4e-31
Identities = 28/65 (43%), Positives = 39/65 (60%)
Frame = -1
Query: 710 GLLELDFWNKRSKDTSKKDLGKPKYFLGIEAAYQRKCIAFSQCKYALNLFKETEMLGCKP 531
G++E+ + ++ T KDLG YF+GIE +K ++ Q KY LNL ET MLGCK
Sbjct: 252 GIIEVKSYLQQHFQT--KDLGD-HYFIGIEVVRSKKGLSLFQRKYVLNLLSETGMLGCKQ 308
Query: 530 IQTPM 516
+ PM
Sbjct: 309 VDIPM 313
Score = 38.1 bits (87), Expect(4) = 4e-31
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = -1
Query: 122 YTACEMMWFHNLMQDFNIVCTDPMAMLYNNQAAIFVASN 6
+T E+MW +L+ + ++ + M M +NQAAI++ASN
Sbjct: 451 HTTAELMWLRSLLLEMGLLVSKLMKMFCDNQAAIYIASN 489
>gb|PRQ42837.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1231
Score = 66.2 bits (160), Expect(4) = 8e-31
Identities = 32/57 (56%), Positives = 37/57 (64%)
Frame = -1
Query: 677 SKDTSKKDLGKPKYFLGIEAAYQRKCIAFSQCKYALNLFKETEMLGCKPIQTPMAQN 507
S + KDLG KYFLGIE A + CI SQ KY L+L ET ML CKP+ TP+ QN
Sbjct: 936 SSEFEMKDLGNLKYFLGIEVARGKDCIVLSQRKYVLDLLAETGMLDCKPVATPIEQN 992
Score = 60.8 bits (146), Expect(4) = 8e-31
Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 6/69 (8%)
Frame = -2
Query: 313 APRKGLIYKKHRHTMI*GY-----AKNVNDR*SMTGYYTYVGRNLVTWKSKKAKYCS*IK 149
AP KGLI+ K+ H + GY A ++ DR S +GY+T+VG NLVTWKSKK K +
Sbjct: 1058 APGKGLIFSKYSHLDVSGYTDADWAGSITDRRSTSGYFTFVGGNLVTWKSKKQKVVARSS 1117
Query: 148 -HAKYRAMA 125
A+YR MA
Sbjct: 1118 AEAEYRGMA 1126
Score = 43.5 bits (101), Expect(4) = 8e-31
Identities = 20/48 (41%), Positives = 32/48 (66%)
Frame = -3
Query: 459 KYRRPFEKLIYLTVTGPDIAYSDGLVSQLIQKPQKPH*EILMRIL*YI 316
+Y+R +LIYL+ T PD+AY+ +VSQ + P + H + + RIL Y+
Sbjct: 1008 RYQRLVGRLIYLSHTRPDLAYAVSVVSQFMHNPSEAHMDAVFRILQYL 1055
Score = 32.7 bits (73), Expect(4) = 8e-31
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 113 CEMMWFHNLMQDFNIVCTDPMAMLYNNQAAIFVASN 6
CEM+W NL+ D M + +N+AAI +A N
Sbjct: 1130 CEMLWLRNLLNDLGFGQKKAMPLYCDNKAAIEIAHN 1165
>gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]
Length = 1180
Score = 66.2 bits (160), Expect(4) = 8e-31
Identities = 32/57 (56%), Positives = 37/57 (64%)
Frame = -1
Query: 677 SKDTSKKDLGKPKYFLGIEAAYQRKCIAFSQCKYALNLFKETEMLGCKPIQTPMAQN 507
S + KDLG KYFLGIE A + CI SQ KY L+L ET ML CKP+ TP+ QN
Sbjct: 885 SSEFEMKDLGNLKYFLGIEVARGKDCIVLSQRKYVLDLLAETGMLDCKPVATPIEQN 941
Score = 60.8 bits (146), Expect(4) = 8e-31
Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 6/69 (8%)
Frame = -2
Query: 313 APRKGLIYKKHRHTMI*GY-----AKNVNDR*SMTGYYTYVGRNLVTWKSKKAKYCS*IK 149
AP KGLI+ K+ H + GY A ++ DR S +GY+T+VG NLVTWKSKK K +
Sbjct: 1007 APGKGLIFSKYSHLDVSGYTDADWAGSITDRRSTSGYFTFVGGNLVTWKSKKQKVVARSS 1066
Query: 148 -HAKYRAMA 125
A+YR MA
Sbjct: 1067 AEAEYRGMA 1075
Score = 43.5 bits (101), Expect(4) = 8e-31
Identities = 20/48 (41%), Positives = 32/48 (66%)
Frame = -3
Query: 459 KYRRPFEKLIYLTVTGPDIAYSDGLVSQLIQKPQKPH*EILMRIL*YI 316
+Y+R +LIYL+ T PD+AY+ +VSQ + P + H + + RIL Y+
Sbjct: 957 RYQRLVGRLIYLSHTRPDLAYAVSVVSQFMHNPSEAHMDAVFRILQYL 1004
Score = 32.7 bits (73), Expect(4) = 8e-31
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 113 CEMMWFHNLMQDFNIVCTDPMAMLYNNQAAIFVASN 6
CEM+W NL+ D M + +N+AAI +A N
Sbjct: 1079 CEMLWLRNLLNDLGFRQKKAMPLYCDNKAAIEIAHN 1114
>gb|PRQ55789.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1127
Score = 66.2 bits (160), Expect(4) = 8e-31
Identities = 32/57 (56%), Positives = 37/57 (64%)
Frame = -1
Query: 677 SKDTSKKDLGKPKYFLGIEAAYQRKCIAFSQCKYALNLFKETEMLGCKPIQTPMAQN 507
S + KDLG KYFLGIE A + CI SQ KY L+L ET ML CKP+ TP+ QN
Sbjct: 832 SSEFEMKDLGNLKYFLGIEVARGKDCIVLSQRKYVLDLLAETGMLDCKPVATPIEQN 888
Score = 60.1 bits (144), Expect(4) = 8e-31
Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 6/68 (8%)
Frame = -2
Query: 313 APRKGLIYKKHRHTMI*GY-----AKNVNDR*SMTGYYTYVGRNLVTWKSKKAKYCS*IK 149
AP KGLI+ K+ H + GY A N+ DR S +GY+T++G NLVTWKSKK K +
Sbjct: 954 APGKGLIFSKYSHLDVSGYTDADWAGNITDRRSTSGYFTFLGGNLVTWKSKKQKVVARSS 1013
Query: 148 -HAKYRAM 128
A+YR M
Sbjct: 1014 AEAEYRGM 1021
Score = 43.5 bits (101), Expect(4) = 8e-31
Identities = 20/48 (41%), Positives = 32/48 (66%)
Frame = -3
Query: 459 KYRRPFEKLIYLTVTGPDIAYSDGLVSQLIQKPQKPH*EILMRIL*YI 316
+Y+R +LIYL+ T PD+AY+ +VSQ + P + H + + RIL Y+
Sbjct: 904 RYQRLVGRLIYLSHTRPDLAYAVSVVSQFMHNPSEAHMDAVFRILQYL 951
Score = 33.5 bits (75), Expect(4) = 8e-31
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 113 CEMMWFHNLMQDFNIVCTDPMAMLYNNQAAIFVASN 6
CEM+W NL+ D M++ +N+AAI +A N
Sbjct: 1026 CEMLWLRNLLNDLGFRQKKAMSLYCDNKAAIEIAHN 1061
>ref|XP_020262510.1| uncharacterized protein LOC109838480 [Asparagus officinalis]
Length = 262
Score = 69.3 bits (168), Expect(4) = 1e-30
Identities = 39/70 (55%), Positives = 47/70 (67%), Gaps = 6/70 (8%)
Frame = -2
Query: 310 PRKGLIYKKHRHTMI*-----GYAKNVNDR*SMTGYYTYVGRNLVTWKSKKAKYCS*IK- 149
P KGL+YKKH HT I GYA ++ DR S++G+ TYVG NLVTW+SKK S
Sbjct: 116 PGKGLLYKKHDHTHISAFSDAGYAGDMGDRKSISGFCTYVGGNLVTWRSKKQDVVSRSSA 175
Query: 148 HAKYRAMAHT 119
A+YRAMAHT
Sbjct: 176 EAEYRAMAHT 185
Score = 55.1 bits (131), Expect(4) = 1e-30
Identities = 26/49 (53%), Positives = 32/49 (65%)
Frame = -1
Query: 653 LGKPKYFLGIEAAYQRKCIAFSQCKYALNLFKETEMLGCKPIQTPMAQN 507
+GKPKYFL IE AYQ+ + SQ KY L+L +E +L CK TPM N
Sbjct: 1 MGKPKYFLRIEVAYQKHGLLLSQRKYVLDLLEEAGLLECKHASTPMEAN 49
Score = 43.9 bits (102), Expect(4) = 1e-30
Identities = 22/53 (41%), Positives = 35/53 (66%)
Frame = -3
Query: 474 LVDSTKYRRPFEKLIYLTVTGPDIAYSDGLVSQLIQKPQKPH*EILMRIL*YI 316
L D+ +YRR KLIYL VT PDI ++ G++S+ + K ++ H ++IL Y+
Sbjct: 60 LDDAGRYRRLIGKLIYLIVTRPDITFAVGVLSRFMHKHREVHWITALKILAYV 112
Score = 34.7 bits (78), Expect(4) = 1e-30
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -1
Query: 122 YTACEMMWFHNLMQDFNIVCTDPMAMLYNNQAA 24
+TACEM+W M +F V PM M +NQ A
Sbjct: 184 HTACEMIWLRKFMTEFGFVQPGPMPMHCDNQDA 216
>ref|XP_020262928.1| uncharacterized protein LOC109838913 [Asparagus officinalis]
Length = 238
Score = 61.2 bits (147), Expect(4) = 1e-30
Identities = 36/70 (51%), Positives = 45/70 (64%), Gaps = 6/70 (8%)
Frame = -2
Query: 310 PRKGLIYKKHRHTMI*-----GYAKNVNDR*SMTGYYTYVGRNLVTWKSKKAKYCS*IK- 149
P KGL +KKH HT I GYA ++ D+ S +G+ T+VG NLVTW+SKK S
Sbjct: 112 PGKGLRHKKHVHTHISAFSDAGYAGDMGDQKSTSGFCTFVGGNLVTWRSKKQDVVSRSSA 171
Query: 148 HAKYRAMAHT 119
A+YRAMAHT
Sbjct: 172 EAEYRAMAHT 181
Score = 56.6 bits (135), Expect(4) = 1e-30
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = -1
Query: 653 LGKPKYFLGIEAAYQRKCIAFSQCKYALNLFKETEMLGCKPIQTPMAQN 507
+GKPKYFL IE AY++ + SQ KY L+L +E +L CKP TPM N
Sbjct: 1 MGKPKYFLRIEVAYKKHDMLLSQKKYVLDLLEEAGLLECKPASTPMEAN 49
Score = 43.1 bits (100), Expect(4) = 1e-30
Identities = 23/53 (43%), Positives = 34/53 (64%)
Frame = -3
Query: 474 LVDSTKYRRPFEKLIYLTVTGPDIAYSDGLVSQLIQKPQKPH*EILMRIL*YI 316
L D+ +YRR KLIYLTVT PDI ++ G ++ KP++ H ++IL Y+
Sbjct: 60 LDDAARYRRLIGKLIYLTVTRPDITFTVG----VMHKPREVHWTAALKILAYV 108
Score = 42.0 bits (97), Expect(4) = 1e-30
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = -1
Query: 122 YTACEMMWFHNLMQDFNIVCTDPMAMLYNNQAAIFVASN 6
+TACEM+W M +F V PM + +NQ+AI++A N
Sbjct: 180 HTACEMVWLRKFMTEFGFVQPGPMPIHCDNQSAIYIAQN 218
>gb|PRQ31964.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1480
Score = 64.3 bits (155), Expect(4) = 2e-30
Identities = 35/69 (50%), Positives = 44/69 (63%), Gaps = 6/69 (8%)
Frame = -2
Query: 313 APRKGLIYKKHRHTMI*GY-----AKNVNDR*SMTGYYTYVGRNLVTWKSKKAKYCS*IK 149
AP KGL++ KH H + GY A N+ DR S +GY+T+VG NLVTWKSKK K +
Sbjct: 1012 APGKGLLFSKHSHLDVSGYTDADWAGNITDRRSTSGYFTFVGGNLVTWKSKKQKVVARSS 1071
Query: 148 -HAKYRAMA 125
A+YR MA
Sbjct: 1072 AEAEYRGMA 1080
Score = 60.5 bits (145), Expect(4) = 2e-30
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = -1
Query: 677 SKDTSKKDLGKPKYFLGIEAAYQRKCIAFSQCKYALNLFKETEMLGCKPIQTPMAQN 507
S + KDLG KYFLGIE A + CI SQ KY L+L ET ML +P+ TP+ QN
Sbjct: 890 SLEFEMKDLGNLKYFLGIEVARGKDCIVLSQRKYVLDLLAETGMLDSQPVDTPIEQN 946
Score = 45.1 bits (105), Expect(4) = 2e-30
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Frame = -3
Query: 483 YYELVDSTK--YRRPFEKLIYLTVTGPDIAYSDGLVSQLIQKPQKPH*EILMRIL*YI 316
Y++ V + K Y+R + IYL+ T PD+AY+ +VSQ + P K H + + RIL Y+
Sbjct: 952 YFDQVPTNKARYQRLVGRFIYLSHTRPDLAYAVSVVSQFMHNPSKTHMDAVFRILRYL 1009
Score = 32.0 bits (71), Expect(4) = 2e-30
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 113 CEMMWFHNLMQDFNIVCTDPMAMLYNNQAAIFVASN 6
CE++W NL++D M + +N+AAI +A N
Sbjct: 1084 CELLWLRNLLRDLGFRQEKAMQLYCDNKAAIEIAHN 1119
>ref|XP_020258690.1| uncharacterized protein LOC109835105 [Asparagus officinalis]
Length = 262
Score = 62.0 bits (149), Expect(4) = 1e-29
Identities = 36/70 (51%), Positives = 44/70 (62%), Gaps = 6/70 (8%)
Frame = -2
Query: 310 PRKGLIYKKHRHTMI*-----GYAKNVNDR*SMTGYYTYVGRNLVTWKSKKAKYCS*IK- 149
P K L+YKKH HT I GYA ++ DR S + + T+VG NLVTW+SKK S
Sbjct: 116 PSKRLLYKKHEHTHILAFSDAGYAGDMGDRKSTSRFCTFVGGNLVTWRSKKQDVVSRSSA 175
Query: 148 HAKYRAMAHT 119
A+YRAMAHT
Sbjct: 176 EAEYRAMAHT 185
Score = 52.4 bits (124), Expect(4) = 1e-29
Identities = 24/49 (48%), Positives = 31/49 (63%)
Frame = -1
Query: 653 LGKPKYFLGIEAAYQRKCIAFSQCKYALNLFKETEMLGCKPIQTPMAQN 507
+GKPKYF IE AY++ + SQ KY L+L +E +L CK TPM N
Sbjct: 1 MGKPKYFFRIEVAYKKHGLLLSQRKYVLDLLEEAGLLECKSASTPMEAN 49
Score = 52.0 bits (123), Expect(4) = 1e-29
Identities = 24/53 (45%), Positives = 38/53 (71%)
Frame = -3
Query: 474 LVDSTKYRRPFEKLIYLTVTGPDIAYSDGLVSQLIQKPQKPH*EILMRIL*YI 316
L D+ +YRR KLIYLTVT PDI ++ G++S+ + KP++ H + ++IL Y+
Sbjct: 60 LDDAARYRRLIGKLIYLTVTRPDITFAVGVLSRFMHKPREVHWKTALKILAYV 112
Score = 33.1 bits (74), Expect(4) = 1e-29
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 122 YTACEMMWFHNLMQDFNIVCTDPMAMLYNNQAA 24
+TACEM+W M + V + PM M +NQ A
Sbjct: 184 HTACEMVWLRKFMTELGFVQSGPMPMHCDNQDA 216
>gb|PRQ35370.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1132
Score = 63.2 bits (152), Expect(4) = 1e-29
Identities = 34/69 (49%), Positives = 44/69 (63%), Gaps = 6/69 (8%)
Frame = -2
Query: 313 APRKGLIYKKHRHTMI*GY-----AKNVNDR*SMTGYYTYVGRNLVTWKSKKAKYCS*IK 149
AP KGL++ KH H + GY A N+ DR S +GY+T+VG NLVTWKSKK K +
Sbjct: 959 APGKGLLFSKHSHLDVSGYTDADWAGNITDRRSTSGYFTFVGGNLVTWKSKKQKVVARSS 1018
Query: 148 -HAKYRAMA 125
A+Y+ MA
Sbjct: 1019 AEAEYKGMA 1027
Score = 60.1 bits (144), Expect(4) = 1e-29
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = -1
Query: 677 SKDTSKKDLGKPKYFLGIEAAYQRKCIAFSQCKYALNLFKETEMLGCKPIQTPMAQN 507
S + KDLG KYFLGIE A + CI SQ KY L+L ET ML +P+ TP+ QN
Sbjct: 837 SLEFEMKDLGNLKYFLGIEVARGKDCIMLSQRKYVLDLLAETGMLDSQPVDTPIEQN 893
Score = 45.4 bits (106), Expect(4) = 1e-29
Identities = 21/51 (41%), Positives = 33/51 (64%)
Frame = -3
Query: 468 DSTKYRRPFEKLIYLTVTGPDIAYSDGLVSQLIQKPQKPH*EILMRIL*YI 316
+ +Y+R +LIYL+ T PD+AY+ +VSQ + P K H + + RIL Y+
Sbjct: 906 NKARYQRLVGRLIYLSHTRPDLAYAVSVVSQFMHNPSKTHMDAVFRILRYL 956
Score = 30.4 bits (67), Expect(4) = 1e-29
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 113 CEMMWFHNLMQDFNIVCTDPMAMLYNNQAAIFVASN 6
CE++W NL++D M + +N+A I +A N
Sbjct: 1031 CELLWLRNLLRDLGFRQEKAMQLYCDNKATIEIAHN 1066
>emb|CAN73101.1| hypothetical protein VITISV_042890 [Vitis vinifera]
Length = 772
Score = 65.1 bits (157), Expect(4) = 1e-29
Identities = 31/51 (60%), Positives = 36/51 (70%)
Frame = -1
Query: 659 KDLGKPKYFLGIEAAYQRKCIAFSQCKYALNLFKETEMLGCKPIQTPMAQN 507
KDLGK KYFLGIE A + FSQ KYAL++ +ET ML CKP+ TPM N
Sbjct: 483 KDLGKLKYFLGIEIAQSSSGVVFSQRKYALDILEETGMLDCKPVDTPMDPN 533
Score = 49.3 bits (116), Expect(4) = 1e-29
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = -3
Query: 474 LVDSTKYRRPFEKLIYLTVTGPDIAYSDGLVSQLIQKPQKPH*EILMRIL*YI 316
L D +YRR KL YLT+T PDI++ +VSQ +Q P H ++++RIL YI
Sbjct: 544 LGDPGRYRRLVGKLNYLTITRPDISFPVSVVSQFLQSPCDSHWDVVIRILRYI 596
Score = 49.3 bits (116), Expect(4) = 1e-29
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Frame = -2
Query: 310 PRKGLIYKKHRHTMI*GY-----AKNVNDR*SMTGYYTYVGRNLVTWKSKKAKYCS*IK- 149
P +G++Y+ HT + GY A + DR S +GY ++G NL++WKSKK +
Sbjct: 600 PGQGVLYENRGHTQVVGYTDADWAGSPTDRRSTSGYCVFIGGNLISWKSKKQDVVARSSA 659
Query: 148 HAKYRAMA 125
A+YRAMA
Sbjct: 660 EAEYRAMA 667
Score = 35.4 bits (80), Expect(4) = 1e-29
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = -1
Query: 113 CEMMWFHNLMQDFNIVCTDPMAMLYNNQAAIFVASN 6
CE++W +L+Q+ + M ++ +NQAA+ +ASN
Sbjct: 671 CELIWLRHLLQELRFGNDEQMKLICDNQAALHIASN 706
>emb|CAN72440.1| hypothetical protein VITISV_039162 [Vitis vinifera]
Length = 1253
Score = 63.5 bits (153), Expect(4) = 2e-29
Identities = 30/51 (58%), Positives = 35/51 (68%)
Frame = -1
Query: 659 KDLGKPKYFLGIEAAYQRKCIAFSQCKYALNLFKETEMLGCKPIQTPMAQN 507
KDLGK KYFLGIE A + SQ KYAL++ +ET ML CKP+ TPM N
Sbjct: 964 KDLGKLKYFLGIEIAQSSSXVVLSQRKYALDILEETGMLDCKPVDTPMDPN 1014
Score = 48.1 bits (113), Expect(4) = 2e-29
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Frame = -2
Query: 310 PRKGLIYKKHRHTMI*GYAK-----NVNDR*SMTGYYTYVGRNLVTWKSKKAKYCS*IK- 149
P +G++Y+ HT + GY + DR S +GY ++G NL++WKSKK +
Sbjct: 1081 PGQGVLYENRGHTQVVGYTDADWVGSPTDRRSTSGYCVFIGGNLISWKSKKQDVVARSSA 1140
Query: 148 HAKYRAMA 125
A+YRAMA
Sbjct: 1141 EAEYRAMA 1148
Score = 47.8 bits (112), Expect(4) = 2e-29
Identities = 25/53 (47%), Positives = 34/53 (64%)
Frame = -3
Query: 474 LVDSTKYRRPFEKLIYLTVTGPDIAYSDGLVSQLIQKPQKPH*EILMRIL*YI 316
L D +YRR KL YLT+T PDI++ +VSQ +Q P H + ++RIL YI
Sbjct: 1025 LGDPGRYRRLVGKLNYLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYI 1077
Score = 38.9 bits (89), Expect(4) = 2e-29
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = -1
Query: 113 CEMMWFHNLMQDFNIVCTDPMAMLYNNQAAIFVASN 6
CE++W +L+Q+ + M ++Y+NQAA+ +ASN
Sbjct: 1152 CELIWLRHLLQELRFGKDEQMKLIYDNQAALHIASN 1187
>ref|XP_023905091.1| uncharacterized protein LOC112016851 [Quercus suber]
Length = 390
Score = 57.4 bits (137), Expect(4) = 3e-29
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 6/71 (8%)
Frame = -2
Query: 313 APRKGLIYKKHRHTMI*GY-----AKNVNDR*SMTGYYTYVGRNLVTWKSKKAKYCS*IK 149
AP G++Y+++ H + G+ A + +DR S TGY T++G NLVTWKSKK +
Sbjct: 217 APGLGILYRRNGHLRVEGFTDADWAGSPSDRRSTTGYCTFLGGNLVTWKSKKETVVARSS 276
Query: 148 -HAKYRAMAHT 119
A+YRAMAHT
Sbjct: 277 AEAEYRAMAHT 287
Score = 56.6 bits (135), Expect(4) = 3e-29
Identities = 28/52 (53%), Positives = 34/52 (65%)
Frame = -1
Query: 659 KDLGKPKYFLGIEAAYQRKCIAFSQCKYALNLFKETEMLGCKPIQTPMAQNK 504
KDLGK +YFLGIE A R I SQ KY L+L E +LG +P+ TPM N+
Sbjct: 101 KDLGKLRYFLGIEVARSRTGINLSQRKYVLDLLDEMGLLGARPVDTPMDPNQ 152
Score = 48.9 bits (115), Expect(4) = 3e-29
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = -3
Query: 468 DSTKYRRPFEKLIYLTVTGPDIAYSDGLVSQLIQKPQKPH*EILMRIL*YI 316
D ++YRR KL YLT+T PDI+Y+ +V Q ++ P PH + + RI+ Y+
Sbjct: 164 DPSRYRRLVGKLNYLTITRPDISYAVSVVGQFLEAPSVPHWDAVTRIVRYL 214
Score = 35.4 bits (80), Expect(4) = 3e-29
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -1
Query: 122 YTACEMMWFHNLMQDFNIVCTDPMAMLYNNQAAIFVASN 6
+TA E+ W + +Q+ PM +NQAA+ +ASN
Sbjct: 286 HTASELTWLQHFLQEIGFSAPTPMEFFCDNQAALHIASN 324
>gb|PRQ56600.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1518
Score = 65.1 bits (157), Expect(4) = 3e-29
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = -1
Query: 677 SKDTSKKDLGKPKYFLGIEAAYQRKCIAFSQCKYALNLFKETEMLGCKPIQTPMAQN 507
S + KDLG KYFLGIE A + CI SQ KY L+L ET ML C+P+ TP+ QN
Sbjct: 1254 SSEFEMKDLGSLKYFLGIEVARGKDCIVLSQRKYVLDLLAETGMLDCQPVDTPIEQN 1310
Score = 60.1 bits (144), Expect(4) = 3e-29
Identities = 30/54 (55%), Positives = 37/54 (68%), Gaps = 5/54 (9%)
Frame = -2
Query: 313 APRKGLIYKKHRHTMI*GY-----AKNVNDR*SMTGYYTYVGRNLVTWKSKKAK 167
AP KGLI+ K+ H + GY A N+ DR S +GY+T+VG NLVTWKSKK K
Sbjct: 1376 APGKGLIFSKYSHLDVSGYTDADWAGNITDRRSTSGYFTFVGGNLVTWKSKKQK 1429
Score = 39.3 bits (90), Expect(4) = 3e-29
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = -3
Query: 483 YYELVDSTK--YRRPFEKLIYLTVTGPDIAYSDGLVSQLIQKPQKPH*EILMRIL*YI 316
Y + V ++K Y+R +LIYL+ T PD+AY+ +VSQ + P + H + IL Y+
Sbjct: 1316 YLDQVPTSKARYQRLVGRLIYLSHTRPDLAYAVSVVSQFMHNPSEAHMGAVFCILGYL 1373
Score = 33.5 bits (75), Expect(4) = 3e-29
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 113 CEMMWFHNLMQDFNIVCTDPMAMLYNNQAAIFVASN 6
CEM+W NL++D M + +N+AAI +A N
Sbjct: 1448 CEMLWLRNLLRDLGFKQKKAMPLYCDNKAAIEIAHN 1483
>emb|CAN79672.1| hypothetical protein VITISV_012210 [Vitis vinifera]
Length = 1211
Score = 60.5 bits (145), Expect(4) = 3e-29
Identities = 30/51 (58%), Positives = 34/51 (66%)
Frame = -1
Query: 659 KDLGKPKYFLGIEAAYQRKCIAFSQCKYALNLFKETEMLGCKPIQTPMAQN 507
K+LGK KY LGIE A + SQ KYAL++ KET ML CKPI TPM N
Sbjct: 922 KNLGKLKYLLGIEIAQSSSGVVLSQRKYALDILKETGMLDCKPIDTPMDPN 972
Score = 50.1 bits (118), Expect(4) = 3e-29
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Frame = -2
Query: 310 PRKGLIYKKHRHTMI*GY-----AKNVNDR*SMTGYYTYVGRNLVTWKSKKAKYCS*IK- 149
P +G++Y+ HT + GY A + DR S +GY ++G NL++WKSKK +
Sbjct: 1039 PGQGVLYENKGHTQVVGYTDADWAGSPIDRRSTSGYCVFIGGNLISWKSKKQDVVARSSA 1098
Query: 148 HAKYRAMAHT 119
AKYRAMA T
Sbjct: 1099 EAKYRAMALT 1108
Score = 49.7 bits (117), Expect(4) = 3e-29
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = -3
Query: 474 LVDSTKYRRPFEKLIYLTVTGPDIAYSDGLVSQLIQKPQKPH*EILMRIL*YI 316
L D +YRR KL YLT+T PDI++ +VSQ +Q P H ++++RIL YI
Sbjct: 983 LGDPRRYRRLVGKLNYLTITRPDISFPVSVVSQFLQSPCDSHWDVVIRILQYI 1035
Score = 37.7 bits (86), Expect(4) = 3e-29
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = -1
Query: 119 TACEMMWFHNLMQDFNIVCTDPMAMLYNNQAAIFVASN 6
T CE++W +L+++ + M ++ NNQAA+ +ASN
Sbjct: 1108 TTCELIWLRHLLRELRFGKDEQMKLICNNQAALHIASN 1145
>gb|KYP34729.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1180
Score = 60.1 bits (144), Expect(4) = 4e-29
Identities = 29/56 (51%), Positives = 36/56 (64%)
Frame = -1
Query: 674 KDTSKKDLGKPKYFLGIEAAYQRKCIAFSQCKYALNLFKETEMLGCKPIQTPMAQN 507
K KDLG +YFLGIE A + IA SQ KYAL++ +ET + CKP+ TPM N
Sbjct: 903 KHFQTKDLGPLRYFLGIEVAQSKSGIAISQRKYALDILEETGLTDCKPVDTPMDPN 958
Score = 57.8 bits (138), Expect(4) = 4e-29
Identities = 33/71 (46%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Frame = -2
Query: 313 APRKGLIYKKHRHTMI*GY-----AKNVNDR*SMTGYYTYVGRNLVTWKSKKAKYCS*IK 149
+P KGL+Y HT I GY A + +DR S +GY ++G NLV+WKSKK +
Sbjct: 1024 SPGKGLVYNDRGHTNIVGYSDADWAGDASDRRSTSGYCVFMGGNLVSWKSKKQSVIARSS 1083
Query: 148 -HAKYRAMAHT 119
A+YRAMAHT
Sbjct: 1084 TEAEYRAMAHT 1094
Score = 43.5 bits (101), Expect(4) = 4e-29
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = -3
Query: 468 DSTKYRRPFEKLIYLTVTGPDIAYSDGLVSQLIQKPQKPH*EILMRIL*YI 316
D +YRR KL YLT+T PDI++ +VSQ + P + H ++RIL YI
Sbjct: 971 DPGRYRRLVGKLNYLTMTRPDISFPVSVVSQFLNSPCESHWLAVVRILRYI 1021
Score = 36.2 bits (82), Expect(4) = 4e-29
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = -1
Query: 122 YTACEMMWFHNLMQDFNIVCTDPMAMLYNNQAAIFVASN 6
+T CE++W L+Q+F M ++ +NQ+A++++SN
Sbjct: 1093 HTTCELLWLKFLIQEFQFCKVGHMELVCDNQSALYLSSN 1131
>gb|KYP74866.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 343
Score = 65.1 bits (157), Expect(4) = 6e-29
Identities = 32/62 (51%), Positives = 38/62 (61%)
Frame = -1
Query: 659 KDLGKPKYFLGIEAAYQRKCIAFSQCKYALNLFKETEMLGCKPIQTPMAQNKNNIHLIYT 480
K LG KYFLGIE A + I Q KY L+L ET MLGCKP+ TP+ +N N H + T
Sbjct: 58 KQLGDLKYFLGIEVARSKHGIFICQRKYVLDLLTETGMLGCKPVDTPIEKNHKNFHCVGT 117
Query: 479 MS 474
S
Sbjct: 118 AS 119
Score = 55.1 bits (131), Expect(4) = 6e-29
Identities = 31/69 (44%), Positives = 41/69 (59%), Gaps = 6/69 (8%)
Frame = -2
Query: 313 APRKGLIYKKHRHTMI*GY-----AKNVNDR*SMTGYYTYVGRNLVTWKSKKAKYCS*IK 149
AP KGL++ H H + GY A + NDR S GY T+VG NLVTW+SKK + +
Sbjct: 174 APGKGLLFSNHGHLKVEGYTDADWAGSKNDRRSTAGYLTFVGGNLVTWRSKKQEVVARSS 233
Query: 148 -HAKYRAMA 125
A++R MA
Sbjct: 234 AEAEFRGMA 242
Score = 48.9 bits (115), Expect(4) = 6e-29
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = -3
Query: 468 DSTKYRRPFEKLIYLTVTGPDIAYSDGLVSQLIQKPQKPH*EILMRIL*YI 316
D +Y+R KLIYL+ T P+IAY+ +VSQ + P+KPH + + RIL Y+
Sbjct: 121 DKGRYQRLVGKLIYLSHTRPNIAYAVNVVSQFMHDPRKPHMDAVERILRYL 171
Score = 28.1 bits (61), Expect(4) = 6e-29
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -1
Query: 113 CEMMWFHNLMQDFNIVCTDPMAMLYNNQAAIFVASN 6
CE++W NL++D M + +N++AI +A+N
Sbjct: 246 CELLWIKNLLKDIGY----EMKLYCDNKSAIQIANN 277
>gb|KYP51683.1| Copia protein, partial [Cajanus cajan]
Length = 397
Score = 63.2 bits (152), Expect(4) = 9e-29
Identities = 29/52 (55%), Positives = 38/52 (73%)
Frame = -1
Query: 659 KDLGKPKYFLGIEAAYQRKCIAFSQCKYALNLFKETEMLGCKPIQTPMAQNK 504
KDLG +YFLGIE A ++ I SQ KYA+++ KET+ML CKPI +PM N+
Sbjct: 108 KDLGHLRYFLGIEVAQSKEGIVISQRKYAIDILKETDMLDCKPIDSPMDPNQ 159
Score = 52.8 bits (125), Expect(4) = 9e-29
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = -3
Query: 468 DSTKYRRPFEKLIYLTVTGPDIAYSDGLVSQLIQKPQKPH*EILMRIL*YI 316
D +YRR KLIYLT+T PD+ ++ G+VSQ +Q P H +++RIL YI
Sbjct: 171 DLERYRRLVGKLIYLTITRPDLCFAVGIVSQFMQAPHINHWNVVLRILRYI 221
Score = 45.1 bits (105), Expect(4) = 9e-29
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Frame = -2
Query: 313 APRKGLIYKKHRHTMI*GY-----AKNVNDR*SMTGYYTYVGRNLVTWKSKKAKYCS*IK 149
AP +GL+Y+ + I GY A DR S TGY ++G NL++WKSKK +
Sbjct: 224 APGQGLLYEDKGDSQISGYCDADWAGCPIDRRSTTGYCVFLGGNLISWKSKKQNVVARSS 283
Query: 148 -HAKYRAMA 125
A+YRAMA
Sbjct: 284 AEAEYRAMA 292
Score = 35.4 bits (80), Expect(4) = 9e-29
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 113 CEMMWFHNLMQDFNIVCTDPMAMLYNNQAAIFVASN 6
CE+MW L+Q+ PM + +NQ A+ +ASN
Sbjct: 296 CELMWIKQLLQELKFCEGHPMKLYCDNQVALHIASN 331
>gb|KYP44825.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1371
Score = 61.6 bits (148), Expect(4) = 1e-28
Identities = 29/52 (55%), Positives = 37/52 (71%)
Frame = -1
Query: 659 KDLGKPKYFLGIEAAYQRKCIAFSQCKYALNLFKETEMLGCKPIQTPMAQNK 504
KDLG +YFLGIE A ++ I SQ KYA+++ KET ML CKPI +PM N+
Sbjct: 1082 KDLGHLRYFLGIEVAQSKEGIVISQRKYAIDILKETGMLDCKPIDSPMDPNQ 1133
Score = 52.4 bits (124), Expect(4) = 1e-28
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = -3
Query: 468 DSTKYRRPFEKLIYLTVTGPDIAYSDGLVSQLIQKPQKPH*EILMRIL*YI 316
D +YRR KLIYLT+T PD++++ G+VSQ +Q P H ++RIL YI
Sbjct: 1145 DPERYRRLVGKLIYLTITRPDLSFAVGIVSQFMQAPHIDHWNAVLRILRYI 1195
Score = 46.6 bits (109), Expect(4) = 1e-28
Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Frame = -2
Query: 313 APRKGLIYKKHRHTMI*GY-----AKNVNDR*SMTGYYTYVGRNLVTWKSKKAKYCS*IK 149
AP +GL+Y+ + I GY A DR S TGY ++G NL++WKSKK +
Sbjct: 1198 APGQGLLYEDKGDSQISGYCDADWAGCPIDRRSTTGYCVFLGGNLISWKSKKQNVVARSS 1257
Query: 148 -HAKYRAMA 125
AKYRAMA
Sbjct: 1258 VEAKYRAMA 1266
Score = 35.4 bits (80), Expect(4) = 1e-28
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 113 CEMMWFHNLMQDFNIVCTDPMAMLYNNQAAIFVASN 6
CE+MW L+Q+ PM + +NQ A+ +ASN
Sbjct: 1270 CELMWIKQLLQELKFCEGHPMKLYCDNQVALHIASN 1305
>emb|CAN67925.1| hypothetical protein VITISV_021168 [Vitis vinifera]
Length = 1354
Score = 62.8 bits (151), Expect(4) = 1e-28
Identities = 30/51 (58%), Positives = 35/51 (68%)
Frame = -1
Query: 659 KDLGKPKYFLGIEAAYQRKCIAFSQCKYALNLFKETEMLGCKPIQTPMAQN 507
KDLGK KYFLGIE A + SQ KYAL++ +ET ML CKP+ TPM N
Sbjct: 1045 KDLGKLKYFLGIEIAQSSSGVVLSQRKYALDILEETGMLDCKPVDTPMDPN 1095
Score = 48.5 bits (114), Expect(4) = 1e-28
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Frame = -2
Query: 310 PRKGLIYKKHRHTMI*GY-----AKNVNDR*SMTGYYTYVGRNLVTWKSKKAKYCS*IK- 149
P +G++Y+ HT + GY A + DR S +GY ++G NL++WKSKK
Sbjct: 1162 PGQGVLYENRGHTQVVGYTDADWAGSPTDRRSTSGYCVFIGGNLISWKSKKQDVVXRSSA 1221
Query: 148 HAKYRAMA 125
A+YRAMA
Sbjct: 1222 EAEYRAMA 1229
Score = 47.8 bits (112), Expect(4) = 1e-28
Identities = 25/53 (47%), Positives = 34/53 (64%)
Frame = -3
Query: 474 LVDSTKYRRPFEKLIYLTVTGPDIAYSDGLVSQLIQKPQKPH*EILMRIL*YI 316
L D +YRR KL YLT+T PDI++ +VSQ +Q P H + ++RIL YI
Sbjct: 1106 LGDPGRYRRLVGKLNYLTITRPDISFPVSVVSQFLQSPCDSHWDAVIRILRYI 1158
Score = 37.0 bits (84), Expect(4) = 1e-28
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = -1
Query: 113 CEMMWFHNLMQDFNIVCTDPMAMLYNNQAAIFVASN 6
CE++W +L+Q+ I + M ++ +NQAA+ +ASN
Sbjct: 1233 CELIWLRHLLQELRIGKDEQMKLICDNQAALHIASN 1268
>gb|KYP58900.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 512
Score = 61.6 bits (148), Expect(4) = 1e-28
Identities = 29/52 (55%), Positives = 37/52 (71%)
Frame = -1
Query: 659 KDLGKPKYFLGIEAAYQRKCIAFSQCKYALNLFKETEMLGCKPIQTPMAQNK 504
KDLG +YFLGIE A ++ I SQ KYA+++ KET ML CKPI +PM N+
Sbjct: 223 KDLGHLRYFLGIEVAQSKEGIVISQRKYAIDILKETGMLDCKPIDSPMDPNQ 274
Score = 52.4 bits (124), Expect(4) = 1e-28
Identities = 25/51 (49%), Positives = 35/51 (68%)
Frame = -3
Query: 468 DSTKYRRPFEKLIYLTVTGPDIAYSDGLVSQLIQKPQKPH*EILMRIL*YI 316
D +YRR KLIYLT+T PD++++ G+VSQ +Q P H ++RIL YI
Sbjct: 286 DPERYRRLVGKLIYLTITRPDLSFAVGIVSQFMQAPHIDHWNAVLRILRYI 336
Score = 45.1 bits (105), Expect(4) = 1e-28
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Frame = -2
Query: 313 APRKGLIYKKHRHTMI*GY-----AKNVNDR*SMTGYYTYVGRNLVTWKSKKAKYCS*IK 149
AP +GL+Y+ + I GY A DR S TGY ++G NL++WKSKK +
Sbjct: 339 APGQGLLYEDKGDSQISGYCDADWAGCPIDRRSTTGYCVFLGGNLISWKSKKQNVVARSS 398
Query: 148 -HAKYRAMA 125
A+YRAMA
Sbjct: 399 AEAEYRAMA 407
Score = 37.0 bits (84), Expect(4) = 1e-28
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -1
Query: 113 CEMMWFHNLMQDFNIVCTDPMAMLYNNQAAIFVASN 6
CE+MW L+Q+ PM + +NQAA+ +ASN
Sbjct: 411 CELMWIKQLLQELKFCEGHPMKLYCDNQAALHIASN 446