BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00061568
         (496 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]                   157   3e-41
gb|ACH86210.1| unknown [Citrus yellow mosaic virus]                   151   1e-40
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]               151   2e-39
gb|ANK58548.1| polyprotein [Fig badnavirus 1]                         149   2e-38
gb|ANK58545.1| polyprotein [Fig badnavirus 1]                         149   2e-38
gb|ANK58542.1| polyprotein [Fig badnavirus 1]                         149   2e-38
gb|ANK58539.1| polyprotein [Fig badnavirus 1]                         149   2e-38
gb|ANK58536.1| polyprotein [Fig badnavirus 1]                         149   2e-38
ref|NP_569153.1| unknown [Citrus yellow mosaic virus] >gi|164169...   149   2e-38
gb|AER00544.1| ORF III [Citrus yellow mosaic virus]                   149   2e-38
gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]               149   2e-38
gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus]               146   1e-37
gb|AER00538.1| ORF III [Citrus yellow mosaic virus]                   146   1e-37
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] >gi|333493962...   146   2e-37
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]               145   3e-37
gb|ATZ69602.1| putative movement protein, partial [Cacao swollen...   134   5e-37
gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration...   144   6e-37
ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discolor...   144   9e-37
gb|ATZ69583.1| putative movement protein, partial [Cacao swollen...   133   9e-37
gb|ATZ69597.1| putative movement protein, partial [Cacao swollen...   133   1e-36

>gb|ATV81254.1| polyprotein [Grapevine badnavirus 1]
          Length = 1846

 Score =  157 bits (396), Expect = 3e-41
 Identities = 80/167 (47%), Positives = 113/167 (67%), Gaps = 3/167 (1%)
 Frame = +3

Query: 3   SIQTRGYENWQDGEANLLITSGVVGRLTNTPNAGFAYQVQNVTDYLASRGVRALPGRRFD 182
           SI TRGYENW++GEANLL+T GV+ RL+NTPN GFAYQ+Q+VTD+L SRGVRALPGRR+ 
Sbjct: 210 SILTRGYENWRNGEANLLVTRGVMARLSNTPNVGFAYQIQHVTDHLESRGVRALPGRRYS 269

Query: 183 VTEVQGRNWVIRPPRITAVRLPTEVQSRNLLNGNIHINFERYVSV---AEPARASTSQAL 353
             ++QG+NW+IR P+I     P+EV +RNL +G++ I F  Y      A PA     + +
Sbjct: 270 AEQIQGQNWIIRQPQINIPMRPSEVDTRNLYDGSVSIRFRDYAPTDEQATPAYNKHDEEI 329

Query: 354 NHEEEGALERGTHLLAVLIEDNPVYDTSHEDEDEYTYPIYDSEDEVS 494
           N +EE  ++   H++AVL E++  +DT  +   +Y + +  S  E S
Sbjct: 330 NEDEEELIQE-HHVIAVLTEEDR-WDTLGQPSGKYDFYVRYSAPESS 374


>gb|ACH86210.1| unknown [Citrus yellow mosaic virus]
          Length = 463

 Score =  151 bits (382), Expect = 1e-40
 Identities = 75/150 (50%), Positives = 103/150 (68%), Gaps = 6/150 (4%)
 Frame = +3

Query: 3   SIQTRGYENWQDGEANLLITSGVVGRLTNTPNAGFAYQVQNVTDYLASRGVRALPGRRFD 182
           SI T+GY NWQ+GEANLL+T G+VGRL+NTPN  FAYQ+QNVTDYL S G++ALPGRR+ 
Sbjct: 210 SILTKGYGNWQNGEANLLVTRGIVGRLSNTPNVAFAYQIQNVTDYLVSHGIQALPGRRYS 269

Query: 183 VTEVQGRNWVIRPPRITAVRL-PTEVQSRNLLNGNIHINFERYVSVAEPARASTSQALNH 359
             +VQG+ W +RP  I AV + PT V +RN+++G+I + F  Y    +PA  + +Q   H
Sbjct: 270 SADVQGQQWFLRPSNIPAVPMAPTNVDTRNMIDGSISLRFNSYQPAPDPAPVAYNQ---H 326

Query: 360 EEEGALERG-----THLLAVLIEDNPVYDT 434
           +EE  L+        H +A+  E+N V+DT
Sbjct: 327 DEEVPLDEDEEQIRNHTIALWREENEVWDT 356


>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1968

 Score =  151 bits (382), Expect = 2e-39
 Identities = 75/160 (46%), Positives = 107/160 (66%), Gaps = 6/160 (3%)
 Frame = +3

Query: 3   SIQTRGYENWQDGEANLLITSGVVGRLTNTPNAGFAYQVQNVTDYLASRGVRALPGRRFD 182
           SI T+GY NWQ+GEANLL+T G+VGRL+NTPN  FAYQ+QNVTDYL S G++ALPGRR+ 
Sbjct: 210 SILTKGYGNWQNGEANLLVTRGIVGRLSNTPNVAFAYQIQNVTDYLVSHGIQALPGRRYS 269

Query: 183 VTEVQGRNWVIRPPRITAVRL-PTEVQSRNLLNGNIHINFERYVSVAEPARASTSQALNH 359
             +VQG+ W +RP  I AV + PT V +RN+++G+I + F  Y    +PA  + +Q   H
Sbjct: 270 SADVQGQQWFLRPSNIPAVPMAPTNVDTRNMIDGSISLRFNSYQPAPDPAPVAYNQ---H 326

Query: 360 EEEGALERG-----THLLAVLIEDNPVYDTSHEDEDEYTY 464
           +EE  L+        H +A+  E++ V+DT  E   ++ +
Sbjct: 327 DEEVPLDEDEEQIRNHTIALWREEHEVWDTLGEPSGKFDF 366


>gb|ANK58548.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  149 bits (376), Expect = 2e-38
 Identities = 72/138 (52%), Positives = 96/138 (69%), Gaps = 3/138 (2%)
 Frame = +3

Query: 3   SIQTRGYENWQDGEANLLITSGVVGRLTNTPNAGFAYQVQNVTDYLASRGVRALPGRRFD 182
           SIQT GYENWQ+GEANLLIT G+ GRL+NTPN GFAY++ +VTDYLASRGV+ALPGRR+ 
Sbjct: 212 SIQTSGYENWQNGEANLLITRGMTGRLSNTPNVGFAYRISHVTDYLASRGVQALPGRRYR 271

Query: 183 VTEVQGRNWVIRPPRITAVRLPTEVQSRNLLNGNIHINFERYVSVAEPARA---STSQAL 353
              ++GRNW+IR P+I A  +P  V++RNL++G I   F  Y    EP +       + +
Sbjct: 272 SEMLRGRNWIIRQPQIQAAMMPRNVETRNLIDGTISARFADYTQAPEPRQPHYNEQDEEV 331

Query: 354 NHEEEGALERGTHLLAVL 407
             +EE   E   H++A+L
Sbjct: 332 ASDEEELAETQQHIVAML 349


>gb|ANK58545.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  149 bits (376), Expect = 2e-38
 Identities = 72/138 (52%), Positives = 96/138 (69%), Gaps = 3/138 (2%)
 Frame = +3

Query: 3   SIQTRGYENWQDGEANLLITSGVVGRLTNTPNAGFAYQVQNVTDYLASRGVRALPGRRFD 182
           SIQT GYENWQ+GEANLLIT G+ GRL+NTPN GFAY++ +VTDYLASRGV+ALPGRR+ 
Sbjct: 212 SIQTSGYENWQNGEANLLITRGMTGRLSNTPNVGFAYRISHVTDYLASRGVQALPGRRYR 271

Query: 183 VTEVQGRNWVIRPPRITAVRLPTEVQSRNLLNGNIHINFERYVSVAEPARA---STSQAL 353
              ++GRNW+IR P+I A  +P  V++RNL++G I   F  Y    EP +       + +
Sbjct: 272 SEMLRGRNWIIRQPQIQAAMMPRNVETRNLIDGTISARFADYTQAPEPRQPHYNEQDEEV 331

Query: 354 NHEEEGALERGTHLLAVL 407
             +EE   E   H++A+L
Sbjct: 332 ASDEEELAETQQHIVAML 349


>gb|ANK58542.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  149 bits (376), Expect = 2e-38
 Identities = 72/138 (52%), Positives = 96/138 (69%), Gaps = 3/138 (2%)
 Frame = +3

Query: 3   SIQTRGYENWQDGEANLLITSGVVGRLTNTPNAGFAYQVQNVTDYLASRGVRALPGRRFD 182
           SIQT GYENWQ+GEANLLIT G+ GRL+NTPN GFAY++ +VTDYLASRGV+ALPGRR+ 
Sbjct: 212 SIQTSGYENWQNGEANLLITRGMTGRLSNTPNVGFAYRISHVTDYLASRGVQALPGRRYR 271

Query: 183 VTEVQGRNWVIRPPRITAVRLPTEVQSRNLLNGNIHINFERYVSVAEPARA---STSQAL 353
              ++GRNW+IR P+I A  +P  V++RNL++G I   F  Y    EP +       + +
Sbjct: 272 SEMLRGRNWIIRQPQIQAAMMPRNVETRNLIDGTISARFADYTQAPEPRQPHYNEQDEEV 331

Query: 354 NHEEEGALERGTHLLAVL 407
             +EE   E   H++A+L
Sbjct: 332 ASDEEELAETQQHIVAML 349


>gb|ANK58539.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  149 bits (376), Expect = 2e-38
 Identities = 72/138 (52%), Positives = 96/138 (69%), Gaps = 3/138 (2%)
 Frame = +3

Query: 3   SIQTRGYENWQDGEANLLITSGVVGRLTNTPNAGFAYQVQNVTDYLASRGVRALPGRRFD 182
           SIQT GYENWQ+GEANLLIT G+ GRL+NTPN GFAY++ +VTDYLASRGV+ALPGRR+ 
Sbjct: 212 SIQTSGYENWQNGEANLLITRGMTGRLSNTPNVGFAYRISHVTDYLASRGVQALPGRRYR 271

Query: 183 VTEVQGRNWVIRPPRITAVRLPTEVQSRNLLNGNIHINFERYVSVAEPARA---STSQAL 353
              ++GRNW+IR P+I A  +P  V++RNL++G I   F  Y    EP +       + +
Sbjct: 272 SEMLRGRNWIIRQPQIQAAMMPRNVETRNLIDGTISARFADYTQAPEPRQPHYNEQDEEV 331

Query: 354 NHEEEGALERGTHLLAVL 407
             +EE   E   H++A+L
Sbjct: 332 ASDEEELAETQQHIVAML 349


>gb|ANK58536.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  149 bits (376), Expect = 2e-38
 Identities = 72/138 (52%), Positives = 96/138 (69%), Gaps = 3/138 (2%)
 Frame = +3

Query: 3   SIQTRGYENWQDGEANLLITSGVVGRLTNTPNAGFAYQVQNVTDYLASRGVRALPGRRFD 182
           SIQT GYENWQ+GEANLLIT G+ GRL+NTPN GFAY++ +VTDYLASRGV+ALPGRR+ 
Sbjct: 212 SIQTSGYENWQNGEANLLITRGMTGRLSNTPNVGFAYRISHVTDYLASRGVQALPGRRYR 271

Query: 183 VTEVQGRNWVIRPPRITAVRLPTEVQSRNLLNGNIHINFERYVSVAEPARA---STSQAL 353
              ++GRNW+IR P+I A  +P  V++RNL++G I   F  Y    EP +       + +
Sbjct: 272 SEMLRGRNWIIRQPQIQAAMMPRNVETRNLIDGTISARFADYTQAPEPRQPHYNEQDEEV 331

Query: 354 NHEEEGALERGTHLLAVL 407
             +EE   E   H++A+L
Sbjct: 332 ASDEEELAETQQHIVAML 349


>ref|NP_569153.1| unknown [Citrus yellow mosaic virus]
 gb|AAL18495.1|AF347695_3 unknown [Citrus yellow mosaic virus]
          Length = 1983

 Score =  149 bits (376), Expect = 2e-38
 Identities = 73/160 (45%), Positives = 105/160 (65%), Gaps = 6/160 (3%)
 Frame = +3

Query: 3   SIQTRGYENWQDGEANLLITSGVVGRLTNTPNAGFAYQVQNVTDYLASRGVRALPGRRFD 182
           SI T+GY NWQ+GEANLL+T G+VGRL+NTPN  FAYQ+QNVTDYL S G++ALPGRR+ 
Sbjct: 210 SILTKGYGNWQNGEANLLVTRGIVGRLSNTPNVAFAYQIQNVTDYLVSHGIQALPGRRYS 269

Query: 183 VTEVQGRNWVIRPPRITAVRL-PTEVQSRNLLNGNIHINFERYVSVAEPARASTSQALNH 359
             ++QG+ W +RP  I AV + PT V +RN+++G+I + F  Y    +P   + +Q   H
Sbjct: 270 TADIQGQQWFLRPSNIPAVPMAPTNVDTRNMIDGSISLRFNSYQPAPDPTPVAYNQ---H 326

Query: 360 EEEGALERG-----THLLAVLIEDNPVYDTSHEDEDEYTY 464
           +EE   +        H +A+  ED+ V+DT  E   ++ +
Sbjct: 327 DEEVPPDEDEEQIRNHTIALWREDDEVWDTLGEPSGKFDF 366


>gb|AER00544.1| ORF III [Citrus yellow mosaic virus]
          Length = 1976

 Score =  149 bits (375), Expect = 2e-38
 Identities = 74/160 (46%), Positives = 106/160 (66%), Gaps = 6/160 (3%)
 Frame = +3

Query: 3   SIQTRGYENWQDGEANLLITSGVVGRLTNTPNAGFAYQVQNVTDYLASRGVRALPGRRFD 182
           SI T+GY NWQ+GEANLL+T G+VGRL+NTPN  FAYQ+QNVTDYL S G++ALPGRR+ 
Sbjct: 210 SILTKGYGNWQNGEANLLVTRGIVGRLSNTPNVAFAYQIQNVTDYLVSHGIQALPGRRYS 269

Query: 183 VTEVQGRNWVIRPPRITAVRL-PTEVQSRNLLNGNIHINFERYVSVAEPARASTSQALNH 359
             +VQG+ W +RP  I AV + PT V +RN+++G+I + F  Y    +PA  + +Q   H
Sbjct: 270 AADVQGQQWFLRPSNIPAVPMAPTNVDTRNMIDGSISLRFNSYQPAPDPAPVAYNQ---H 326

Query: 360 EEEGALERG-----THLLAVLIEDNPVYDTSHEDEDEYTY 464
           +EE   +        H +A+  E++ V+DT  E   ++ +
Sbjct: 327 DEEIPPDEDEEQIRNHTIALWRENDEVWDTLGEPSGKFDF 366


>gb|ACB87156.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1979

 Score =  149 bits (375), Expect = 2e-38
 Identities = 74/160 (46%), Positives = 106/160 (66%), Gaps = 6/160 (3%)
 Frame = +3

Query: 3   SIQTRGYENWQDGEANLLITSGVVGRLTNTPNAGFAYQVQNVTDYLASRGVRALPGRRFD 182
           SI T+GY NWQ+GEANLL+T G+VGRL+NTPN  FAYQ+QNVTDYL S G++ALPGRR+ 
Sbjct: 210 SILTKGYGNWQNGEANLLVTRGIVGRLSNTPNVAFAYQIQNVTDYLVSHGIQALPGRRYS 269

Query: 183 VTEVQGRNWVIRPPRITAVRL-PTEVQSRNLLNGNIHINFERYVSVAEPARASTSQALNH 359
             +VQG+ W +RP  I AV + PT V +RN+++G+I + F  Y    +PA  + +Q   H
Sbjct: 270 AADVQGQQWFLRPSNIPAVPMAPTNVDTRNMIDGSISLRFNSYQPAPDPAPVAYNQ---H 326

Query: 360 EEEGALERG-----THLLAVLIEDNPVYDTSHEDEDEYTY 464
           +EE   +        H +A+  E++ V+DT  E   ++ +
Sbjct: 327 DEEIPPDEDEEQIRNHTIALWRENDEVWDTLGEPSGKFDF 366


>gb|ACB87150.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1976

 Score =  146 bits (369), Expect = 1e-37
 Identities = 73/160 (45%), Positives = 105/160 (65%), Gaps = 6/160 (3%)
 Frame = +3

Query: 3   SIQTRGYENWQDGEANLLITSGVVGRLTNTPNAGFAYQVQNVTDYLASRGVRALPGRRFD 182
           SI T+ Y NWQ+GEANLL+T G+VGRL+NTPN  FAYQ+QNVTDYL S G++ALPGRR+ 
Sbjct: 210 SILTKAYGNWQNGEANLLVTRGIVGRLSNTPNVAFAYQIQNVTDYLVSHGIQALPGRRYS 269

Query: 183 VTEVQGRNWVIRPPRITAVRL-PTEVQSRNLLNGNIHINFERYVSVAEPARASTSQALNH 359
             +VQG+ W +RP  I AV + PT V +RN+++G+I + F  Y    +PA  + +Q   H
Sbjct: 270 AADVQGQQWFLRPSNIPAVPMAPTNVDTRNMIDGSISLRFNSYQPAPDPAPVTYNQ---H 326

Query: 360 EEEGALERG-----THLLAVLIEDNPVYDTSHEDEDEYTY 464
           +EE   +        H +A+  E++ V+DT  E   ++ +
Sbjct: 327 DEEIPPDEDEEQIRNHTIALWRENDEVWDTLGEPSGKFDF 366


>gb|AER00538.1| ORF III [Citrus yellow mosaic virus]
          Length = 1982

 Score =  146 bits (369), Expect = 1e-37
 Identities = 73/160 (45%), Positives = 104/160 (65%), Gaps = 6/160 (3%)
 Frame = +3

Query: 3   SIQTRGYENWQDGEANLLITSGVVGRLTNTPNAGFAYQVQNVTDYLASRGVRALPGRRFD 182
           SI T+GY NWQ+GEANLL+T G+VGRL+NTPN  FAYQ+QNVTDYL S G++ALPGRR+ 
Sbjct: 210 SILTKGYGNWQNGEANLLVTRGIVGRLSNTPNVAFAYQIQNVTDYLVSHGIQALPGRRYS 269

Query: 183 VTEVQGRNWVIRPPRITAVRL-PTEVQSRNLLNGNIHINFERYVSVAEPARASTSQALNH 359
             +VQG+ W +RP  I AV + PT V +RN+++G+I + F  Y    +P   + +Q   H
Sbjct: 270 AADVQGQQWFLRPSNIPAVPMAPTNVGTRNMIDGSISLRFHSYQPAPDPTPVAYNQ---H 326

Query: 360 EEEGALERG-----THLLAVLIEDNPVYDTSHEDEDEYTY 464
           +EE   +        H +A+  ED+  +DT  E   ++ +
Sbjct: 327 DEEVPPDEDEEQIRNHTIALWREDDEEWDTLGEPSGKFDF 366


>ref|YP_006273075.1| polyprotein [Fig badnavirus 1]
 gb|AEF56561.1| polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  146 bits (368), Expect = 2e-37
 Identities = 71/138 (51%), Positives = 95/138 (68%), Gaps = 3/138 (2%)
 Frame = +3

Query: 3   SIQTRGYENWQDGEANLLITSGVVGRLTNTPNAGFAYQVQNVTDYLASRGVRALPGRRFD 182
           SIQT GYENWQ+GEANLLIT G+ GRL+NTPN GFAY++ +VTDYLASRGV+ALPGRR+ 
Sbjct: 212 SIQTSGYENWQNGEANLLITRGMTGRLSNTPNVGFAYRISHVTDYLASRGVQALPGRRYR 271

Query: 183 VTEVQGRNWVIRPPRITAVRLPTEVQSRNLLNGNIHINFERYVSVAEPARA---STSQAL 353
              ++GRNW+IR P+I A  +P  V++RNL++G I      Y    EP +       + +
Sbjct: 272 SEMLRGRNWIIRQPQIQAAMMPRNVETRNLIDGTISARSADYTQAPEPRQPHYNEQDEEV 331

Query: 354 NHEEEGALERGTHLLAVL 407
             +EE   E   H++A+L
Sbjct: 332 ASDEEELAETQQHIVAML 349


>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1967

 Score =  145 bits (367), Expect = 3e-37
 Identities = 74/160 (46%), Positives = 104/160 (65%), Gaps = 6/160 (3%)
 Frame = +3

Query: 3   SIQTRGYENWQDGEANLLITSGVVGRLTNTPNAGFAYQVQNVTDYLASRGVRALPGRRFD 182
           SI T+GY NWQ+GEANLL+T G+VGRL+NTP   FAYQ+QNVTDYL S G++ALPGRR+ 
Sbjct: 210 SILTKGYGNWQNGEANLLVTRGIVGRLSNTPIVAFAYQIQNVTDYLVSHGIQALPGRRYS 269

Query: 183 VTEVQGRNWVIRPPRITAVRL-PTEVQSRNLLNGNIHINFERYVSVAEPARASTSQALNH 359
             +VQG+ W +RP  I A  + PT V +RN+++G+I + F  Y    +PA  + +Q   H
Sbjct: 270 AADVQGQQWFLRPSNIPADPMAPTNVATRNMIDGSISLRFNSYQPAPDPAPIAYNQ---H 326

Query: 360 EEEGALERG-----THLLAVLIEDNPVYDTSHEDEDEYTY 464
           +EE   +        H+ A+  EDN V+DT  E   ++ +
Sbjct: 327 DEEIPPDEDEEQIRNHITALWREDNEVWDTLGEPSGKFDF 366


>gb|ATZ69602.1| putative movement protein, partial [Cacao swollen shoot Ghana N
           virus]
          Length = 161

 Score =  134 bits (337), Expect = 5e-37
 Identities = 67/140 (47%), Positives = 93/140 (66%), Gaps = 4/140 (2%)
 Frame = +3

Query: 3   SIQTRGYENWQDGEANLLITSGVVGRLTNTPNAGFAYQVQNVTDYLASRGVRALPGRRFD 182
           SI TRGYENWQ+GEANLLIT  + GRL+NTPN  FAYQ+ +VTDYLAS GV+A+ G+++D
Sbjct: 11  SILTRGYENWQNGEANLLITRSMTGRLSNTPNVAFAYQISDVTDYLASHGVKAIAGKKYD 70

Query: 183 VTEVQGRNWVIRPPRITAVRL-PTEVQSRNLLNGNIHINFERY---VSVAEPARASTSQA 350
           +  +QG+ WV+RPPR     + P  V++RNL++G+I + F  Y    S + P      + 
Sbjct: 71  LRGLQGQQWVLRPPRANITPMQPKAVETRNLVDGSISLRFHNYEAAPSTSRPTYNEQDEE 130

Query: 351 LNHEEEGALERGTHLLAVLI 410
           +  EEE  L    H++A  I
Sbjct: 131 VESEEESELRE--HIVAAWI 148


>gb|AMN88380.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
          Length = 1789

 Score =  144 bits (364), Expect = 6e-37
 Identities = 68/124 (54%), Positives = 91/124 (73%)
 Frame = +3

Query: 3   SIQTRGYENWQDGEANLLITSGVVGRLTNTPNAGFAYQVQNVTDYLASRGVRALPGRRFD 182
           SIQT GYE+WQ+GEANLLIT G+ GRL+NTPN GFAY++ +VTDYLASRGV+ALPGRR++
Sbjct: 213 SIQTTGYESWQNGEANLLITRGMTGRLSNTPNVGFAYRISHVTDYLASRGVQALPGRRYN 272

Query: 183 VTEVQGRNWVIRPPRITAVRLPTEVQSRNLLNGNIHINFERYVSVAEPARASTSQALNHE 362
              ++GRNW+IR P++    +P  VQ+ NLL+G+I   F  Y    EP +   ++   H+
Sbjct: 273 SDILRGRNWIIRQPQLQVTMMPRSVQTTNLLDGSISARFANYTQAPEPQQPCYNE---HD 329

Query: 363 EEGA 374
           EE A
Sbjct: 330 EEEA 333


>ref|YP_009140788.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
 emb|CDN68224.1| polyprotein [Grapevine roditis leaf discoloration-associated virus]
          Length = 1830

 Score =  144 bits (363), Expect = 9e-37
 Identities = 68/124 (54%), Positives = 90/124 (72%)
 Frame = +3

Query: 3   SIQTRGYENWQDGEANLLITSGVVGRLTNTPNAGFAYQVQNVTDYLASRGVRALPGRRFD 182
           SIQT GYE+WQ+GEANLLIT G+ GRL+NTPN GFAY++ +VTDYLASRGV+ALPGRR++
Sbjct: 215 SIQTTGYESWQNGEANLLITRGMTGRLSNTPNVGFAYRISHVTDYLASRGVQALPGRRYN 274

Query: 183 VTEVQGRNWVIRPPRITAVRLPTEVQSRNLLNGNIHINFERYVSVAEPARASTSQALNHE 362
              ++GRNW+IR P++    +P  VQ+ NLL+G+I   F  Y    EP +   +    H+
Sbjct: 275 SDMLRGRNWIIRQPQLQVTMMPRSVQTTNLLDGSISARFANYTQAPEPQQPRYN---GHD 331

Query: 363 EEGA 374
           EE A
Sbjct: 332 EEEA 335


>gb|ATZ69583.1| putative movement protein, partial [Cacao swollen shoot Ghana N
           virus]
          Length = 161

 Score =  133 bits (335), Expect = 9e-37
 Identities = 63/132 (47%), Positives = 92/132 (69%), Gaps = 1/132 (0%)
 Frame = +3

Query: 3   SIQTRGYENWQDGEANLLITSGVVGRLTNTPNAGFAYQVQNVTDYLASRGVRALPGRRFD 182
           SI TRGY+NWQ+GEANLLIT  + GRL+NTPN  FAYQ+ +VTDYLAS GV+A+ G+++D
Sbjct: 11  SILTRGYQNWQNGEANLLITRSMTGRLSNTPNVAFAYQISDVTDYLASHGVKAIAGKKYD 70

Query: 183 VTEVQGRNWVIRPPRITAVRL-PTEVQSRNLLNGNIHINFERYVSVAEPARASTSQALNH 359
           +  +QG+ WV+RPPR     + P  V++RNL++G+I + F  Y +    +R + ++   H
Sbjct: 71  LRGLQGQQWVLRPPRANITPMQPNAVETRNLVDGSISLRFHNYEAAPTTSRPTYNE---H 127

Query: 360 EEEGALERGTHL 395
           +EE   E  + L
Sbjct: 128 DEEAESEEESEL 139


>gb|ATZ69597.1| putative movement protein, partial [Cacao swollen shoot Ghana N
           virus]
          Length = 161

 Score =  133 bits (334), Expect = 1e-36
 Identities = 65/140 (46%), Positives = 94/140 (67%), Gaps = 4/140 (2%)
 Frame = +3

Query: 3   SIQTRGYENWQDGEANLLITSGVVGRLTNTPNAGFAYQVQNVTDYLASRGVRALPGRRFD 182
           SI TRGY+NWQ+GEANLLIT  + GRL+NTPN  FAYQ+ +VTDYLAS GV+A+ G+++D
Sbjct: 11  SILTRGYQNWQNGEANLLITRSMTGRLSNTPNVAFAYQISDVTDYLASHGVKAIAGKKYD 70

Query: 183 VTEVQGRNWVIRPPRITAVRL-PTEVQSRNLLNGNIHINFERY---VSVAEPARASTSQA 350
           +  +QG+ WV+RPPR     + P  V++RNL++G+I + F  Y    + + P      + 
Sbjct: 71  LRGLQGQQWVLRPPRANITPMQPNAVETRNLVDGSISLRFHNYEAAPTTSRPTYNEHDEE 130

Query: 351 LNHEEEGALERGTHLLAVLI 410
           +  EEE  L    H++AV +
Sbjct: 131 VESEEESELRE--HIVAVWV 148