BLASTX nr result

ID: Cheilocostus21_contig00061507 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cheilocostus21_contig00061507
         (527 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EHH58654.1| hypothetical protein EGM_08557, partial [Macaca f...    40   4e-06

>gb|EHH58654.1| hypothetical protein EGM_08557, partial [Macaca fascicularis]
          Length = 261

 Score = 39.7 bits (91), Expect(2) = 4e-06
 Identities = 22/61 (36%), Positives = 34/61 (55%)
 Frame = +2

Query: 41  IHIYMCVCINICTYIVHPHMHIGLISHFPNG*LDFHFVIL*I*YVCR*HMKLTLYICMCI 220
           ++IY+CVC+ +C YI + H HI   +H        H  I    YVC   + + +YIC+C+
Sbjct: 65  VYIYVCVCVCVCVYI-YTHTHIYTHTH-------THIYI--YIYVC---VCVCIYICVCV 111

Query: 221 Y 223
           Y
Sbjct: 112 Y 112



 Score = 38.5 bits (88), Expect(2) = 4e-06
 Identities = 29/117 (24%), Positives = 46/117 (39%), Gaps = 11/117 (9%)
 Frame = +3

Query: 201 YIYVCAYMHV-IYSHSKRDSKLNTCHSNEELLSKALAW*IGVCQYWYGWRDYRCLD*DIK 377
           +IY+  YM+V IY+H+     +  C              + VC Y Y             
Sbjct: 146 HIYIYIYMYVYIYTHTHTHIYIYIC--------------VCVCVYIY------------- 178

Query: 378 PCLHVHTYSDMYIDTHI*-----CICISANIYT*IYTC-----LYIHTRTYVKNHWH 518
            C++++ Y  +Y  TH       C+C+   IY  +        +YIHT  Y+  H H
Sbjct: 179 VCVYIYMYVYIYTHTHTHIYIYICVCVCVYIYVCVICVCVCVYIYIHTHIYIHTHTH 235


Top